Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 0.0e+00 1188.7 613 100.0
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 9.7e-243 843.6 624 72.8
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 2.2e-234 815.8 631 68.1
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 1.1e-225 786.9 619 68.5
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 5.2e-196 688.3 604 60.1
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 7.6e-187 657.9 617 57.1
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 2.9e-186 656.0 656 55.6
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 1.3e-183 647.1 607 58.0
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 1.9e-182 643.3 615 58.5
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 2.0e-179 633.3 609 56.2
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 7.6e-179 631.3 605 56.4
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 3.8e-178 629.0 665 54.7
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 4.9e-178 628.6 601 57.1
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 1.1e-177 627.5 583 56.6
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 1.4e-177 627.1 608 54.9
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 7.1e-177 624.8 609 54.5
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 7.1e-177 624.8 608 54.6
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 1.1e-174 617.5 611 53.8
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 1.1e-174 617.5 607 54.0
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 3.3e-174 615.9 615 56.7
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 9.6e-174 614.4 598 55.2
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 3.6e-173 612.5 607 54.7
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 8.1e-173 611.3 600 55.7
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 2.4e-172 609.8 608 53.3
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 3.1e-172 609.4 607 54.2
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 6.9e-172 608.2 624 52.9
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 1.5e-171 607.1 600 55.2
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 2.6e-171 606.3 615 53.8
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 3.4e-171 605.9 599 53.9
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 4.5e-171 605.5 598 53.8
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 7.6e-171 604.7 624 52.6
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 9.9e-171 604.4 611 53.8
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 1.1e-169 600.9 602 52.2
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.4e-169 600.5 624 52.2
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 1.9e-169 600.1 611 52.5
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 1.6e-168 597.0 600 52.5
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 3.5e-168 595.9 607 54.0
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 2.3e-167 593.2 602 52.7
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 1.1e-166 590.9 608 53.6
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 9.6e-166 587.8 598 54.3
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 2.1e-165 586.6 600 52.3
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 2.4e-164 583.2 598 52.5
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 1.2e-163 580.9 598 53.7
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 5.8e-163 578.6 598 53.7
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 2.1e-160 570.1 603 50.1
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 2.1e-160 570.1 594 53.4
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 1.0e-159 567.8 608 51.5
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 2.3e-159 566.6 599 52.8
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 7.4e-158 561.6 624 50.2
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 8.2e-157 558.1 651 48.2
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 1.7e-154 550.4 601 51.7
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 2.2e-154 550.1 608 51.5
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 3.8e-154 549.3 600 53.5
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 5.5e-153 545.4 561 54.0
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 1.2e-152 544.3 609 50.6
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 1.0e-151 541.2 614 50.8
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 3.9e-151 539.3 584 51.5
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 6.7e-151 538.5 613 49.9
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 8.7e-151 538.1 607 51.4
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 1.5e-150 537.3 602 49.7
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 5.7e-150 535.4 574 51.2
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 5.7e-150 535.4 646 48.6
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 2.4e-148 530.0 671 44.6
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 5.1e-135 485.7 650 45.1
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 8.8e-135 485.0 605 45.3
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 4.4e-134 482.6 436 59.6
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 3.7e-133 479.6 529 51.0
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 3.5e-131 473.0 615 44.1
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 1.7e-130 470.7 602 45.5
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 1.8e-127 460.7 405 60.7
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 5.2e-127 459.1 634 42.9
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 6.7e-127 458.8 606 42.9
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 2.0e-126 457.2 605 44.6
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 4.4e-126 456.1 604 43.5
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 2.8e-125 453.4 650 41.7
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.1e-121 441.4 543 47.9
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 5.5e-121 439.1 483 50.3
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 3.0e-119 433.3 585 42.4
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 2.6e-118 430.3 616 41.9
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 7.5e-118 428.7 612 41.8
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 3.1e-116 423.3 624 41.3
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 5.4e-116 422.5 627 40.5
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 5.9e-115 419.1 631 40.7
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 2.2e-114 417.2 623 40.1
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 7.5e-110 402.1 532 44.0
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 5.4e-108 396.0 627 38.8
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 4.5e-107 392.9 631 38.5
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 6.6e-106 389.0 500 44.4
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 8.6e-106 388.7 611 39.0
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.1e-104 384.0 388 55.2
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.8e-103 380.9 388 54.9
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 2.3e-103 380.6 510 45.7
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.5e-99 366.7 388 53.4
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 7.3e-97 359.0 426 47.2
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 1.4e-95 354.8 593 39.1
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.7e-90 337.8 388 50.8
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 6.6e-90 335.9 565 37.7
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 1.2e-83 315.1 347 51.3
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 1.3e-74 285.0 277 54.9
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 1.6e-72 278.1 451 38.4
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.6e-59 235.0 463 35.9
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 6.2e-56 223.0 294 45.6
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 1.7e-45 188.3 160 57.5
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 3.8e-45 187.2 515 28.9
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 6.5e-45 186.4 224 43.8
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 3.3e-41 174.1 534 28.8
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 6.9e-39 166.4 180 49.4
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 6.5e-37 159.8 141 54.6
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 3.0e-34 151.0 623 25.2
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.1e-33 149.1 588 26.0
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.5e-33 147.9 91 79.1
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 4.8e-32 143.7 655 24.3
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 1.1e-25 122.5 271 30.6
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 3.8e-21 107.5 96 55.2
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 1.7e-16 92.0 132 43.2
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 1.8e-15 88.6 87 54.0
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 1.9e-12 78.6 246 27.6
Gohir.A11G232166 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.0e-10 72.8 63 54.0
Gohir.A04G102300 Gossypium hirsutum HOM05D001271 ORTHO05D007796 3.0e-10 71.2 62 54.8
Gohir.A01G131311 Gossypium hirsutum HOM05D006351 ORTHO05D007796 8.8e-10 69.7 51 62.7
Gohir.A13G118000 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.6e-09 68.2 63 52.4
Gohir.A03G098900 Gossypium hirsutum HOM05D001271 ORTHO05D007796 3.1e-07 61.2 51 56.9


User provided reference genes

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