Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11322 Vaccinium macrocarpon HOM05D004737 ORTHO05D005623 2.3e-93 345.5 171 100.0
Rhsim02G0228600 Rhododendron simsii HOM05D004737 ORTHO05D005623 3.4e-84 315.1 171 88.3
CSS0013453 Camellia sinensis var. sinensis HOM05D004737 ORTHO05D005623 1.6e-78 296.2 171 84.2
Dinv38949 Davidia involucrata HOM05D004737 ORTHO05D005623 6.1e-78 294.3 169 83.4
Hma1.2p1_0896F.1_g233940 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 1.2e-76 290.0 169 81.7
Lj8A232T63 Lonicera japonica HOM05D004737 ORTHO05D005623 9.2e-74 280.4 168 78.6
GSVIVG01019762001 Vitis vinifera HOM05D004737 ORTHO05D005623 3.5e-73 278.5 164 80.5
QL12p034148 Quercus lobata HOM05D004737 ORTHO05D005623 2.3e-72 275.8 169 78.1
QL12p033263 Quercus lobata HOM05D004737 ORTHO05D005623 1.5e-71 273.1 169 77.5
QL12p034065 Quercus lobata HOM05D004737 ORTHO05D005623 1.5e-71 273.1 169 77.5
TAR625G0056 Trochodendron aralioides HOM05D004737 ORTHO05D005623 1.2e-70 270.0 167 76.6
QL12p034121 Quercus lobata HOM05D000005 ORTHO05D000833 3.6e-70 268.5 169 76.3
EL10Ac6g13984 Beta vulgaris HOM05D004737 ORTHO05D005623 4.7e-70 268.1 163 76.7
Potri.001G104800 Populus trichocarpa HOM05D004737 ORTHO05D005623 1.0e-69 266.9 169 72.2
RcHm_v2.0_Chr7g0197851 Rosa chinensis HOM05D004737 ORTHO05D005623 1.8e-69 266.2 167 77.2
TWI38G1747 Tripterygium wilfordii HOM05D004737 ORTHO05D005623 4.0e-69 265.0 169 74.0
MD14G1103600 Malus domestica HOM05D004737 ORTHO05D005623 5.2e-69 264.6 164 78.0
Cc08_g14650 Coffea canephora HOM05D004737 ORTHO05D005623 8.9e-69 263.8 164 78.0
CsaV3_5G002870 Cucumis sativus L. HOM05D004737 ORTHO05D005623 1.5e-68 263.1 162 75.3
Manes.02G022400 Manihot esculenta HOM05D004737 ORTHO05D005623 2.6e-68 262.3 164 76.2
Prupe.5G098900 Prunus persica HOM05D004737 ORTHO05D005623 5.8e-68 261.2 162 76.5
Duzib084G0936 Durio zibethinus HOM05D004737 ORTHO05D005623 9.8e-68 260.4 169 72.8
MSTRG.25602 Avicennia marina HOM05D004737 ORTHO05D005623 8.3e-67 257.3 164 75.0
Nitab4.5_0001215g0220 Nicotiana tabacum HOM05D004737 ORTHO05D005623 8.3e-67 257.3 165 74.5
Nitab4.5_0010794g0020 Nicotiana tabacum HOM05D004737 ORTHO05D005623 8.3e-67 257.3 165 74.5
SalBow5G1266 Salvia bowleyana HOM05D004737 ORTHO05D005623 1.1e-66 256.9 166 72.3
Thecc.03G277700 Theobroma cacao HOM05D004737 ORTHO05D005623 1.6e-65 253.1 187 66.8
MELO3C005669.2 Cucumis melo HOM05D004737 ORTHO05D005623 2.7e-65 252.3 162 73.5
Gohir.D08G200800 Gossypium hirsutum HOM05D004737 ORTHO05D005623 2.7e-65 252.3 162 74.7
Gorai.004G211600 Gossypium raimondii HOM05D004737 ORTHO05D005623 2.7e-65 252.3 162 74.7
AUR62010668 Chenopodium quinoa HOM05D004737 ORTHO05D005623 7.8e-65 250.8 163 73.0
Sabra01G0079500 Salix brachista HOM05D004737 ORTHO05D005623 1.0e-64 250.4 204 61.3
AUR62017215 Chenopodium quinoa HOM05D004737 ORTHO05D005623 1.3e-64 250.0 163 72.4
Gohir.A08G182200 Gossypium hirsutum HOM05D004737 ORTHO05D005623 2.3e-64 249.2 162 74.7
PGR042G1084 Punica granatum HOM05D004737 ORTHO05D005623 2.3e-64 249.2 170 71.2
SGA_v2.0_scaffold253G45138 Striga asiatica HOM05D004737 ORTHO05D005623 3.9e-64 248.4 164 71.3
Nn5g30495 Nelumbo nucifera HOM05D004737 ORTHO05D005623 5.0e-64 248.1 167 73.1
Sed0019193 Sechium edule HOM05D004737 ORTHO05D005623 1.5e-63 246.5 162 72.8
Haze_08850 Corylus avellana HOM05D004737 ORTHO05D005623 4.3e-63 245.0 154 76.0
Haze_08864 Corylus avellana HOM05D004737 ORTHO05D005623 4.3e-63 245.0 154 76.0
DCAR_008401 Daucus carota HOM05D004737 ORTHO05D005623 1.2e-62 243.4 154 74.0
Lsat_1_v5_gn_3_7380 Lactuca sativa HOM05D004737 ORTHO05D005623 8.0e-62 240.7 164 70.1
ECA246G0717 Erigeron canadensis HOM05D004737 ORTHO05D005623 1.4e-61 240.0 170 67.1
Eucgr.E00582 Eucalyptus grandis HOM05D004737 ORTHO05D005623 1.4e-61 240.0 170 69.4
VMungo1215G1017 Vigna mungo HOM05D004737 ORTHO05D005623 1.4e-61 240.0 165 70.9
Hma1.2p1_0896F.1_g233950 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 2.3e-61 239.2 169 71.6
PGSC0003DMG400031232 Solanum tuberosum HOM05D004737 ORTHO05D005623 2.3e-61 239.2 162 72.2
Solyc10g074990.2 Solanum lycopersicum HOM05D004737 ORTHO05D005623 4.0e-61 238.4 165 70.9
COL.COLO4_34453 Corchorus olitorius HOM05D004737 ORTHO05D005623 1.2e-60 236.9 171 66.1
FvH4_5g02300 Fragaria vesca HOM05D004737 ORTHO05D005623 1.2e-60 236.9 165 69.1
Sopen10g027480 Solanum pennellii HOM05D004737 ORTHO05D005623 1.2e-60 236.9 165 70.3
Lj2g0011086 Lotus japonicus HOM05D004737 ORTHO05D005623 1.5e-60 236.5 165 69.1
ClCG01G002790 Citrullus lanatus HOM05D004737 ORTHO05D005623 2.0e-60 236.1 154 72.1
Phvul.002G157400 Phaseolus vulgaris HOM05D004737 ORTHO05D005623 3.4e-60 235.3 167 69.5
HanXRQChr06g0165541 Helianthus annuus HOM05D004737 ORTHO05D005623 7.5e-60 234.2 163 66.9
Aqoxy6G02772 Aquilegia oxysepala HOM05D004737 ORTHO05D005623 1.7e-59 233.0 170 66.5
Atru.chr2.2103 Acer truncatum HOM05D004737 ORTHO05D005623 2.2e-59 232.6 169 68.0
Ah.02g116610 Amaranthus hybridus HOM05D000756 ORTHO05D000604 4.9e-59 231.5 150 73.3
CiPaw.11G135900 Carya illinoinensis HOM05D004737 ORTHO05D005623 6.4e-59 231.1 171 65.5
Peaxi162Scf00198g00034 Petunia axillaris HOM05D004737 ORTHO05D005623 4.1e-58 228.4 180 62.8
Actinidia14554 Actinidia chinensis HOM05D004737 ORTHO05D005623 7.1e-58 227.6 129 82.2
Glyma.01G219700 Glycine max HOM05D004737 ORTHO05D005623 1.6e-57 226.5 169 65.7
CAN.G1149.8 Capsicum annuum HOM05D004737 ORTHO05D005623 2.7e-57 225.7 168 66.1
CANSAT21G0205 Cannabis sativa HOM05D004737 ORTHO05D005623 3.5e-57 225.3 163 66.9
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 3.9e-56 221.9 164 64.6
Ciclev10006013m.g Citrus clementina HOM05D004737 ORTHO05D005623 6.6e-56 221.1 154 68.8
TPR.G6698 Trifolium pratense HOM05D004737 ORTHO05D005623 8.6e-56 220.7 167 64.1
arahy.Tifrunner.gnm1.ann1.1HA888 Arachis hypogaea HOM05D004737 ORTHO05D005623 1.6e-54 216.5 164 68.3
SHI07123 Sapria himalayana HOM05D004737 ORTHO05D005623 3.6e-54 215.3 166 63.9
BcaC02g09203 Brassica carinata HOM05D004737 ORTHO05D005623 1.4e-53 213.4 162 64.8
C04p40020 Brassica napus HOM05D004737 ORTHO05D005623 1.4e-53 213.4 162 64.8
BolC4t25575H Brassica oleracea HOM05D004737 ORTHO05D005623 1.4e-53 213.4 162 64.8
Lalb_Chr09g0321031 Lupinus albus HOM05D004737 ORTHO05D005623 1.8e-53 213.0 163 67.5
ATR0782G239 Amborella trichopoda HOM05D004737 ORTHO05D005623 2.3e-53 212.6 165 63.0
A04p06580 Brassica napus HOM05D004737 ORTHO05D005623 2.3e-53 212.6 162 64.8
BraA04t16363Z Brassica rapa HOM05D004737 ORTHO05D005623 2.3e-53 212.6 162 64.8
AL5G33690 Arabidopsis lyrata HOM05D004737 ORTHO05D005623 3.1e-53 212.2 169 63.3
Thhalv10010768m.g Eutrema salsugineum HOM05D004737 ORTHO05D005623 6.8e-53 211.1 162 64.8
Sp5g09430 Schrenkiella parvula HOM05D004737 ORTHO05D005623 8.9e-53 210.7 162 64.8
BcaB02g08548 Brassica carinata HOM05D004737 ORTHO05D005623 2.0e-52 209.5 163 64.4
A07p21280 Brassica napus HOM05D004737 ORTHO05D005623 2.0e-52 209.5 163 65.6
BraA07t29816Z Brassica rapa HOM05D004737 ORTHO05D005623 2.0e-52 209.5 163 65.6
AT3G52905 Arabidopsis thaliana HOM05D004737 ORTHO05D005623 2.6e-52 209.1 162 64.2
HPP92_015901 Vanilla planifolia HOM05D004737 ORTHO05D005623 3.4e-52 208.8 165 62.4
Carub.0005s1938 Capsella rubella HOM05D004737 ORTHO05D005623 4.4e-52 208.4 162 65.4
CARHR162770 Cardamine hirsuta HOM05D004737 ORTHO05D005623 7.6e-52 207.6 162 64.8
BcaC08g44605 Brassica carinata HOM05D004737 ORTHO05D005623 1.1e-50 203.8 167 62.3
C06p20780 Brassica napus HOM05D004737 ORTHO05D005623 1.9e-50 203.0 165 63.0
BolC6t37261H Brassica oleracea HOM05D004737 ORTHO05D005623 1.9e-50 203.0 165 63.0
THA.LOC104805035 Tarenaya hassleriana HOM05D004737 ORTHO05D005623 3.2e-50 202.2 170 60.0
SGA_v2.0_scaffold96G28950 Striga asiatica HOM05D004737 ORTHO05D005623 5.4e-50 201.4 163 62.0
Sc07g0009740 Simmondsia chinensis HOM05D004737 ORTHO05D005623 4.6e-49 198.4 124 77.4
unitig_88.g27612 Utricularia gibba HOM05D004737 ORTHO05D005623 5.1e-48 194.9 163 57.7
Aa31LG10G7820 Aethionema arabicum HOM05D004737 ORTHO05D005623 6.6e-48 194.5 167 57.5
arahy.Tifrunner.gnm1.ann1.4Y2W44 Arachis hypogaea HOM05D004737 ORTHO05D005623 8.6e-48 194.1 152 67.1
Os01g0764700 Oryza sativa ssp. japonica HOM05D004737 ORTHO05D005623 8.6e-48 194.1 166 61.4
Migut.A00772 Erythranthe guttata HOM05D004737 ORTHO05D005623 4.9e-43 178.3 114 72.8
Psat0s3411g0080 Pisum sativum HOM05D004737 ORTHO05D005623 1.9e-42 176.4 163 58.3
PSO675G2933 Papaver somniferum HOM05D004737 ORTHO05D005623 4.0e-37 158.7 183 48.6
ECA246G4230 Erigeron canadensis HOM05D004737 ORTHO05D005623 6.9e-37 157.9 162 46.3
PSO541G1514 Papaver somniferum HOM05D004737 ORTHO05D005623 1.5e-36 156.8 183 49.2
Atru.chr11.10 Acer truncatum HOM05D004737 ORTHO05D005623 4.9e-35 151.8 165 47.3
Atru.chr2.774 Acer truncatum HOM05D004737 ORTHO05D005623 3.5e-33 145.6 179 41.3
Atru.chr6.144 Acer truncatum HOM05D004737 ORTHO05D005623 7.3e-31 137.9 177 45.2
Atru.chr6.77 Acer truncatum HOM05D004737 ORTHO05D005623 1.6e-30 136.7 177 45.2
BcaB02g07803 Brassica carinata HOM05D004737 ORTHO05D005623 1.5e-28 130.2 101 60.4
Atru.chr1.3075 Acer truncatum HOM05D004737 ORTHO05D005623 2.2e-27 126.3 184 40.2
Atru.chr1.3074 Acer truncatum HOM05D004737 ORTHO05D005623 6.4e-27 124.8 177 39.0
Atru.chr6.169 Acer truncatum HOM05D004737 ORTHO05D005623 8.4e-27 124.4 165 44.8
Atru.chr5.3476 Acer truncatum HOM05D004737 ORTHO05D005623 1.9e-26 123.2 175 44.0
Glyma.11G023800 Glycine max HOM05D004737 ORTHO05D005623 3.2e-26 122.5 112 58.0
Atru.chr13.1520 Acer truncatum HOM05D004737 ORTHO05D005623 1.6e-25 120.2 185 38.9
SEGI_05186 Sequoiadendron giganteum HOM05D004737 ORTHO05D005623 1.8e-24 116.7 115 52.2
Atru.chr1.4031 Acer truncatum HOM05D004737 ORTHO05D005623 3.9e-24 115.5 178 35.4
AagrBONN_evm.TU.Sc2ySwM_362.2040 Anthoceros agrestis HOM05D004737 ORTHO05D005623 1.1e-23 114.0 141 42.6
Atru.chr13.1180 Acer truncatum HOM05D004737 ORTHO05D005623 1.5e-23 113.6 177 39.0
Zm00001eb152210 Zea mays HOM05D004737 ORTHO05D005623 1.9e-23 113.2 109 59.6
Cpa.g.sc128.49 Carica papaya HOM05D004737 ORTHO05D005623 7.4e-23 111.3 70 74.3
Eucgr.E00580 Eucalyptus grandis HOM05D004737 ORTHO05D005623 1.3e-22 110.5 74 66.2
Atru.chr1.4028 Acer truncatum HOM05D004737 ORTHO05D005623 3.1e-21 105.9 165 34.5
Atru.chr2.781 Acer truncatum HOM05D004737 ORTHO05D005623 3.1e-21 105.9 164 34.1
CBR_g78868 Chara braunii HOM05D000019 ORTHO05D000048 4.0e-21 105.5 136 44.9
Pp3c24_17350 Physcomitrium patens HOM05D004737 ORTHO05D005623 4.0e-21 105.5 163 38.0
Atru.chr11.9 Acer truncatum HOM05D004737 ORTHO05D005623 6.9e-21 104.8 169 37.9
ECA240G3910 Erigeron canadensis HOM05D004737 ORTHO05D005623 4.5e-20 102.1 164 36.0
Psat2g182280 Pisum sativum HOM05D004737 ORTHO05D005623 7.6e-20 101.3 71 70.4
Atru.chr4.898 Acer truncatum HOM05D004737 ORTHO05D005623 2.2e-19 99.8 175 37.1
FAN04G3051 Fragaria x ananassa HOM05D004737 ORTHO05D005623 7.1e-18 94.7 71 67.6
Mapoly0022s0110 Marchantia polymorpha HOM05D004737 ORTHO05D005623 7.1e-18 94.7 138 39.1
Atru.chr1.3076 Acer truncatum HOM05D005378 ORTHO05D006986 2.1e-17 93.2 174 33.9
Atru.chr4.1971 Acer truncatum HOM05D004737 ORTHO05D005623 1.0e-16 90.9 166 32.5
ECA248G3864 Erigeron canadensis HOM05D004737 ORTHO05D005623 6.7e-16 88.2 153 30.7
Atru.chr4.1970 Acer truncatum HOM05D004737 ORTHO05D005623 1.1e-15 87.4 166 31.9
Atru.chr4.1967 Acer truncatum HOM05D004737 ORTHO05D005623 4.3e-15 85.5 111 42.3
Atru.chr12.1179 Acer truncatum HOM05D004737 ORTHO05D005623 5.7e-15 85.1 172 33.1
Atru.chr8.895 Acer truncatum HOM05D004737 ORTHO05D005623 7.4e-15 84.7 138 34.1
Atru.chr6.95 Acer truncatum HOM05D004737 ORTHO05D005623 2.1e-14 83.2 111 44.1
Atru.chr2.779 Acer truncatum HOM05D004737 ORTHO05D005623 2.8e-14 82.8 181 30.9
Atru.chr7.1970 Acer truncatum HOM05D004737 ORTHO05D005623 3.7e-14 82.4 146 34.2
ECA240G0629 Erigeron canadensis HOM05D004737 ORTHO05D005623 1.8e-13 80.1 107 40.2
Atru.chr5.3478 Acer truncatum HOM05D004737 ORTHO05D005623 2.4e-13 79.7 126 38.1
Atru.chr12.1697 Acer truncatum HOM05D004737 ORTHO05D005623 5.3e-13 78.6 158 30.4
Atru.chr12.1177 Acer truncatum HOM05D004737 ORTHO05D005623 4.5e-12 75.5 169 28.4
Atru.chr3.997 Acer truncatum HOM05D004737 ORTHO05D005623 4.5e-12 75.5 177 30.5
QL12p033469 Quercus lobata HOM05D004737 ORTHO05D005623 4.5e-12 75.5 45 77.8
Atru.chr1.4012 Acer truncatum HOM05D004737 ORTHO05D005623 1.1e-10 70.9 187 26.2
Atru.chr8.1290 Acer truncatum HOM05D004737 ORTHO05D005623 1.9e-10 70.1 141 31.9
Atru.chr12.1688 Acer truncatum HOM05D004737 ORTHO05D005623 2.5e-10 69.7 131 30.5
Atru.chr1.4019 Acer truncatum HOM05D002880 ORTHO05D005623 3.2e-10 69.3 103 39.8
Atru.chr7.1971 Acer truncatum HOM05D004737 ORTHO05D005623 3.5e-09 65.9 165 27.9
Atru.chr12.1394 Acer truncatum HOM05D004737 ORTHO05D005623 1.8e-08 63.5 176 27.8
Atru.chr5.2738 Acer truncatum HOM05D004737 ORTHO05D005623 3.0e-08 62.8 126 31.0
Atru.chr6.94 Acer truncatum HOM05D004737 ORTHO05D005623 9.7e-07 57.8 64 46.9
Medtr5g038850 Medicago truncatula HOM05D004737 ORTHO05D005623 2.2e-06 56.6 128 29.7
Atru.chr4.1966 Acer truncatum HOM05D004737 ORTHO05D052072 3.7e-06 55.8 75 42.7
Dinv01344 Davidia involucrata HOM05D065005 ORTHO05D005623 6.3e-06 55.1 31 77.4


User provided reference genes

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