Gene: HPP92_003651
General Information
Structural Information
- Species Vanilla planifolia
- Gene Identifier HPP92_003651
- Transcript Identifier Vpl01Ag03651.1
- Gene Type Coding gene
- Location CM028150.1 : 65788073-65811219 : positive
Gene Family Information
- ID HOM05D000347
- #Genes/#Species 1366/100
- Phylogenetic origin
- ID ORTHO05D001997
- #Genes/#Species 328/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Vpl01Ag03651.1
- pid KAG0498960.1
Descriptions
- Description Histone-binding protein MSI1 ***
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010026 | ISO | PLAZA Integrative Orthology | trichome differentiation | AT5G58230 |
| GO:0010214 | ISO | PLAZA Integrative Orthology | seed coat development | AT5G58230 |
| GO:2000653 | ISO | PLAZA Integrative Orthology | regulation of genetic imprinting | AT5G58230 |
| GO:0048366 | ISO | PLAZA Integrative Orthology | leaf development | AT5G58230 |
| GO:0031507 | ISO | PLAZA Integrative Orthology | heterochromatin assembly | AT5G58230 |
| GO:0009909 | ISO | PLAZA Integrative Orthology | regulation of flower development | AT5G58230 |
| GO:0006349 | ISO | PLAZA Integrative Orthology | regulation of gene expression by genetic imprinting | AT5G58230 |
| GO:0045787 | ISO | PLAZA Integrative Orthology | positive regulation of cell cycle | AT5G58230 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT5G58230 |
| GO:0048316 | ISO | PLAZA Integrative Orthology | seed development | AT5G58230 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT5G58230 |
| GO:0007275 | ISO | PLAZA Integrative Orthology | multicellular organism development | AT5G58230 |
| GO:0070828 | ISO | PLAZA Integrative Orthology | heterochromatin organization | AT5G58230 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G58230 |
| GO:0032991 | ISO | PLAZA Integrative Orthology | protein-containing complex | AT5G58230 |
| GO:0005677 | ISO | PLAZA Integrative Orthology | chromatin silencing complex | AT5G58230 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001356 | Homeobox domain |
| IPR020472 | G-protein beta WD-40 repeat |
| IPR001680 | WD40 repeat |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR009057 | Homeobox-like domain superfamily |
| IPR022052 | Histone-binding protein RBBP4, N-terminal |
| IPR036322 | WD40-repeat-containing domain superfamily |