Gene: Carub.0001s3458
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0001s3458
- Transcript Identifier Carub.0001s3458.1
- Gene Type Coding gene
- Location scaffold_1 : 14825121-14826719 : negative
Gene Family Information
- ID HOM05D006203
- #Genes/#Species 128/98
- Phylogenetic origin
- ID ORTHO05D007675
- #Genes/#Species 128/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Carub.0001s3458.v1.1
- pacid 39230315
- synonym Carubv10009157m.g
Descriptions
- Description PTHR21290//PTHR21290:SF32 - SPHINGOMYELIN SYNTHETASE // SUBFAMILY NOT NAMED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042761 | ISO | PLAZA Integrative Orthology | very long-chain fatty acid biosynthetic process | AT1G43580 |
| GO:0009663 | ISO | PLAZA Integrative Orthology | plasmodesma organization | AT1G43580 |
| GO:0010497 | ISO | PLAZA Integrative Orthology | plasmodesmata-mediated intercellular transport | AT1G43580 |
| GO:0030148 | ISO | PLAZA Integrative Orthology | sphingolipid biosynthetic process | AT1G43580 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G43580 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR025749 | Sphingomyelin synthase-like domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |