Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11237 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 1.8e-209 732.6 367 100.0
vmacro11236 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 1.3e-55 221.5 140 80.7
vmacro21822 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 1.3e-47 194.9 353 39.1
Rhsim06G0007900 Rhododendron simsii HOM05D005066 ORTHO05D006138 9.1e-28 129.0 69 88.4
CSS0029951 Camellia sinensis var. sinensis HOM05D005066 ORTHO05D006138 4.5e-27 126.7 70 82.9
Dinv31933 Davidia involucrata HOM05D005066 ORTHO05D006138 8.5e-26 122.5 69 81.2
Manes.18G005800 Manihot esculenta HOM05D005066 ORTHO05D006138 2.5e-25 120.9 69 79.7
Potri.002G011200 Populus trichocarpa HOM05D005066 ORTHO05D006138 4.2e-25 120.2 73 71.2
GSVIVG01008680001 Vitis vinifera HOM05D005066 ORTHO05D006138 7.2e-25 119.4 69 79.7
Hma1.2p1_0507F.1_g168410 Hydrangea macrophylla HOM05D005066 ORTHO05D006138 9.4e-25 119.0 69 75.4
Prupe.1G355000 Prunus persica HOM05D005066 ORTHO05D006138 1.2e-24 118.6 69 75.4
Cpa.g.sc26.207 Carica papaya HOM05D005066 ORTHO05D006138 1.6e-24 118.2 69 75.4
Cc10_g00720 Coffea canephora HOM05D005066 ORTHO05D006138 2.7e-24 117.5 69 76.8
MD15G1002700 Malus domestica HOM05D005066 ORTHO05D006138 2.7e-24 117.5 69 75.4
Ciclev10001617m.g Citrus clementina HOM05D005066 ORTHO05D006138 3.6e-24 117.1 69 73.9
Potri.005G249800 Populus trichocarpa HOM05D005066 ORTHO05D006138 3.6e-24 117.1 69 75.4
TAR381G1664 Trochodendron aralioides HOM05D005066 ORTHO05D006138 4.7e-24 116.7 91 63.7
Lsat_1_v5_gn_2_6481 Lactuca sativa HOM05D005066 ORTHO05D006138 6.1e-24 116.3 69 75.4
Sabra05G0193300 Salix brachista HOM05D005066 ORTHO05D006138 6.1e-24 116.3 69 73.9
MD08G1003000 Malus domestica HOM05D005066 ORTHO05D006138 8.0e-24 115.9 69 73.9
Gohir.A05G254700 Gossypium hirsutum HOM05D005066 ORTHO05D006138 1.0e-23 115.5 69 72.5
Gohir.D05G256300 Gossypium hirsutum HOM05D005066 ORTHO05D006138 1.0e-23 115.5 69 72.5
Gorai.009G267800 Gossypium raimondii HOM05D005066 ORTHO05D006138 1.0e-23 115.5 69 72.5
Actinidia37971 Actinidia chinensis HOM05D005066 ORTHO05D006138 1.4e-23 115.2 69 76.8
COL.COLO4_03999 Corchorus olitorius HOM05D005066 ORTHO05D006138 1.8e-23 114.8 69 72.5
DCAR_013911 Daucus carota HOM05D005066 ORTHO05D006138 1.8e-23 114.8 69 75.4
PGR031G0259 Punica granatum HOM05D005066 ORTHO05D006138 1.8e-23 114.8 69 72.5
Duzib093G2109 Durio zibethinus HOM05D005066 ORTHO05D006138 2.3e-23 114.4 69 72.5
Lj4C805G13 Lonicera japonica HOM05D005066 ORTHO05D006138 3.0e-23 114.0 69 76.8
Oeu011330.2 Olea europaea HOM05D005066 ORTHO05D006138 3.9e-23 113.6 69 75.4
TWI36G1160 Tripterygium wilfordii HOM05D005066 ORTHO05D006138 1.1e-22 112.1 69 72.5
Haze_22764 Corylus avellana HOM05D005066 ORTHO05D006138 1.5e-22 111.7 63 79.4
THA.LOC104813757 Tarenaya hassleriana HOM05D005066 ORTHO05D006138 2.6e-22 110.9 69 71.0
Thecc.08G057800 Theobroma cacao HOM05D005066 ORTHO05D006138 2.6e-22 110.9 69 72.5
Cfa014063 Carpinus fangiana HOM05D005066 ORTHO05D006138 3.3e-22 110.5 69 72.5
CANSAT25G3513 Cannabis sativa HOM05D005066 ORTHO05D006138 4.4e-22 110.2 74 68.9
HanXRQChr14g0428271 Helianthus annuus HOM05D005066 ORTHO05D006138 4.4e-22 110.2 69 71.0
Eucgr.F03549 Eucalyptus grandis HOM05D005066 ORTHO05D006138 5.7e-22 109.8 69 71.0
Migut.C00955 Erythranthe guttata HOM05D005066 ORTHO05D006138 7.4e-22 109.4 69 71.0
ECA238G2025 Erigeron canadensis HOM05D005066 ORTHO05D006138 9.7e-22 109.0 69 71.0
Hund05118 Selenicereus undatus HOM05D005066 ORTHO05D006138 9.7e-22 109.0 69 73.9
Actinidia29788 Actinidia chinensis HOM05D005066 ORTHO05D006138 2.2e-21 107.8 69 72.5
CiPaw.07G139500 Carya illinoinensis HOM05D005066 ORTHO05D006138 2.2e-21 107.8 69 71.0
Sp5g31400 Schrenkiella parvula HOM05D005066 ORTHO05D006138 2.2e-21 107.8 69 69.6
Sc15g0004490 Simmondsia chinensis HOM05D005066 ORTHO05D006138 2.2e-21 107.8 69 71.0
SalBow7G4394 Salvia bowleyana HOM05D005066 ORTHO05D006138 2.8e-21 107.5 84 63.1
Aqoxy5G01046 Aquilegia oxysepala HOM05D005066 ORTHO05D006138 3.7e-21 107.1 69 69.6
EL10Ac1g01978 Beta vulgaris HOM05D005066 ORTHO05D006138 3.7e-21 107.1 69 72.5
Thhalv10018792m.g Eutrema salsugineum HOM05D005066 ORTHO05D006138 3.7e-21 107.1 69 69.6
Nn6g31745 Nelumbo nucifera HOM05D005066 ORTHO05D006138 3.7e-21 107.1 67 70.1
Peaxi162Scf00893g00433 Petunia axillaris HOM05D005066 ORTHO05D006138 3.7e-21 107.1 69 69.6
AUR62036885 Chenopodium quinoa HOM05D005066 ORTHO05D006138 4.8e-21 106.7 69 71.0
MSTRG.27774 Avicennia marina HOM05D005066 ORTHO05D006138 8.2e-21 105.9 69 68.1
AUR62043922 Chenopodium quinoa HOM05D005066 ORTHO05D006138 8.2e-21 105.9 69 69.6
RcHm_v2.0_Chr6g0304181 Rosa chinensis HOM05D005066 ORTHO05D006138 8.2e-21 105.9 69 73.9
SGA_v2.0_scaffold108G30855 Striga asiatica HOM05D005066 ORTHO05D006138 8.2e-21 105.9 69 71.0
QL02p013964 Quercus lobata HOM05D005066 ORTHO05D006138 1.4e-20 105.1 69 68.1
Ca_15439_v3 Cicer arietinum L. HOM05D005066 ORTHO05D006138 1.8e-20 104.8 65 72.3
Psat5g011560 Pisum sativum HOM05D005066 ORTHO05D006138 1.8e-20 104.8 69 66.7
A07p41830 Brassica napus HOM05D005066 ORTHO05D006138 2.4e-20 104.4 69 69.6
BraA07t31713Z Brassica rapa HOM05D005066 ORTHO05D006138 2.4e-20 104.4 69 69.6
FvH4_2g37550 Fragaria vesca HOM05D005066 ORTHO05D006138 2.4e-20 104.4 69 72.5
FAN20G0881 Fragaria x ananassa HOM05D005066 ORTHO05D006138 2.4e-20 104.4 69 72.5
Nitab4.5_0000588g0150 Nicotiana tabacum HOM05D005066 ORTHO05D006138 2.4e-20 104.4 69 68.1
Solyc04g082300.2 Solanum lycopersicum HOM05D005066 ORTHO05D006138 2.4e-20 104.4 69 68.1
Sopen04g035920 Solanum pennellii HOM05D005066 ORTHO05D006138 2.4e-20 104.4 69 68.1
PGSC0003DMG400009976 Solanum tuberosum HOM05D005066 ORTHO05D006138 2.4e-20 104.4 69 68.1
TPR.G38213 Trifolium pratense HOM05D005066 ORTHO05D006138 2.4e-20 104.4 69 66.7
FAN15G0307 Fragaria x ananassa HOM05D005066 ORTHO05D006138 3.1e-20 104.0 69 72.5
AT1G20540 Arabidopsis thaliana HOM05D005066 ORTHO05D006138 5.3e-20 103.2 69 68.1
BcaB07g32052 Brassica carinata HOM05D005066 ORTHO05D006138 5.3e-20 103.2 69 68.1
BcaC05g25960 Brassica carinata HOM05D005066 ORTHO05D006138 5.3e-20 103.2 69 68.1
BcaC08g47124 Brassica carinata HOM05D005066 ORTHO05D006138 5.3e-20 103.2 67 70.1
A06p16540 Brassica napus HOM05D005066 ORTHO05D006138 5.3e-20 103.2 69 68.1
BNapus_Darmor_BZH_scaffold_170p00070 Brassica napus HOM05D005066 ORTHO05D006138 5.3e-20 103.2 69 68.1
C05p19110 Brassica napus HOM05D005066 ORTHO05D006138 5.3e-20 103.2 69 68.1
C06p50230 Brassica napus HOM05D005066 ORTHO05D006138 5.3e-20 103.2 69 68.1
BolC5t30611H Brassica oleracea HOM05D005066 ORTHO05D006138 5.3e-20 103.2 69 68.1
BraA06t24760Z Brassica rapa HOM05D005066 ORTHO05D006138 5.3e-20 103.2 69 68.1
AT1G76260 Arabidopsis thaliana HOM05D005066 ORTHO05D006138 7.0e-20 102.8 67 70.1
FAN27G0843 Fragaria x ananassa HOM05D005066 ORTHO05D006138 7.0e-20 102.8 69 71.0
PSO170G0128 Papaver somniferum HOM05D005066 ORTHO05D006138 7.0e-20 102.8 67 68.7
PSO210G7270 Papaver somniferum HOM05D005066 ORTHO05D006138 7.0e-20 102.8 67 68.7
AL2G36340 Arabidopsis lyrata HOM05D005066 ORTHO05D006138 9.1e-20 102.4 67 68.7
vmacro21824 Vaccinium macrocarpon HOM05D004614 ORTHO05D005339 9.1e-20 102.4 257 37.0
BcaC08g47273 Brassica carinata HOM05D005066 ORTHO05D006138 1.2e-19 102.1 69 66.7
BolC6t40062H Brassica oleracea HOM05D005066 ORTHO05D006138 1.2e-19 102.1 69 66.7
Aa31LG4G6350 Aethionema arabicum HOM05D005066 ORTHO05D006138 1.6e-19 101.7 67 67.2
CANSAT54G1628 Cannabis sativa HOM05D005066 ORTHO05D006138 1.6e-19 101.7 74 63.5
Lj1g0027661 Lotus japonicus HOM05D005066 ORTHO05D006138 1.6e-19 101.7 69 66.7
Medtr3g115200 Medicago truncatula HOM05D005066 ORTHO05D006138 1.6e-19 101.7 69 65.2
Thhalv10008062m.g Eutrema salsugineum HOM05D005066 ORTHO05D006138 2.0e-19 101.3 69 66.7
AL1G33470 Arabidopsis lyrata HOM05D005066 ORTHO05D006138 2.6e-19 100.9 69 66.7
Carub.0002s2315 Capsella rubella HOM05D005066 ORTHO05D006138 4.5e-19 100.1 67 67.2
MBI05_g05143_MAGBIO Magnolia biondii HOM05D005066 ORTHO05D006138 4.5e-19 100.1 69 66.7
unitig_26.g9893 Utricularia gibba HOM05D005066 ORTHO05D006138 4.5e-19 100.1 69 66.7
Sp1g18250 Schrenkiella parvula HOM05D005066 ORTHO05D006138 5.9e-19 99.8 69 65.2
Lalb_Chr23g0265821 Lupinus albus HOM05D005066 ORTHO05D006138 7.7e-19 99.4 69 60.9
CARHR021010 Cardamine hirsuta HOM05D005066 ORTHO05D006138 1.0e-18 99.0 69 65.2
MELO3C026544.2 Cucumis melo HOM05D005066 ORTHO05D006138 1.0e-18 99.0 70 65.7
CsaV3_6G031630 Cucumis sativus L. HOM05D005066 ORTHO05D006138 1.3e-18 98.6 70 64.3
Carub.0001s2001 Capsella rubella HOM05D005066 ORTHO05D006138 1.7e-18 98.2 69 63.8
CARHR069820 Cardamine hirsuta HOM05D005066 ORTHO05D006138 1.7e-18 98.2 67 67.2
Sed0022458 Sechium edule HOM05D005066 ORTHO05D006138 1.7e-18 98.2 70 64.3
Glyma.04G018500 Glycine max HOM05D005066 ORTHO05D006138 2.2e-18 97.8 69 63.8
VMungo1309G2329 Vigna mungo HOM05D005066 ORTHO05D006138 3.8e-18 97.1 69 62.3
Glyma.06G018800 Glycine max HOM05D005066 ORTHO05D006138 3.2e-17 94.0 68 61.8
Phvul.009G010100 Phaseolus vulgaris HOM05D005066 ORTHO05D006138 3.2e-17 94.0 69 59.4
vmacro21823 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 3.2e-17 94.0 52 94.2
Aa31LG7G4800 Aethionema arabicum HOM05D005066 ORTHO05D006138 4.2e-17 93.6 69 63.8
arahy.Tifrunner.gnm1.ann1.76XKSK Arachis hypogaea HOM05D005066 ORTHO05D006138 7.2e-17 92.8 69 60.9
arahy.Tifrunner.gnm1.ann1.B8YF15 Arachis hypogaea HOM05D005066 ORTHO05D006138 7.2e-17 92.8 69 60.9
ATR0661G259 Amborella trichopoda HOM05D005066 ORTHO05D006138 8.0e-16 89.4 73 54.8
HPP92_008373 Vanilla planifolia HOM05D005066 ORTHO05D006138 2.3e-15 87.8 69 55.1
ClCG00G005440 Citrullus lanatus HOM05D005066 ORTHO05D006138 5.2e-15 86.7 57 68.4
Mapoly0054s0060 Marchantia polymorpha HOM05D005066 ORTHO05D006138 3.7e-13 80.5 72 48.6
AagrBONN_evm.TU.Sc2ySwM_362.948 Anthoceros agrestis HOM05D005066 ORTHO05D006138 6.3e-13 79.7 72 45.8
Ah.13g072510 Amaranthus hybridus HOM05D005066 ORTHO05D006138 1.4e-12 78.6 71 56.3
Zm00001eb039840 Zea mays HOM05D005066 ORTHO05D006138 1.8e-12 78.2 69 52.2
AUR62043921 Chenopodium quinoa HOM05D005066 ORTHO05D006138 2.4e-12 77.8 44 77.3
Os08g0554000 Oryza sativa ssp. japonica HOM05D005066 ORTHO05D006138 2.4e-12 77.8 69 49.3
ClCG08G009490 Citrullus lanatus HOM05D005066 ORTHO05D006138 4.1e-12 77.0 44 72.7
AUR62043554 Chenopodium quinoa HOM05D005066 ORTHO05D006138 7.0e-12 76.3 44 75.0
arahy.Tifrunner.gnm1.ann1.7RQ6TB Arachis hypogaea HOM05D005066 ORTHO05D006138 3.8e-10 70.5 61 49.2
SMO118G0316 Selaginella moellendorffii HOM05D005066 ORTHO05D006138 1.1e-09 68.9 77 37.7
AUR62038170 Chenopodium quinoa HOM05D000030 ORTHO05D000031 1.5e-09 68.6 42 69.0
CBR_g17938 Chara braunii HOM05D005066 ORTHO05D006138 1.9e-09 68.2 69 40.6
arahy.Tifrunner.gnm1.ann1.FBZU85 Arachis hypogaea HOM05D005066 ORTHO05D006138 3.2e-09 67.4 56 50.0
AUR62018933 Chenopodium quinoa HOM05D000030 ORTHO05D000031 1.2e-08 65.5 40 70.0
Nn4g22810 Nelumbo nucifera HOM05D005066 ORTHO05D006138 2.1e-08 64.7 41 65.9
SHI08001 Sapria himalayana HOM05D005066 ORTHO05D006138 4.7e-08 63.5 33 78.8


User provided reference genes

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