Gene: AT1G79440

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G79440
  • Transcript Identifier AT1G79440.1
  • Gene Type Coding gene
  • Location Chr1 : 29882525-29887275 : negative

Gene Family Information

  • ID HOM05D000198
  • #Genes/#Species 1975/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G79440.1
  • symbol ALDH5F1
  • Alias ENF1,ENLARGED FIL EXPRESSION DOMAIN 1,SSADH1,SUCCINIC SEMIALDEHYDE DEHYDROGENASE 1,SSADH,SUCCINIC SEMIALDEHYDE DEHYDROGENASE
  • uniprot Q9SAK4

Descriptions

  • Description aldehyde dehydrogenase 5F1
  • Computational description aldehyde dehydrogenase 5F1 (ALDH5F1); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, NAD or NADH binding, copper ion binding, succinate-semialdehyde dehydrogenase activity; INVOLVED IN: in 6 processes; LOCATED IN: mitochondrion, chloroplast, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160), Succinic semialdehyde dehydrogenase (InterPro:IPR010102); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B4 (TAIR:AT3G48000.1); Has 62487 Blast hits to 62143 proteins in 3037 species: Archae - 481; Bacteria - 36218; Metazoa - 2614; Fungi - 2131; Plants - 1502; Viruses - 0; Other Eukaryotes - 19541 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048366
IMP
Gene Ontologyleaf development1
GO:0048825
IMP
Gene Ontologycotyledon development1
GO:0010492
IMP
Gene Ontologymaintenance of shoot apical meristem identity1
GO:0009450
IDA
IEA
Gene Ontologygamma-aminobutyric acid catabolic process2
GO:0009450
IEA
InterProgamma-aminobutyric acid catabolic process
GO:0009416
IMP
Gene Ontologyresponse to light stimulus3
GO:0006540
IDA, IMP
Gene Ontologyglutamate decarboxylation to succinate2 4
GO:0009408
IMP
Gene Ontologyresponse to heat3
GO:0072593
IMP
Gene Ontologyreactive oxygen species metabolic process4
GO:0009409
IEP
Gene Ontologyresponse to cold5
GO:1902074
IEP
Gene Ontologyresponse to salt6
GO:0009943
IMP
Gene Ontologyadaxial/abaxial axis specification1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005507
IDA
GOA Databasecopper ion binding
GO:0005507
HDA
Gene Ontologycopper ion binding7
GO:0004777
ISA
IEA
GOA Databasesuccinate-semialdehyde dehydrogenase (NAD+) activity
GO:0004777
IDA
ISS, IBA
Gene Ontologysuccinate-semialdehyde dehydrogenase (NAD+) activity2 8
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity
GO:0009013
IEA
GOA Databasesuccinate-semialdehyde dehydrogenase [NAD(P)+] activity
GO:0009013
IEA
InterProsuccinate-semialdehyde dehydrogenase [NAD(P)+] activity
GO:0016620
IEA
GOA Databaseoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0016620
IEA
InterProoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0051287
IDA
Gene OntologyNAD binding9

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
HDA
Gene Ontologycytosol10
GO:0005759
IEA
GOA Databasemitochondrial matrix
GO:0005759
IDA
Gene Ontologymitochondrial matrix2
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma11
GO:0005739
IDA
IEA
GOA Databasemitochondrion
GO:0005739
HDA
Gene Ontologymitochondrion12
GO:0009507
IDA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast13

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010102 Succinate semialdehyde dehydrogenase
IPR015590 Aldehyde dehydrogenase domain
IPR016163 Aldehyde dehydrogenase, C-terminal
IPR016161 Aldehyde/histidinol dehydrogenase
IPR016162 Aldehyde dehydrogenase, N-terminal
Mapman id Description
4.2.2.2.1 Amino acid metabolism.degradation.gamma-aminobutyrate (GABA).succinate formation.NAD-dependent succinic semialdehyde dehydrogenase