Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro10769 Vaccinium macrocarpon HOM05D004594 ORTHO05D005225 0.0e+00 1169.8 777 100.0
Rhsim09G0077000 Rhododendron simsii HOM05D004594 ORTHO05D005225 7.3e-219 764.6 864 67.2
Actinidia11790 Actinidia chinensis HOM05D004594 ORTHO05D005225 1.7e-159 567.4 844 51.8
Dinv02961 Davidia involucrata HOM05D004594 ORTHO05D005225 9.4e-150 535.0 808 54.2
Manes.01G034200 Manihot esculenta HOM05D004594 ORTHO05D005225 6.2e-101 372.9 808 42.9
QL03p068116 Quercus lobata HOM05D004594 ORTHO05D005225 1.3e-98 365.2 809 43.1
CiPaw.06G087400 Carya illinoinensis HOM05D004594 ORTHO05D005225 1.6e-96 358.2 797 43.5
Haze_11988 Corylus avellana HOM05D004594 ORTHO05D005225 3.9e-95 353.6 800 43.8
TAR371G0293 Trochodendron aralioides HOM05D004594 ORTHO05D005225 9.5e-94 349.0 826 44.3
Duzib248G1210 Durio zibethinus HOM05D004594 ORTHO05D005225 1.2e-91 342.0 811 44.1
DCAR_013185 Daucus carota HOM05D004594 ORTHO05D005225 9.9e-91 339.0 823 40.9
Eucgr.G02485 Eucalyptus grandis HOM05D004594 ORTHO05D005225 1.2e-88 332.0 793 38.5
MD16G1069300 Malus domestica HOM05D004594 ORTHO05D005225 4.6e-88 330.1 819 41.9
CANSAT64G0453 Cannabis sativa HOM05D004594 ORTHO05D005225 5.1e-87 326.6 802 42.9
TAR629G1990 Trochodendron aralioides HOM05D004594 ORTHO05D005225 1.9e-86 324.7 837 40.7
TWI75G1472 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 1.6e-85 321.6 829 38.5
Manes.05G104800 Manihot esculenta HOM05D004594 ORTHO05D005225 2.1e-85 321.2 806 40.7
Cfa008959 Carpinus fangiana HOM05D004594 ORTHO05D005225 2.8e-85 320.9 795 44.4
FvH4_4g31060 Fragaria vesca HOM05D004594 ORTHO05D005225 2.4e-84 317.8 815 40.1
Potri.010G166100 Populus trichocarpa HOM05D004594 ORTHO05D005225 2.4e-84 317.8 831 40.2
CAN.G194.5 Capsicum annuum HOM05D004594 ORTHO05D005225 2.0e-83 314.7 807 37.2
Sopen04g003850 Solanum pennellii HOM05D004594 ORTHO05D005225 2.6e-83 314.3 805 38.0
Prupe.1G277900 Prunus persica HOM05D004594 ORTHO05D005225 2.9e-82 310.8 804 40.7
FAN17G1193 Fragaria x ananassa HOM05D004594 ORTHO05D005225 6.4e-82 309.7 818 39.5
Thecc.02G342500 Theobroma cacao HOM05D004594 ORTHO05D005225 8.4e-82 309.3 800 41.4
CsaV3_5G025180 Cucumis sativus L. HOM05D004594 ORTHO05D005225 1.1e-81 308.9 830 37.6
FAN07G2218 Fragaria x ananassa HOM05D004594 ORTHO05D005225 2.4e-81 307.8 814 39.6
RcHm_v2.0_Chr4g0439441 Rosa chinensis HOM05D004594 ORTHO05D005225 1.6e-80 305.1 841 39.5
FAN22G0563 Fragaria x ananassa HOM05D004594 ORTHO05D005225 1.7e-79 301.6 826 37.5
FAN12G0764 Fragaria x ananassa HOM05D004594 ORTHO05D005225 2.8e-77 294.3 815 38.9
TWI79G0308 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 1.4e-76 292.0 810 40.2
GSVIVG01019950001 Vitis vinifera HOM05D004594 ORTHO05D005225 3.1e-76 290.8 828 35.9
Sabra10G0126400 Salix brachista HOM05D004594 ORTHO05D005225 1.3e-74 285.4 819 40.8
Solyc04g008680.4 Solanum lycopersicum HOM05D004594 ORTHO05D005225 1.7e-74 285.0 806 36.0
Nitab4.5_0000129g0280 Nicotiana tabacum HOM05D004594 ORTHO05D005225 2.9e-74 284.3 802 37.5
Phvul.003G045700 Phaseolus vulgaris HOM05D004594 ORTHO05D005225 2.4e-73 281.2 852 37.3
ECA233G5935 Erigeron canadensis HOM05D004594 ORTHO05D005225 1.6e-72 278.5 828 36.5
MELO3C002967.2 Cucumis melo HOM05D004594 ORTHO05D005225 2.7e-72 277.7 833 36.3
AUR62035898 Chenopodium quinoa HOM05D004594 ORTHO05D005225 1.7e-71 275.0 803 37.1
VMungo1215G3128 Vigna mungo HOM05D004594 ORTHO05D005225 3.0e-71 274.2 856 35.6
Ciclev10030522m.g Citrus clementina HOM05D004594 ORTHO05D005225 8.7e-71 272.7 757 37.1
Glyma.01G051400 Glycine max HOM05D004594 ORTHO05D005225 1.1e-70 272.3 865 35.5
HanXRQChr08g0224741 Helianthus annuus HOM05D004594 ORTHO05D005225 1.5e-70 271.9 813 37.0
HanXRQChr08g0225211 Helianthus annuus HOM05D004594 ORTHO05D005225 1.5e-70 271.9 813 37.0
ClCG09G021930 Citrullus lanatus HOM05D004594 ORTHO05D005225 5.6e-70 270.0 867 34.5
EL10Ac3g06731 Beta vulgaris HOM05D004594 ORTHO05D005225 7.4e-70 269.6 808 37.0
ECA246G2651 Erigeron canadensis HOM05D004594 ORTHO05D005225 4.8e-69 266.9 888 36.3
arahy.Tifrunner.gnm1.ann1.8R27D6 Arachis hypogaea HOM05D004594 ORTHO05D005225 8.1e-69 266.2 864 38.7
Peaxi162Scf00329g00617 Petunia axillaris HOM05D004594 ORTHO05D005225 3.1e-68 264.2 805 40.5
Sed0022637 Sechium edule HOM05D004594 ORTHO05D005225 1.3e-66 258.8 810 36.3
Gorai.012G186600 Gossypium raimondii HOM05D004594 ORTHO05D005225 8.4e-66 256.1 805 40.9
Cc00_g08470 Coffea canephora HOM05D004594 ORTHO05D005225 3.2e-65 254.2 809 32.8
Nn1g04524 Nelumbo nucifera HOM05D004594 ORTHO05D005225 7.1e-65 253.1 824 37.4
arahy.Tifrunner.gnm1.ann1.KB2NSX Arachis hypogaea HOM05D004594 ORTHO05D005225 2.7e-64 251.1 854 39.3
CiPaw.05G132100 Carya illinoinensis HOM05D004594 ORTHO05D005225 2.7e-64 251.1 748 40.8
Gohir.D04G191200 Gossypium hirsutum HOM05D004594 ORTHO05D005225 6.0e-64 250.0 805 40.2
Lsat_1_v5_gn_8_32581 Lactuca sativa HOM05D004594 ORTHO05D005225 1.8e-63 248.4 796 33.0
Glyma.02G109900 Glycine max HOM05D004594 ORTHO05D005225 3.0e-63 247.7 852 37.1
Migut.E00588 Erythranthe guttata HOM05D004594 ORTHO05D005225 1.5e-62 245.4 809 34.2
Ca_04825_v3 Cicer arietinum L. HOM05D004594 ORTHO05D005225 3.3e-62 244.2 846 34.8
Psat2g116320 Pisum sativum HOM05D004594 ORTHO05D005225 3.3e-62 244.2 830 35.9
Lalb_Chr10g0098431 Lupinus albus HOM05D004594 ORTHO05D005225 4.3e-62 243.8 864 36.7
PSO832G1080 Papaver somniferum HOM05D004594 ORTHO05D005225 5.6e-62 243.4 838 34.2
Oeu044046.4 Olea europaea HOM05D004594 ORTHO05D005225 3.7e-61 240.7 792 33.7
Medtr5g042000 Medicago truncatula HOM05D004594 ORTHO05D005225 3.8e-58 230.7 898 35.1
Lsat_1_v5_gn_3_33900 Lactuca sativa HOM05D004594 ORTHO05D005225 8.4e-58 229.6 806 35.7
CDE07G1889 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 1.1e-57 229.2 775 30.6
Hund25219 Selenicereus undatus HOM05D004594 ORTHO05D005225 1.9e-57 228.4 802 34.7
PSO013G0146 Papaver somniferum HOM05D004594 ORTHO05D005225 2.7e-56 224.6 796 32.0
ATR0564G229 Amborella trichopoda HOM05D004594 ORTHO05D005225 1.5e-54 218.8 822 33.8
Ah.13g075020 Amaranthus hybridus HOM05D004594 ORTHO05D005225 1.4e-52 212.2 815 32.4
Carub.0005s0198 Capsella rubella HOM05D004594 ORTHO05D005225 5.3e-52 210.3 769 36.2
SGA_v2.0_scaffold140G35452 Striga asiatica HOM05D004594 ORTHO05D005225 5.3e-52 210.3 853 30.6
Lj2g0016635 Lotus japonicus HOM05D004594 ORTHO05D005225 6.9e-52 209.9 842 34.1
PGR119G1944 Punica granatum HOM05D004594 ORTHO05D005225 9.0e-52 209.5 809 37.5
Nitab4.5_0001419g0070 Nicotiana tabacum HOM05D004594 ORTHO05D005225 2.5e-49 201.4 825 33.3
CARHR145490 Cardamine hirsuta HOM05D004594 ORTHO05D005225 1.0e-47 196.1 803 31.3
HanXRQChr14g0429131 Helianthus annuus HOM05D004594 ORTHO05D005225 1.1e-46 192.6 766 35.9
Zm00001eb384230 Zea mays HOM05D004594 ORTHO05D005225 2.5e-46 191.4 822 30.0
Aqoxy3G03454 Aquilegia oxysepala HOM05D004594 ORTHO05D005225 3.3e-46 191.0 806 37.2
THA.LOC104824075 Tarenaya hassleriana HOM05D004594 ORTHO05D005225 9.7e-46 189.5 803 34.1
AUR62035342 Chenopodium quinoa HOM05D004594 ORTHO05D005225 1.3e-45 189.1 786 31.9
CDE04G0114 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 1.4e-44 185.7 762 29.1
AL5G12800 Arabidopsis lyrata HOM05D004594 ORTHO05D005225 1.3e-42 179.1 782 36.3
Zm00001eb277410 Zea mays HOM05D004594 ORTHO05D005225 1.1e-38 166.0 787 33.8
C09p31000 Brassica napus HOM05D004594 ORTHO05D005225 4.3e-38 164.1 764 31.4
Cpa.g.sc25.130 Carica papaya HOM05D004594 ORTHO05D005225 2.2e-37 161.8 847 35.1
Atru.chr11.1748 Acer truncatum HOM05D004594 ORTHO05D005225 3.7e-37 161.0 463 36.7
BcaC04g21505 Brassica carinata HOM05D004594 ORTHO05D005225 8.2e-37 159.8 765 31.4
Actinidia04099 Actinidia chinensis HOM05D004594 ORTHO05D005225 1.8e-36 158.7 383 40.5
Sp2g14100 Schrenkiella parvula HOM05D004594 ORTHO05D005225 3.1e-36 157.9 789 31.2
AT2G03150 Arabidopsis thaliana HOM05D004594 ORTHO05D005225 5.3e-36 157.1 774 33.5
Lj3E852T1 Lonicera japonica HOM05D004594 ORTHO05D005225 3.4e-35 154.5 210 51.0
HanXRQChr17g0540651 Helianthus annuus HOM05D004594 ORTHO05D005225 7.2e-33 146.7 751 34.8
BolC9t55959H Brassica oleracea HOM05D004594 ORTHO05D005225 4.7e-32 144.1 765 30.5
MBI06_g33529_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 2.0e-30 138.7 365 35.6
Lj3A852T53 Lonicera japonica HOM05D004594 ORTHO05D005225 3.3e-30 137.9 146 61.0
Actinidia04098 Actinidia chinensis HOM05D004594 ORTHO05D005225 2.2e-29 135.2 215 47.9
A09p24110 Brassica napus HOM05D004594 ORTHO05D005225 2.2e-29 135.2 758 29.7
BraA09t38011Z Brassica rapa HOM05D004594 ORTHO05D005225 2.2e-29 135.2 758 29.7
BcaB07g30683 Brassica carinata HOM05D004594 ORTHO05D005225 5.3e-28 130.6 758 28.9
Gohir.1Z049616 Gossypium hirsutum HOM05D004594 ORTHO05D005225 2.0e-27 128.6 98 71.4
Sc11g0002090 Simmondsia chinensis HOM05D004594 ORTHO05D005225 2.2e-26 125.2 533 32.5
unitig_52.g17300 Utricularia gibba HOM05D004594 ORTHO05D005225 1.5e-25 122.5 380 38.9
Gohir.1Z049516 Gossypium hirsutum HOM05D004594 ORTHO05D005225 7.2e-25 120.2 383 33.4
TPR.G11445 Trifolium pratense HOM05D004594 ORTHO05D005225 2.3e-23 115.2 64 87.5
BcaC03g17185 Brassica carinata HOM05D004594 ORTHO05D005225 8.8e-23 113.2 108 58.3
Thhalv10005550m.g Eutrema salsugineum HOM05D004594 ORTHO05D005225 8.8e-23 113.2 805 32.0
Lsat_1_v5_gn_3_92661 Lactuca sativa HOM05D004594 ORTHO05D005225 8.8e-23 113.2 98 56.1
SHI24774 Sapria himalayana HOM05D004594 ORTHO05D005225 2.2e-21 108.6 463 29.6
Lj3E852G2 Lonicera japonica HOM05D004594 ORTHO05D005225 4.8e-21 107.5 295 43.4
HPP92_001998 Vanilla planifolia HOM05D004594 ORTHO05D005225 9.1e-20 103.2 532 27.3
Atru.chr11.1750 Acer truncatum HOM05D004594 ORTHO05D005225 1.0e-18 99.8 66 69.7
TPR.G34709 Trifolium pratense HOM05D004594 ORTHO05D005225 1.3e-18 99.4 813 30.6
Lsat_1_v5_gn_4_108040 Lactuca sativa HOM05D004594 ORTHO05D005225 2.9e-18 98.2 69 62.3
BolC2t11204H Brassica oleracea HOM05D004594 ORTHO05D005225 1.8e-15 89.0 772 26.4
Pp3c12_12730 Physcomitrium patens HOM05D004594 ORTHO05D005225 3.0e-15 88.2 343 28.6
SMO172G0003 Selaginella moellendorffii HOM05D004594 ORTHO05D005225 1.2e-14 86.3 346 30.3
Aa31LG2G7300 Aethionema arabicum HOM05D004594 ORTHO05D005225 1.5e-14 85.9 785 26.9
Lsat_1_v5_gn_1_53021 Lactuca sativa HOM05D004594 ORTHO05D005225 4.4e-14 84.3 61 62.3
Mapoly0102s0024 Marchantia polymorpha HOM05D004594 ORTHO05D005225 3.7e-13 81.3 376 27.7
Oeu034639.1 Olea europaea HOM05D004594 ORTHO05D005225 4.8e-13 80.9 326 29.8
SEGI_16638 Sequoiadendron giganteum HOM05D004594 ORTHO05D005225 6.3e-13 80.5 414 31.6
unitig_52.g17301 Utricularia gibba HOM05D004594 ORTHO05D005225 1.1e-12 79.7 110 41.8
SHI24778 Sapria himalayana HOM05D004594 ORTHO05D005225 1.2e-11 76.3 144 43.8
Pp3c4_10880 Physcomitrium patens HOM05D004594 ORTHO05D005225 7.7e-11 73.6 119 37.8
CBR_g5749 Chara braunii HOM05D004594 ORTHO05D005225 6.5e-10 70.5 85 41.2
QL03p068420 Quercus lobata HOM05D004594 ORTHO05D005225 2.1e-08 65.5 293 28.7
AagrBONN_evm.TU.Sc2ySwM_340.1878 Anthoceros agrestis HOM05D004594 ORTHO05D005225 2.3e-07 62.0 64 42.2
Atru.chr11.1749 Acer truncatum HOM05D004594 ORTHO05D005225 4.0e-07 61.2 183 40.4
HPP92_001999 Vanilla planifolia HOM05D004594 ORTHO05D005225 5.7e-06 57.4 83 38.6


User provided reference genes

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