Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12362 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 3.6e-62 241.5 130 100.0
vmacro09025 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 1.2e-38 163.3 79 96.2
vmacro10990 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 1.2e-38 163.3 79 96.2
Dinv26813 Davidia involucrata HOM05D003729 ORTHO05D004384 4.4e-36 154.8 79 88.6
Rhsim04G0111000 Rhododendron simsii HOM05D003729 ORTHO05D004384 9.8e-36 153.7 79 91.1
Actinidia38159 Actinidia chinensis HOM05D003729 ORTHO05D004384 2.9e-35 152.1 79 88.6
MBI04_g42401_MAGBIO Magnolia biondii HOM05D003729 ORTHO05D004384 2.9e-35 152.1 79 86.1
TAR629G1039 Trochodendron aralioides HOM05D003729 ORTHO05D004384 2.9e-35 152.1 79 87.3
CSS0000349 Camellia sinensis var. sinensis HOM05D003729 ORTHO05D004384 3.7e-35 151.8 79 87.3
CiPaw.09G047000 Carya illinoinensis HOM05D003729 ORTHO05D004384 4.9e-35 151.4 79 87.3
Dinv34365 Davidia involucrata HOM05D003729 ORTHO05D004384 4.9e-35 151.4 79 86.1
Hma1.2p1_0402F.1_g145090 Hydrangea macrophylla HOM05D003729 ORTHO05D004384 1.9e-34 149.4 79 86.1
Lj1A1094G13 Lonicera japonica HOM05D003729 ORTHO05D004384 9.2e-34 147.1 79 86.1
QL06p031735 Quercus lobata HOM05D003729 ORTHO05D004384 9.2e-34 147.1 79 86.1
Eucgr.B01227 Eucalyptus grandis HOM05D003729 ORTHO05D004384 2.1e-33 146.0 79 83.5
Prupe.8G004300 Prunus persica HOM05D003729 ORTHO05D004384 2.1e-33 146.0 79 83.5
DCAR_013638 Daucus carota HOM05D003729 ORTHO05D004384 7.8e-33 144.1 79 82.3
MSTRG.19814 Avicennia marina HOM05D003729 ORTHO05D004384 1.0e-32 143.7 79 83.5
Nn7g37723 Nelumbo nucifera HOM05D003729 ORTHO05D004384 1.0e-32 143.7 79 81.0
Cc06_g19080 Coffea canephora HOM05D003729 ORTHO05D004384 1.3e-32 143.3 79 84.8
Haze_16230 Corylus avellana HOM05D003729 ORTHO05D004384 1.3e-32 143.3 79 82.3
ATR0757G154 Amborella trichopoda HOM05D003729 ORTHO05D004384 1.7e-32 142.9 79 78.5
Cfa020012 Carpinus fangiana HOM05D003729 ORTHO05D004384 1.7e-32 142.9 79 82.3
FvH4_2g11640 Fragaria vesca HOM05D003729 ORTHO05D004384 1.7e-32 142.9 79 82.3
FAN15G2573 Fragaria x ananassa HOM05D003729 ORTHO05D004384 1.7e-32 142.9 79 82.3
FAN24G0230 Fragaria x ananassa HOM05D003729 ORTHO05D004384 1.7e-32 142.9 79 82.3
MD06G1011700 Malus domestica HOM05D003729 ORTHO05D004384 1.7e-32 142.9 79 82.3
Manes.15G116200 Manihot esculenta HOM05D003729 ORTHO05D004384 1.7e-32 142.9 79 81.0
HanXRQChr10g0311271 Helianthus annuus HOM05D003729 ORTHO05D004384 2.3e-32 142.5 79 81.0
Sc13g0001200 Simmondsia chinensis HOM05D003729 ORTHO05D004384 2.3e-32 142.5 79 82.3
RcHm_v2.0_Chr6g0270881 Rosa chinensis HOM05D003729 ORTHO05D004384 3.9e-32 141.7 79 81.0
ClCG09G015010 Citrullus lanatus HOM05D003729 ORTHO05D004384 6.6e-32 141.0 79 82.3
GSVIVG01033615001 Vitis vinifera HOM05D003729 ORTHO05D004384 6.6e-32 141.0 79 84.8
HanXRQChr12g0359771 Helianthus annuus HOM05D003729 ORTHO05D004384 1.5e-31 139.8 79 78.5
Lsat_1_v5_gn_5_75341 Lactuca sativa HOM05D003729 ORTHO05D004384 1.5e-31 139.8 79 78.5
Aqoxy3G00221 Aquilegia oxysepala HOM05D003729 ORTHO05D004384 2.5e-31 139.0 79 82.3
ECA234G1736 Erigeron canadensis HOM05D003729 ORTHO05D004384 3.3e-31 138.7 79 78.5
Sed0006249 Sechium edule HOM05D003729 ORTHO05D004384 4.3e-31 138.3 79 79.7
PGR031G2313 Punica granatum HOM05D003729 ORTHO05D004384 5.6e-31 137.9 79 81.0
Ah.04g151040 Amaranthus hybridus HOM05D003729 ORTHO05D004384 7.3e-31 137.5 79 78.5
Prupe.5G014500 Prunus persica HOM05D003729 ORTHO05D004384 9.5e-31 137.1 79 79.7
Nitab4.5_0000381g0340 Nicotiana tabacum HOM05D003729 ORTHO05D004384 1.2e-30 136.7 79 79.7
Nitab4.5_0005447g0050 Nicotiana tabacum HOM05D003729 ORTHO05D004384 1.2e-30 136.7 79 79.7
Phvul.004G146700 Phaseolus vulgaris HOM05D003729 ORTHO05D004384 1.2e-30 136.7 79 78.5
VMungo0464G0714 Vigna mungo HOM05D003729 ORTHO05D004384 1.2e-30 136.7 79 78.5
CsaV3_7G006250 Cucumis sativus L. HOM05D003729 ORTHO05D004384 1.6e-30 136.3 79 79.7
Ca_11233_v3 Cicer arietinum L. HOM05D003729 ORTHO05D004384 2.1e-30 136.0 79 78.5
Potri.016G037400 Populus trichocarpa HOM05D003729 ORTHO05D004384 2.1e-30 136.0 79 77.2
Glyma.09G171000 Glycine max HOM05D003729 ORTHO05D004384 2.8e-30 135.6 79 77.2
Sopen10g034990 Solanum pennellii HOM05D003729 ORTHO05D004384 2.8e-30 135.6 79 78.5
CAN.G1099.5 Capsicum annuum HOM05D003729 ORTHO05D004384 3.6e-30 135.2 79 78.5
EL10Ac3g07219 Beta vulgaris HOM05D003729 ORTHO05D004384 4.7e-30 134.8 79 74.7
AUR62023904 Chenopodium quinoa HOM05D003729 ORTHO05D004384 4.7e-30 134.8 79 75.9
Gohir.A11G307900 Gossypium hirsutum HOM05D003729 ORTHO05D004384 4.7e-30 134.8 79 75.9
Gohir.D11G323300 Gossypium hirsutum HOM05D003729 ORTHO05D004384 4.7e-30 134.8 79 75.9
Gorai.007G353300 Gossypium raimondii HOM05D003729 ORTHO05D004384 4.7e-30 134.8 79 75.9
SEGI_15849 Sequoiadendron giganteum HOM05D003729 ORTHO05D004384 4.7e-30 134.8 79 74.7
TPR.G32867 Trifolium pratense HOM05D003729 ORTHO05D004384 4.7e-30 134.8 79 79.7
COL.COLO4_31341 Corchorus olitorius HOM05D003729 ORTHO05D004384 6.2e-30 134.4 79 74.7
Glyma.07G106900 Glycine max HOM05D003729 ORTHO05D004384 8.1e-30 134.0 79 75.9
Atru.chr11.1446 Acer truncatum HOM05D003729 ORTHO05D004384 1.1e-29 133.7 79 74.7
Atru.chr11.1476 Acer truncatum HOM05D003729 ORTHO05D004384 1.1e-29 133.7 79 74.7
AUR62003735 Chenopodium quinoa HOM05D003729 ORTHO05D004384 1.1e-29 133.7 79 74.7
Ciclev10027979m.g Citrus clementina HOM05D003729 ORTHO05D004384 1.4e-29 133.3 79 73.4
Sabra16G0039300 Salix brachista HOM05D003729 ORTHO05D004384 1.4e-29 133.3 79 75.9
Sabra16G0044200 Salix brachista HOM05D003729 ORTHO05D004384 1.4e-29 133.3 79 75.9
Thecc.05G137800 Theobroma cacao HOM05D003729 ORTHO05D004384 1.8e-29 132.9 79 74.7
Thecc.05G138100 Theobroma cacao HOM05D003729 ORTHO05D004384 1.8e-29 132.9 79 74.7
Lalb_Chr06g0173631 Lupinus albus HOM05D003729 ORTHO05D004384 2.3e-29 132.5 79 77.2
arahy.Tifrunner.gnm1.ann1.HP2N24 Arachis hypogaea HOM05D003729 ORTHO05D004384 3.1e-29 132.1 79 75.9
arahy.Tifrunner.gnm1.ann1.UC9EW5 Arachis hypogaea HOM05D003729 ORTHO05D004384 3.1e-29 132.1 79 75.9
Peaxi162Scf00146g00613 Petunia axillaris HOM05D003729 ORTHO05D004384 4.0e-29 131.7 79 78.5
Haze_20209 Corylus avellana HOM05D003729 ORTHO05D004384 5.2e-29 131.3 79 78.5
PSO478G2512 Papaver somniferum HOM05D003729 ORTHO05D004384 5.2e-29 131.3 79 74.7
PSO782G2431 Papaver somniferum HOM05D003729 ORTHO05D004384 5.2e-29 131.3 79 74.7
Duzib106G1244 Durio zibethinus HOM05D003729 ORTHO05D004384 8.9e-29 130.6 79 74.7
Medtr2g081080 Medicago truncatula HOM05D003729 ORTHO05D004384 8.9e-29 130.6 79 74.7
Psat5g246840 Pisum sativum HOM05D003729 ORTHO05D004384 8.9e-29 130.6 79 75.9
Aa31LG10G11890 Aethionema arabicum HOM05D003729 ORTHO05D004384 1.5e-28 129.8 79 75.9
Haze_20213 Corylus avellana HOM05D003729 ORTHO05D004384 1.5e-28 129.8 79 77.2
unitig_27.g24938 Utricularia gibba HOM05D003729 ORTHO05D004384 1.5e-28 129.8 79 73.4
HPP92_002023 Vanilla planifolia HOM05D003729 ORTHO05D004384 1.5e-28 129.8 79 74.7
THA.LOC104802558 Tarenaya hassleriana HOM05D003729 ORTHO05D004384 2.0e-28 129.4 79 73.4
CARHR167140 Cardamine hirsuta HOM05D003729 ORTHO05D004384 2.6e-28 129.0 79 74.7
Lj6g0002169 Lotus japonicus HOM05D003729 ORTHO05D004384 2.6e-28 129.0 79 75.9
Sp5g05590 Schrenkiella parvula HOM05D003729 ORTHO05D004384 2.6e-28 129.0 79 74.7
Thecc.05G137400 Theobroma cacao HOM05D003729 ORTHO05D004384 3.4e-28 128.6 79 72.2
Migut.N03364 Erythranthe guttata HOM05D003729 ORTHO05D004384 4.4e-28 128.3 79 73.4
SMO334G0073 Selaginella moellendorffii HOM05D003729 ORTHO05D004384 4.4e-28 128.3 79 69.6
Lj1g0021267 Lotus japonicus HOM05D003729 ORTHO05D004384 5.8e-28 127.9 79 74.7
AL5G38440 Arabidopsis lyrata HOM05D003729 ORTHO05D004384 7.5e-28 127.5 79 73.4
Rhsim06G0100100 Rhododendron simsii HOM05D003729 ORTHO05D004384 7.5e-28 127.5 79 78.5
Carub.0005s2373 Capsella rubella HOM05D003729 ORTHO05D004384 9.9e-28 127.1 79 73.4
Thhalv10005807m.g Eutrema salsugineum HOM05D003729 ORTHO05D004384 1.3e-27 126.7 79 73.4
Zm00001eb373800 Zea mays HOM05D003729 ORTHO05D004384 1.3e-27 126.7 79 69.6
Zm00001eb378550 Zea mays HOM05D003729 ORTHO05D004384 1.3e-27 126.7 79 69.6
AT3G56990 Arabidopsis thaliana HOM05D003729 ORTHO05D004384 2.2e-27 125.9 79 73.4
BcaC07g40019 Brassica carinata HOM05D003729 ORTHO05D004384 2.2e-27 125.9 79 72.2
BcaC07g40088 Brassica carinata HOM05D003729 ORTHO05D004384 2.2e-27 125.9 79 72.2
A09p49920 Brassica napus HOM05D003729 ORTHO05D004384 2.2e-27 125.9 79 72.2
C08p32320 Brassica napus HOM05D003729 ORTHO05D004384 2.2e-27 125.9 79 72.2
BolC8t50846H Brassica oleracea HOM05D003729 ORTHO05D004384 2.2e-27 125.9 79 72.2
BraA09t40443Z Brassica rapa HOM05D003729 ORTHO05D004384 2.2e-27 125.9 79 72.2
SGA_v2.0_scaffold149G36565 Striga asiatica HOM05D003729 ORTHO05D004384 3.7e-27 125.2 77 74.0
Os06g0128400 Oryza sativa ssp. japonica HOM05D003729 ORTHO05D004384 2.4e-26 122.5 79 67.1
Oeu059338.2 Olea europaea HOM05D003729 ORTHO05D004384 6.0e-25 117.9 79 67.1
Mapoly0009s0077 Marchantia polymorpha HOM05D003729 ORTHO05D004384 7.8e-25 117.5 78 65.4
A07p23200 Brassica napus HOM05D003729 ORTHO05D004384 1.0e-24 117.1 85 65.9
BraA07t29984Z Brassica rapa HOM05D003729 ORTHO05D004384 1.0e-24 117.1 85 65.9
BcaC08g44817 Brassica carinata HOM05D003729 ORTHO05D004384 1.7e-24 116.3 85 64.7
BolC6t37563H Brassica oleracea HOM05D003729 ORTHO05D004384 1.7e-24 116.3 85 64.7
AagrBONN_evm.TU.Sc2ySwM_228.5647 Anthoceros agrestis HOM05D003729 ORTHO05D004384 3.9e-24 115.2 79 63.3
C06p24040 Brassica napus HOM05D003729 ORTHO05D004384 1.9e-23 112.8 85 64.7
SHI43747 Sapria himalayana HOM05D003729 ORTHO05D004384 4.3e-23 111.7 92 55.4
SHI44105 Sapria himalayana HOM05D003729 ORTHO05D004384 9.5e-23 110.5 79 62.0
CBR_g12410 Chara braunii HOM05D003729 ORTHO05D004384 2.1e-22 109.4 78 57.7
SHI45339 Sapria himalayana HOM05D003729 ORTHO05D004384 4.7e-22 108.2 79 59.5
Pp3c18_60 Physcomitrium patens HOM05D003729 ORTHO05D004384 1.8e-21 106.3 79 57.0
CANSAT64G1452 Cannabis sativa HOM05D003729 ORTHO05D004384 2.6e-20 102.4 80 62.5
PRCOL_00000752 Prasinoderma coloniale HOM05D003729 ORTHO05D004384 1.3e-19 100.1 75 58.7
Gohir.A07G111501 Gossypium hirsutum HOM05D003729 ORTHO05D004384 8.4e-19 97.4 57 73.7
Gohir.D02G195125 Gossypium hirsutum HOM05D003729 ORTHO05D004384 8.4e-19 97.4 57 73.7
Gohir.D05G190600 Gossypium hirsutum HOM05D003729 ORTHO05D004384 8.4e-19 97.4 57 73.7
Gohir.D06G065600 Gossypium hirsutum HOM05D003729 ORTHO05D004384 8.4e-19 97.4 57 73.7
MCO06G073 Micromonas commoda HOM05D003729 ORTHO05D004384 2.4e-18 95.9 78 55.1
AUR62016564 Chenopodium quinoa HOM05D003729 ORTHO05D004384 7.1e-18 94.4 54 75.9
Cre03.g159950 Chlamydomonas reinhardtii HOM05D003729 ORTHO05D004384 1.2e-17 93.6 78 55.1
SHI40172 Sapria himalayana HOM05D003729 ORTHO05D004384 7.8e-17 90.9 111 43.2
SHI42965 Sapria himalayana HOM05D003729 ORTHO05D004384 2.4e-13 79.3 55 63.6
Cfa025239 Carpinus fangiana HOM05D003729 ORTHO05D004384 3.5e-09 65.5 91 39.6
BcaB02g07627 Brassica carinata HOM05D003729 ORTHO05D004384 4.3e-07 58.5 59 52.5
SHI46975 Sapria himalayana HOM05D003729 ORTHO05D004384 5.6e-07 58.2 79 40.5


User provided reference genes

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