Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro11153 Vaccinium macrocarpon HOM05D006924 ORTHO05D008218 6.5e-167 590.9 353 100.0
Rhsim02G0195700 Rhododendron simsii HOM05D006924 ORTHO05D008218 5.8e-115 418.3 353 73.7
CSS0024674 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 2.0e-107 393.3 348 63.5
Rhsim02G0198800 Rhododendron simsii HOM05D006924 ORTHO05D008218 4.5e-107 392.1 412 61.4
Dinv15967 Davidia involucrata HOM05D006924 ORTHO05D008218 2.8e-85 319.7 350 64.3
Dinv18229 Davidia involucrata HOM05D006924 ORTHO05D008218 2.8e-85 319.7 350 64.3
Actinidia13248 Actinidia chinensis HOM05D006924 ORTHO05D008218 3.7e-85 319.3 281 69.4
GSVIVG01035827001 Vitis vinifera HOM05D006924 ORTHO05D008218 6.7e-79 298.5 358 52.2
Cfa013171 Carpinus fangiana HOM05D006924 ORTHO05D008218 3.7e-77 292.7 352 58.2
QL02p022351 Quercus lobata HOM05D006924 ORTHO05D008218 1.9e-73 280.4 351 56.1
Migut.E01789 Erythranthe guttata HOM05D006924 ORTHO05D008218 2.0e-70 270.4 351 57.5
Cc08_g00950 Coffea canephora HOM05D006924 ORTHO05D008218 2.6e-70 270.0 266 60.2
Hund25749 Selenicereus undatus HOM05D006924 ORTHO05D008218 2.6e-70 270.0 363 55.1
Lsat_1_v5_gn_5_30481 Lactuca sativa HOM05D006924 ORTHO05D008218 3.3e-70 269.6 332 58.7
MSTRG.1715 Avicennia marina HOM05D006924 ORTHO05D008218 5.7e-70 268.9 336 56.0
DCAR_001517 Daucus carota HOM05D006924 ORTHO05D008218 7.4e-70 268.5 349 52.1
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 9.7e-70 268.1 375 53.1
TWI34G0486 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 3.7e-69 266.2 354 53.1
COL.COLO4_00196 Corchorus olitorius HOM05D006924 ORTHO05D008218 1.4e-68 264.2 355 57.7
Ciclev10010768m.g Citrus clementina HOM05D006924 ORTHO05D008218 1.2e-67 261.2 351 52.1
Nitab4.5_0002007g0080 Nicotiana tabacum HOM05D006924 ORTHO05D008218 3.5e-67 259.6 275 56.4
HanXRQChr08g0234821 Helianthus annuus HOM05D006924 ORTHO05D008218 4.5e-67 259.2 312 49.7
CAN.G6.23 Capsicum annuum HOM05D006924 ORTHO05D008218 1.7e-66 257.3 275 52.7
Nn8g39393 Nelumbo nucifera HOM05D006924 ORTHO05D008218 1.7e-66 257.3 273 62.3
Thecc.09G150000 Theobroma cacao HOM05D006924 ORTHO05D008218 2.9e-66 256.5 335 51.3
Sabra06G0196700 Salix brachista HOM05D006924 ORTHO05D008218 8.5e-66 255.0 352 51.4
unitig_26.g9317 Utricularia gibba HOM05D006924 ORTHO05D008218 1.1e-65 254.6 269 55.8
Potri.006G251700 Populus trichocarpa HOM05D006924 ORTHO05D008218 2.5e-65 253.4 356 52.0
Ah.12g064050 Amaranthus hybridus HOM05D006924 ORTHO05D008218 5.5e-65 252.3 373 50.1
Duzib187G1593 Durio zibethinus HOM05D006924 ORTHO05D008218 9.4e-65 251.5 354 48.9
PSO455G0271 Papaver somniferum HOM05D006924 ORTHO05D008218 9.4e-65 251.5 376 51.9
TWI63G1089 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 1.2e-64 251.1 352 50.6
Aqoxy7G02106 Aquilegia oxysepala HOM05D006924 ORTHO05D008218 6.1e-64 248.8 364 53.8
Nitab4.5_0009676g0020 Nicotiana tabacum HOM05D006924 ORTHO05D008218 6.1e-64 248.8 346 49.1
Gorai.004G274200 Gossypium raimondii HOM05D006924 ORTHO05D008218 1.0e-63 248.1 294 54.4
THA.LOC104815037 Tarenaya hassleriana HOM05D006924 ORTHO05D008218 1.4e-63 247.7 352 50.6
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 1.2e-62 244.6 275 60.4
Gohir.D08G257200 Gossypium hirsutum HOM05D006924 ORTHO05D008218 2.0e-62 243.8 364 51.4
Glyma.04G068000 Glycine max HOM05D006924 ORTHO05D008218 3.3e-62 243.0 348 44.8
Glyma.06G069700 Glycine max HOM05D006924 ORTHO05D008218 4.4e-62 242.7 273 56.0
ClCG05G017060 Citrullus lanatus HOM05D006924 ORTHO05D008218 3.7e-61 239.6 340 55.9
MELO3C003685.2 Cucumis melo HOM05D006924 ORTHO05D008218 3.7e-61 239.6 310 55.8
VMungo1309G0550 Vigna mungo HOM05D006924 ORTHO05D008218 6.3e-61 238.8 280 52.5
CsaV3_3G046540 Cucumis sativus L. HOM05D006924 ORTHO05D008218 1.1e-60 238.0 331 53.8
Lalb_Chr23g0268731 Lupinus albus HOM05D006924 ORTHO05D008218 1.4e-60 237.7 285 49.8
Sc09g0008380 Simmondsia chinensis HOM05D006924 ORTHO05D008218 3.1e-60 236.5 268 57.5
Cpa.g.sc115.10 Carica papaya HOM05D006924 ORTHO05D008218 4.1e-60 236.1 339 47.5
Manes.03G016800 Manihot esculenta HOM05D006924 ORTHO05D008218 7.0e-60 235.3 354 52.5
PSO455G0276 Papaver somniferum HOM05D006924 ORTHO05D008218 7.0e-60 235.3 290 59.0
Gohir.A08G236600 Gossypium hirsutum HOM05D006924 ORTHO05D008218 9.1e-60 235.0 283 57.2
FAN27G0236 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.6e-59 234.2 326 52.5
Phvul.009G094300 Phaseolus vulgaris HOM05D006924 ORTHO05D008218 2.7e-59 233.4 275 54.9
PSO170G6279 Papaver somniferum HOM05D006924 ORTHO05D008218 1.3e-58 231.1 375 50.9
FAN20G0173 Fragaria x ananassa HOM05D006924 ORTHO05D008218 2.9e-58 229.9 360 52.8
FAN24G1985 Fragaria x ananassa HOM05D006924 ORTHO05D008218 5.0e-58 229.2 362 51.1
CDE04G2397 Ceratophyllum demersum HOM05D006924 ORTHO05D008218 8.5e-58 228.4 309 46.9
PGSC0003DMG400020785 Solanum tuberosum HOM05D006924 ORTHO05D008218 1.1e-57 228.0 327 46.8
AL6G21900 Arabidopsis lyrata HOM05D006924 ORTHO05D008218 1.5e-57 227.6 264 63.3
CANSAT21G2575 Cannabis sativa HOM05D006924 ORTHO05D008218 1.5e-57 227.6 314 54.1
MD08G1147000 Malus domestica HOM05D006924 ORTHO05D008218 2.5e-57 226.9 361 51.8
Eucgr.C02804 Eucalyptus grandis HOM05D006924 ORTHO05D008218 4.2e-57 226.1 367 43.3
FvH4_2g29450 Fragaria vesca HOM05D006924 ORTHO05D008218 9.4e-57 224.9 361 52.1
Carub.0006s0974 Capsella rubella HOM05D006924 ORTHO05D008218 1.2e-56 224.6 262 62.2
Solyc08g061140.3 Solanum lycopersicum HOM05D006924 ORTHO05D008218 2.1e-56 223.8 293 46.8
BcaB08g37076 Brassica carinata HOM05D006924 ORTHO05D008218 2.7e-56 223.4 264 61.4
Lj1g0004722 Lotus japonicus HOM05D006924 ORTHO05D008218 4.7e-56 222.6 315 48.6
Peaxi162Scf00073g01120 Petunia axillaris HOM05D006924 ORTHO05D008218 4.7e-56 222.6 275 52.7
CARHR201990 Cardamine hirsuta HOM05D006924 ORTHO05D008218 8.0e-56 221.9 266 59.0
Ca_15720_v3 Cicer arietinum L. HOM05D006924 ORTHO05D008218 1.0e-55 221.5 270 48.1
Aa31LG3G15920 Aethionema arabicum HOM05D006924 ORTHO05D008218 1.4e-55 221.1 350 50.6
Sp6g32290 Schrenkiella parvula HOM05D006924 ORTHO05D008218 1.8e-55 220.7 263 57.4
Psat5g028520 Pisum sativum HOM05D006924 ORTHO05D008218 4.0e-55 219.5 343 42.9
AT5G11270 Arabidopsis thaliana HOM05D006924 ORTHO05D008218 5.2e-55 219.2 267 60.7
EL10Ac2g02609 Beta vulgaris HOM05D006924 ORTHO05D008218 6.8e-55 218.8 281 49.5
Sopen08g016210 Solanum pennellii HOM05D006924 ORTHO05D008218 8.8e-55 218.4 362 43.4
BcaC04g19245 Brassica carinata HOM05D006924 ORTHO05D008218 1.2e-54 218.0 345 52.5
MBI04_g07630_MAGBIO Magnolia biondii HOM05D006924 ORTHO05D008218 1.2e-54 218.0 358 48.3
arahy.Tifrunner.gnm1.ann1.SMV5T8 Arachis hypogaea HOM05D006924 ORTHO05D008218 9.8e-54 214.9 273 52.0
Thhalv10013990m.g Eutrema salsugineum HOM05D006924 ORTHO05D008218 9.8e-54 214.9 263 54.4
RcHm_v2.0_Chr6g0298241 Rosa chinensis HOM05D006924 ORTHO05D008218 1.3e-53 214.5 286 57.3
Sed0001141 Sechium edule HOM05D006924 ORTHO05D008218 1.3e-53 214.5 276 47.8
CiPaw.08G012700 Carya illinoinensis HOM05D006924 ORTHO05D008218 2.8e-53 213.4 309 51.1
BraA10t44702Z Brassica rapa HOM05D006924 ORTHO05D008218 8.3e-53 211.8 350 50.9
A10p26450 Brassica napus HOM05D006924 ORTHO05D008218 1.4e-52 211.1 263 56.3
arahy.Tifrunner.gnm1.ann1.748QI4 Arachis hypogaea HOM05D006924 ORTHO05D008218 9.1e-52 208.4 275 49.8
Zm00001eb385620 Zea mays HOM05D006924 ORTHO05D008218 2.0e-51 207.2 348 42.8
SalBow1G5089 Salvia bowleyana HOM05D006924 ORTHO05D008218 7.7e-51 205.3 151 68.2
Haze_21546 Corylus avellana HOM05D006924 ORTHO05D008218 5.0e-50 202.6 339 49.9
ATR0564G047 Amborella trichopoda HOM05D006924 ORTHO05D008218 8.6e-50 201.8 285 49.1
TPR.G31774 Trifolium pratense HOM05D006924 ORTHO05D008218 8.6e-50 201.8 172 59.3
BolC9t59383H Brassica oleracea HOM05D006924 ORTHO05D008218 1.9e-49 200.7 348 49.4
Medtr3g107530 Medicago truncatula HOM05D006924 ORTHO05D008218 1.9e-49 200.7 277 45.1
Os06g0601000 Oryza sativa ssp. japonica HOM05D006924 ORTHO05D008218 1.9e-49 200.7 264 48.1
FAN15G1620 Fragaria x ananassa HOM05D006924 ORTHO05D008218 2.8e-48 196.8 262 58.0
AUR62024897 Chenopodium quinoa HOM05D006924 ORTHO05D008218 4.4e-46 189.5 285 43.2
CSS0004992 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 5.9e-43 179.1 122 74.6
HPP92_003651 Vanilla planifolia HOM05D000347 ORTHO05D001997 7.8e-43 178.7 165 61.2
Lj7C719T2 Lonicera japonica HOM05D006924 ORTHO05D008218 3.8e-42 176.4 238 55.5
Prupe.1G478200 Prunus persica HOM05D006924 ORTHO05D008218 1.1e-41 174.9 367 45.8
Atru.chr7.2389 Acer truncatum HOM05D006924 ORTHO05D008218 1.9e-41 174.1 345 39.4
PGR044G1352 Punica granatum HOM05D006924 ORTHO05D008218 7.3e-41 172.2 317 47.9
TAR626G1567 Trochodendron aralioides HOM05D006924 ORTHO05D008218 1.2e-40 171.4 151 62.3
Pp3c19_15790 Physcomitrium patens HOM05D006924 ORTHO05D008218 9.5e-25 118.6 286 41.6
AUR62030642 Chenopodium quinoa HOM05D006924 ORTHO05D008218 5.2e-23 112.8 285 33.3
Mapoly0029s0145 Marchantia polymorpha HOM05D006924 ORTHO05D008218 6.8e-23 112.5 258 38.8
Atru.chr7.2280 Acer truncatum HOM05D006924 ORTHO05D008218 1.7e-21 107.8 113 51.3
Atru.chr10.503 Acer truncatum HOM05D006924 ORTHO05D008218 1.8e-15 87.8 323 30.0
Hma1.2p1_0000F.1_g000370 Hydrangea macrophylla HOM05D006924 ORTHO05D008218 6.8e-15 85.9 133 55.6
Haze_21544 Corylus avellana HOM05D006924 ORTHO05D008218 3.8e-13 80.1 46 78.3
SEGI_32810 Sequoiadendron giganteum HOM05D006924 ORTHO05D008218 7.1e-12 75.9 245 31.8
Nn2g11969 Nelumbo nucifera HOM05D006924 ORTHO05D008218 1.6e-11 74.7 185 34.6
AagrBONN_evm.TU.Sc2ySwM_368.1808 Anthoceros agrestis HOM05D006924 ORTHO05D008218 2.1e-11 74.3 141 37.6
TPR.G28713 Trifolium pratense HOM05D006924 ORTHO05D008218 1.0e-10 72.0 45 66.7
Atru.chr1.1063 Acer truncatum HOM05D006924 ORTHO05D008218 1.9e-09 67.8 84 47.6
C09p65600 Brassica napus HOM05D000552 ORTHO05D003270 7.3e-09 65.9 117 64.1
SMO367G1066 Selaginella moellendorffii HOM05D024584 ORTHO05D008218 6.2e-08 62.8 54 46.3
Cre03.g200431 Chlamydomonas reinhardtii HOM05D006924 ORTHO05D008218 5.8e-06 56.2 170 28.8


User provided reference genes

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