Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11675 Vaccinium macrocarpon HOM05D000198 ORTHO05D023800 3.0e-54 214.9 109 100.0
vmacro22501 Vaccinium macrocarpon HOM05D000198 ORTHO05D023800 3.0e-54 214.9 109 100.0
Rhsim06G0244300 Rhododendron simsii HOM05D000198 ORTHO05D005702 8.3e-20 100.5 81 66.7
Actinidia12753 Actinidia chinensis HOM05D000198 ORTHO05D005702 1.9e-16 89.4 81 60.5
Medtr2g067660 Medicago truncatula HOM05D000198 ORTHO05D005702 5.6e-16 87.8 92 56.5
CSS0002476 Camellia sinensis var. sinensis HOM05D000198 ORTHO05D005702 7.3e-16 87.4 81 59.3
Ca_03179_v3 Cicer arietinum L. HOM05D000198 ORTHO05D005702 9.5e-16 87.0 92 54.3
Sc06g0002010 Simmondsia chinensis HOM05D000198 ORTHO05D005702 1.6e-15 86.3 81 55.6
Psat1g015240 Pisum sativum HOM05D000198 ORTHO05D005702 2.1e-15 85.9 92 54.3
AL2G40050 Arabidopsis lyrata HOM05D000198 ORTHO05D005702 2.8e-15 85.5 79 57.0
Cfa019371 Carpinus fangiana HOM05D000198 ORTHO05D005702 6.1e-15 84.3 84 56.0
Haze_07763 Corylus avellana HOM05D000198 ORTHO05D005702 6.1e-15 84.3 84 56.0
Glyma.08G163700 Glycine max HOM05D000198 ORTHO05D005702 6.1e-15 84.3 92 53.3
Lalb_Chr20g0108421 Lupinus albus HOM05D000198 ORTHO05D005702 6.1e-15 84.3 79 58.2
Carub.0002s2630 Capsella rubella HOM05D000198 ORTHO05D005702 8.0e-15 84.0 79 55.7
Dinv42461 Davidia involucrata HOM05D000198 ORTHO05D005702 1.4e-14 83.2 81 56.8
Duzib213G0040 Durio zibethinus HOM05D000198 ORTHO05D005702 1.4e-14 83.2 84 56.0
Hma1.2p1_0334F.1_g128390 Hydrangea macrophylla HOM05D000198 ORTHO05D005702 1.8e-14 82.8 92 50.0
Hma1.2p1_1896F.1_g306840 Hydrangea macrophylla HOM05D000198 ORTHO05D005702 1.8e-14 82.8 92 50.0
Nitab4.5_0013063g0020 Nicotiana tabacum HOM05D000198 ORTHO05D005702 1.8e-14 82.8 57 70.2
PGR031G3164 Punica granatum HOM05D000198 ORTHO05D005702 1.8e-14 82.8 81 54.3
Sopen09g033640 Solanum pennellii HOM05D000198 ORTHO05D005702 1.8e-14 82.8 57 70.2
PGSC0003DMG400017144 Solanum tuberosum HOM05D000198 ORTHO05D005702 1.8e-14 82.8 57 70.2
AUR62039633 Chenopodium quinoa HOM05D000198 ORTHO05D005702 2.3e-14 82.4 81 54.3
Eucgr.F04474 Eucalyptus grandis HOM05D000198 ORTHO05D005702 2.3e-14 82.4 58 69.0
A07p44510 Brassica napus HOM05D000198 ORTHO05D005702 3.0e-14 82.0 79 53.2
C06p53340 Brassica napus HOM05D000198 ORTHO05D005702 3.0e-14 82.0 79 53.2
BolC6t40351H Brassica oleracea HOM05D000198 ORTHO05D005702 3.0e-14 82.0 79 53.2
BraA07t31961Z Brassica rapa HOM05D000198 ORTHO05D005702 3.0e-14 82.0 79 53.2
AUR62024987 Chenopodium quinoa HOM05D000198 ORTHO05D005702 3.0e-14 82.0 81 53.1
Glyma.15G263500 Glycine max HOM05D000198 ORTHO05D005702 3.0e-14 82.0 92 51.1
HanXRQChr11g0335861 Helianthus annuus HOM05D000198 ORTHO05D005702 3.0e-14 82.0 81 53.1
Peaxi162Scf00117g00003 Petunia axillaris HOM05D000198 ORTHO05D005702 3.0e-14 82.0 57 70.2
Phvul.005G048150 Phaseolus vulgaris HOM05D000198 ORTHO05D005702 3.0e-14 82.0 92 52.2
Sabra10G0133900 Salix brachista HOM05D000198 ORTHO05D005702 3.0e-14 82.0 79 57.0
Solyc09g090700.1 Solanum lycopersicum HOM05D000198 ORTHO05D005702 3.0e-14 82.0 57 70.2
TPR.G28436 Trifolium pratense HOM05D000198 ORTHO05D005702 3.0e-14 82.0 94 53.2
Gohir.A01G100200 Gossypium hirsutum HOM05D000198 ORTHO05D005702 4.0e-14 81.6 84 53.6
Potri.010G174000 Populus trichocarpa HOM05D000198 ORTHO05D005702 4.0e-14 81.6 79 55.7
Thecc.07G192200 Theobroma cacao HOM05D000198 ORTHO05D005702 4.0e-14 81.6 84 53.6
ClCG02G018730 Citrullus lanatus HOM05D000198 ORTHO05D005702 5.2e-14 81.3 79 54.4
Nitab4.5_0000194g0150 Nicotiana tabacum HOM05D000198 ORTHO05D005702 5.2e-14 81.3 57 68.4
Peaxi162Scf00153g00189 Petunia axillaris HOM05D000198 ORTHO05D005702 5.2e-14 81.3 84 53.6
Prupe.4G128100 Prunus persica HOM05D000198 ORTHO05D005702 5.2e-14 81.3 78 56.4
AT1G79440 Arabidopsis thaliana HOM05D000198 ORTHO05D005702 6.8e-14 80.9 79 53.2
CAN.G524.27 Capsicum annuum HOM05D000198 ORTHO05D005702 6.8e-14 80.9 57 70.2
Thhalv10018394m.g Eutrema salsugineum HOM05D000198 ORTHO05D005702 6.8e-14 80.9 78 53.8
Lj2A9G44 Lonicera japonica HOM05D000198 ORTHO05D005702 6.8e-14 80.9 81 54.3
Lalb_Chr25g0284351 Lupinus albus HOM05D000198 ORTHO05D005702 6.8e-14 80.9 84 53.6
QL04p094021 Quercus lobata HOM05D000198 ORTHO05D005702 6.8e-14 80.9 51 76.5
MELO3C019622.2 Cucumis melo HOM05D000198 ORTHO05D005702 8.9e-14 80.5 57 68.4
CsaV3_6G013440 Cucumis sativus L. HOM05D000198 ORTHO05D005702 8.9e-14 80.5 57 68.4
FvH4_3g14080 Fragaria vesca HOM05D000198 ORTHO05D005702 8.9e-14 80.5 78 56.4
FAN11G1157 Fragaria x ananassa HOM05D000198 ORTHO05D005702 8.9e-14 80.5 78 56.4
FAN16G0643 Fragaria x ananassa HOM05D000198 ORTHO05D005702 8.9e-14 80.5 78 56.4
FAN21G2180 Fragaria x ananassa HOM05D000198 ORTHO05D005702 8.9e-14 80.5 78 56.4
FAN25G1729 Fragaria x ananassa HOM05D000198 ORTHO05D005702 8.9e-14 80.5 78 56.4
THA.LOC104808138 Tarenaya hassleriana HOM05D000198 ORTHO05D005702 8.9e-14 80.5 57 66.7
MSTRG.7092 Avicennia marina HOM05D000198 ORTHO05D005702 1.2e-13 80.1 84 52.4
Duzib268G0428 Durio zibethinus HOM05D000198 ORTHO05D005702 1.2e-13 80.1 78 56.4
Lj3g0005942 Lotus japonicus HOM05D000198 ORTHO05D005702 1.2e-13 80.1 92 51.1
Manes.16G048100 Manihot esculenta HOM05D000198 ORTHO05D005702 1.2e-13 80.1 81 54.3
RcHm_v2.0_Chr5g0023391 Rosa chinensis HOM05D000198 ORTHO05D005702 1.2e-13 80.1 78 55.1
Gorai.002G110500 Gossypium raimondii HOM05D000198 ORTHO05D005702 1.5e-13 79.7 84 52.4
Nn8g40255 Nelumbo nucifera HOM05D000198 ORTHO05D005702 1.5e-13 79.7 84 51.2
Hund12032 Selenicereus undatus HOM05D000198 ORTHO05D005702 1.5e-13 79.7 84 51.2
Aqoxy1G01365 Aquilegia oxysepala HOM05D000198 ORTHO05D005702 2.0e-13 79.3 53 69.8
CiPaw.11G057000 Carya illinoinensis HOM05D000198 ORTHO05D005702 2.0e-13 79.3 57 68.4
Sp5g34490 Schrenkiella parvula HOM05D000198 ORTHO05D005702 2.0e-13 79.3 79 51.9
TAR626G1240 Trochodendron aralioides HOM05D000198 ORTHO05D005702 2.0e-13 79.3 85 56.5
Gohir.D01G084900 Gossypium hirsutum HOM05D000198 ORTHO05D005702 2.6e-13 79.0 84 51.2
Sed0009726 Sechium edule HOM05D000198 ORTHO05D005702 2.6e-13 79.0 84 51.2
TWI38G0157 Tripterygium wilfordii HOM05D000198 ORTHO05D005702 2.6e-13 79.0 84 51.2
Aa31LG4G1580 Aethionema arabicum HOM05D000198 ORTHO05D005702 3.4e-13 78.6 78 51.3
arahy.Tifrunner.gnm1.ann1.15VWWC Arachis hypogaea HOM05D000198 ORTHO05D005702 3.4e-13 78.6 57 70.2
DCAR_004554 Daucus carota HOM05D000198 ORTHO05D005702 3.4e-13 78.6 57 66.7
DCAR_032012 Daucus carota HOM05D000198 ORTHO05D005702 3.4e-13 78.6 84 50.0
ECA236G0201 Erigeron canadensis HOM05D000198 ORTHO05D005702 3.4e-13 78.6 81 54.3
TWI38G1970 Tripterygium wilfordii HOM05D000198 ORTHO05D005702 3.4e-13 78.6 84 51.2
GSVIVG01036719001 Vitis vinifera HOM05D000198 ORTHO05D005702 3.4e-13 78.6 57 70.2
Ah.02g111790 Amaranthus hybridus HOM05D000198 ORTHO05D005702 4.4e-13 78.2 84 51.2
arahy.Tifrunner.gnm1.ann1.D1NSDN Arachis hypogaea HOM05D000198 ORTHO05D005702 4.4e-13 78.2 57 70.2
Migut.M01503 Erythranthe guttata HOM05D000198 ORTHO05D005702 4.4e-13 78.2 53 73.6
SGA_v2.0_scaffold7G03629 Striga asiatica HOM05D000198 ORTHO05D005702 4.4e-13 78.2 53 69.8
Lsat_1_v5_gn_7_110980 Lactuca sativa HOM05D000198 ORTHO05D005702 5.8e-13 77.8 81 50.6
HanXRQChr07g0190721 Helianthus annuus HOM05D000198 ORTHO05D005702 7.5e-13 77.4 57 64.9
HanXRQChr13g0419821 Helianthus annuus HOM05D000198 ORTHO05D005702 7.5e-13 77.4 57 64.9
MD10G1216600 Malus domestica HOM05D000198 ORTHO05D005702 1.3e-12 76.6 78 53.8
unitig_26.g10057 Utricularia gibba HOM05D000198 ORTHO05D005702 1.3e-12 76.6 84 51.2
EL10Ac2g03290 Beta vulgaris HOM05D000198 ORTHO05D005702 2.2e-12 75.9 57 63.2
CDE06G0595 Ceratophyllum demersum HOM05D000198 ORTHO05D005702 2.9e-12 75.5 56 66.1
Cc05_g16560 Coffea canephora HOM05D000198 ORTHO05D005702 2.9e-12 75.5 81 54.3
HanXRQChr11g0335841 Helianthus annuus HOM05D000198 ORTHO05D005702 3.7e-12 75.1 81 50.6
HanXRQChr11g0335851 Helianthus annuus HOM05D000198 ORTHO05D005702 3.7e-12 75.1 81 50.6
MD05G1238300 Malus domestica HOM05D000198 ORTHO05D005702 4.9e-12 74.7 78 52.6
PSO384G4748 Papaver somniferum HOM05D000198 ORTHO05D005702 4.9e-12 74.7 57 64.9
Atru.chr1.55 Acer truncatum HOM05D000198 ORTHO05D005702 6.4e-12 74.3 57 61.4
CANSAT56G2629 Cannabis sativa HOM05D000198 ORTHO05D005702 6.4e-12 74.3 84 50.0
CANSAT56G4341 Cannabis sativa HOM05D000198 ORTHO05D005702 6.4e-12 74.3 84 50.0
HanXRQChr07g0190661 Helianthus annuus HOM05D000198 ORTHO05D005702 6.4e-12 74.3 81 51.9
Zm00001eb207050 Zea mays HOM05D000198 ORTHO05D005702 6.4e-12 74.3 57 63.2
GSVIVG01036720001 Vitis vinifera HOM05D000198 ORTHO05D005702 8.3e-12 73.9 58 65.5
Ciclev10004713m.g Citrus clementina HOM05D000198 ORTHO05D005702 1.1e-11 73.6 57 61.4
GSVIVG01036721001 Vitis vinifera HOM05D000198 ORTHO05D005702 1.1e-11 73.6 57 57.9
SHI33378 Sapria himalayana HOM05D000198 ORTHO05D005702 1.4e-11 73.2 58 63.8
Zm00001eb233300 Zea mays HOM05D000198 ORTHO05D005702 1.4e-11 73.2 57 63.2
ATR0697G108 Amborella trichopoda HOM05D000198 ORTHO05D005702 2.4e-11 72.4 53 64.2
unitig_749.g13692 Utricularia gibba HOM05D000198 ORTHO05D005702 9.2e-11 70.5 57 61.4
SalBow8G1239 Salvia bowleyana HOM05D000198 ORTHO05D005702 1.2e-10 70.1 82 50.0
SMO364G0446 Selaginella moellendorffii HOM05D000198 ORTHO05D005702 2.7e-10 68.9 53 64.2
AagrBONN_evm.TU.Sc2ySwM_228.3765 Anthoceros agrestis HOM05D000198 ORTHO05D005702 1.0e-09 67.0 53 64.2
Pp3c6_27580 Physcomitrium patens HOM05D000198 ORTHO05D005702 1.3e-09 66.6 57 54.4
Mapoly0091s0004 Marchantia polymorpha HOM05D000198 ORTHO05D005702 1.7e-09 66.2 84 42.9
SGA_v2.0_scaffold7G03666 Striga asiatica HOM05D000198 ORTHO05D005702 1.7e-09 66.2 41 73.2
Actinidia26209 Actinidia chinensis HOM05D000198 ORTHO05D005702 3.0e-09 65.5 37 86.5
Pp3c26_10950 Physcomitrium patens HOM05D000198 ORTHO05D005702 1.5e-08 63.2 57 50.9
Pp3c26_10958 Physcomitrium patens HOM05D000198 ORTHO05D005702 1.5e-08 63.2 57 50.9
MSTRG.16090 Avicennia marina HOM05D000198 ORTHO05D023800 1.2e-07 60.1 40 72.5
Lj4g0028073 Lotus japonicus HOM05D000198 ORTHO05D023800 1.6e-07 59.7 44 68.2
Lj4g0016796 Lotus japonicus HOM05D000198 ORTHO05D023800 4.0e-06 55.1 41 68.3
Cfa027216 Carpinus fangiana HOM05D000198 ORTHO05D005702 8.9e-06 53.9 63 44.4


User provided reference genes

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