Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 0.0e+00 1094.0 547 100.0
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 3.5e-220 768.5 548 75.2
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 3.7e-201 705.3 549 68.9
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 2.4e-200 702.6 549 68.7
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 4.0e-195 685.3 549 65.9
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 1.6e-183 646.7 547 64.4
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 2.3e-179 632.9 533 63.0
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 3.4e-178 629.0 548 63.3
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 9.8e-178 627.5 547 62.5
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 4.9e-177 625.2 546 61.5
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 1.4e-176 623.6 547 60.9
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 3.1e-176 622.5 534 62.0
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 7.0e-176 621.3 547 61.1
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 9.2e-176 620.9 548 61.5
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 1.2e-175 620.5 533 61.9
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 4.5e-175 618.6 547 61.8
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.0e-174 617.5 528 62.5
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 1.1e-173 614.0 531 62.1
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 1.9e-173 613.2 545 59.8
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 4.3e-173 612.1 549 60.8
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 5.6e-173 611.7 548 59.7
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 2.8e-172 609.4 529 62.6
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 4.7e-172 608.6 547 61.2
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 1.4e-171 607.1 530 60.9
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 1.4e-171 607.1 533 60.4
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 1.4e-171 607.1 529 61.4
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 5.2e-171 605.1 534 59.9
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 5.2e-171 605.1 533 60.2
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 2.0e-170 603.2 531 60.5
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 2.6e-170 602.8 532 61.1
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 3.4e-170 602.4 533 59.8
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 4.4e-170 602.1 547 58.5
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 2.9e-169 599.4 536 59.7
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 3.7e-169 599.0 547 58.0
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 8.3e-169 597.8 531 59.7
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 1.1e-168 597.4 547 59.2
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 1.1e-168 597.4 531 60.8
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 2.7e-167 592.8 532 59.2
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 3.5e-167 592.4 541 59.3
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 7.8e-167 591.3 529 59.7
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 3.3e-165 585.9 531 59.9
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 4.3e-165 585.5 547 59.2
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 1.2e-164 583.9 531 59.5
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 1.6e-164 583.6 536 58.0
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 6.2e-164 581.6 531 59.5
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 8.0e-164 581.3 546 58.6
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 8.0e-164 581.3 541 58.8
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 1.8e-163 580.1 529 59.0
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 2.3e-163 579.7 532 57.7
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 3.1e-163 579.3 548 58.2
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 3.1e-163 579.3 528 60.2
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 3.1e-163 579.3 564 56.6
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 4.0e-163 578.9 541 58.2
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 5.2e-163 578.6 529 59.0
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 5.2e-163 578.6 541 58.4
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 5.2e-163 578.6 528 61.0
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 9.8e-162 574.3 541 56.9
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 1.7e-161 573.5 531 59.1
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 1.7e-161 573.5 548 57.7
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 2.2e-161 573.2 522 59.4
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 1.1e-160 570.9 533 57.8
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 2.4e-160 569.7 531 58.6
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 5.4e-160 568.5 532 57.3
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 5.4e-160 568.5 531 57.6
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 5.4e-160 568.5 531 57.6
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 1.6e-159 567.0 532 57.9
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 1.6e-159 567.0 518 60.2
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 6.0e-159 565.1 553 57.1
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 2.3e-158 563.1 544 57.7
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 2.3e-158 563.1 532 57.3
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 3.9e-158 562.4 532 57.3
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 3.9e-158 562.4 532 57.3
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 3.9e-158 562.4 546 56.4
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 5.0e-158 562.0 531 57.4
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 5.0e-158 562.0 532 57.3
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 6.6e-158 561.6 532 57.5
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 6.6e-158 561.6 536 56.9
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 1.1e-157 560.8 532 56.0
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 1.1e-157 560.8 548 56.2
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 2.5e-157 559.7 547 56.3
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 4.3e-157 558.9 530 57.2
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 7.3e-157 558.1 545 54.9
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 1.6e-156 557.0 551 55.7
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 2.8e-156 556.2 528 56.2
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 6.2e-156 555.1 530 56.8
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 1.4e-155 553.9 531 56.5
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 5.2e-155 552.0 530 57.4
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 5.2e-155 552.0 530 57.4
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 1.5e-154 550.4 551 55.4
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 1.5e-154 550.4 529 54.8
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 7.5e-154 548.1 531 57.1
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 1.7e-153 547.0 532 55.8
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.2e-151 540.8 531 56.3
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 2.1e-151 540.0 531 56.1
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 3.5e-151 539.3 531 56.1
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 4.3e-149 532.3 530 56.0
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 1.6e-148 530.4 530 53.4
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 4.4e-146 522.3 331 78.5
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 3.6e-140 502.7 536 52.1
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 3.1e-139 499.6 525 52.6
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 4.4e-138 495.7 533 49.2
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 3.2e-136 489.6 533 49.5
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 1.5e-133 480.7 327 72.8
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 9.6e-133 478.0 540 49.3
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 7.1e-128 461.8 354 66.7
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 1.0e-126 458.0 531 46.5
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 2.6e-122 443.4 555 47.7
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 4.9e-121 439.1 534 46.6
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 5.3e-115 419.1 416 55.8
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 1.2e-114 417.9 533 43.0
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 1.2e-114 417.9 532 43.8
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 4.5e-114 416.0 335 64.8
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 4.3e-109 399.4 391 57.8
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 6.5e-105 385.6 536 40.1
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 3.3e-101 373.2 385 56.1
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 2.8e-100 370.2 530 43.2
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 5.9e-90 335.9 198 84.8
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 9.4e-72 275.4 183 74.3
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 4.7e-71 273.1 540 33.7
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 1.8e-67 261.2 291 50.5
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 4.1e-59 233.4 345 40.0
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 1.6e-58 231.5 137 82.5
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 7.3e-32 142.9 101 68.3
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 6.4e-28 129.8 91 69.2
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 6.4e-28 129.8 97 63.9
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 5.1e-25 120.2 85 68.2
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 4.5e-13 80.5 260 24.6
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 3.7e-07 60.8 95 41.1
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 1.4e-06 58.9 35 80.0


User provided reference genes

Program Settings