Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09060 Vaccinium macrocarpon HOM05D003612 ORTHO05D004323 5.4e-147 524.2 253 100.0
Rhsim04G0105800 Rhododendron simsii HOM05D003612 ORTHO05D004323 1.2e-122 443.4 263 81.4
CSS0036075 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 4.0e-110 401.7 263 74.1
Actinidia22794 Actinidia chinensis HOM05D003612 ORTHO05D004323 1.3e-103 380.2 261 70.1
Dinv02797 Davidia involucrata HOM05D003612 ORTHO05D004323 2.0e-101 372.9 263 68.8
Dinv39651 Davidia involucrata HOM05D003612 ORTHO05D004323 7.9e-98 360.9 264 67.0
Lj2A386T88 Lonicera japonica HOM05D003612 ORTHO05D004323 4.8e-95 351.7 260 62.7
Actinidia17229 Actinidia chinensis HOM05D003612 ORTHO05D004323 5.3e-86 321.6 229 68.1
Cc06_g17860 Coffea canephora HOM05D003612 ORTHO05D004323 1.1e-83 313.9 259 59.1
TAR369G0285 Trochodendron aralioides HOM05D003612 ORTHO05D004323 1.9e-83 313.2 248 61.3
Manes.04G104200 Manihot esculenta HOM05D003612 ORTHO05D004323 2.1e-82 309.7 266 56.0
GSVIVG01033242001 Vitis vinifera HOM05D003612 ORTHO05D004323 5.1e-81 305.1 253 58.9
MBI16_g21161_MAGBIO Magnolia biondii HOM05D003612 ORTHO05D004323 8.8e-81 304.3 266 55.3
Cc04_g15140 Coffea canephora HOM05D003612 ORTHO05D004323 4.4e-80 302.0 262 55.7
Oeu008170.1 Olea europaea HOM05D003612 ORTHO05D004323 4.4e-80 302.0 253 60.1
Hund23474 Selenicereus undatus HOM05D003612 ORTHO05D004323 5.7e-80 301.6 260 55.8
CsaV3_4G027280 Cucumis sativus L. HOM05D003612 ORTHO05D004323 4.5e-77 292.0 268 56.0
ClCG04G006280 Citrullus lanatus HOM05D003612 ORTHO05D004323 7.7e-77 291.2 266 55.6
Oeu023123.1 Olea europaea HOM05D003612 ORTHO05D004323 1.0e-76 290.8 253 57.7
CSS0050265 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 8.5e-76 287.7 199 68.8
TWI53G1732 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 8.5e-76 287.7 255 57.6
MELO3C025231.2 Cucumis melo HOM05D003612 ORTHO05D004323 2.5e-75 286.2 268 54.5
Migut.B00971 Erythranthe guttata HOM05D003612 ORTHO05D004323 3.2e-75 285.8 252 56.3
Hund15698 Selenicereus undatus HOM05D003612 ORTHO05D004323 5.5e-75 285.0 259 52.5
TWI74G0690 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 5.5e-75 285.0 256 55.5
Sopen10g029960 Solanum pennellii HOM05D003612 ORTHO05D004323 7.2e-75 284.6 265 53.6
PGSC0003DMG400008168 Solanum tuberosum HOM05D003612 ORTHO05D004323 1.6e-74 283.5 265 53.6
Nitab4.5_0000082g0220 Nicotiana tabacum HOM05D003612 ORTHO05D004323 2.1e-74 283.1 265 54.0
Solyc10g079310.2 Solanum lycopersicum HOM05D003612 ORTHO05D004323 2.7e-74 282.7 265 53.2
Potri.017G142200 Populus trichocarpa HOM05D003612 ORTHO05D004323 6.1e-74 281.6 266 52.3
Nitab4.5_0000082g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.8e-73 280.0 265 54.0
Sabra17G0119100 Salix brachista HOM05D003612 ORTHO05D004323 3.9e-73 278.9 262 52.7
Migut.K00098 Erythranthe guttata HOM05D003612 ORTHO05D004323 5.2e-73 278.5 254 54.7
QL11p026785 Quercus lobata HOM05D003612 ORTHO05D004323 5.2e-73 278.5 267 54.7
Ciclev10005938m.g Citrus clementina HOM05D003612 ORTHO05D004323 6.7e-73 278.1 270 54.4
DCAR_030722 Daucus carota HOM05D003612 ORTHO05D004323 6.7e-73 278.1 264 53.0
PGR004G2683 Punica granatum HOM05D003612 ORTHO05D004323 2.0e-72 276.6 255 52.9
CAN.G641.26 Capsicum annuum HOM05D003612 ORTHO05D004323 3.3e-72 275.8 265 52.1
Nn1g01643 Nelumbo nucifera HOM05D003612 ORTHO05D004323 7.4e-72 274.6 253 55.7
SalBow1G2865 Salvia bowleyana HOM05D003612 ORTHO05D004323 1.3e-71 273.9 244 55.7
Eucgr.B02734 Eucalyptus grandis HOM05D003612 ORTHO05D004323 1.7e-71 273.5 264 54.2
QL07p002913 Quercus lobata HOM05D003612 ORTHO05D004323 1.7e-71 273.5 267 53.6
Sed0024079 Sechium edule HOM05D003612 ORTHO05D004323 3.7e-71 272.3 265 52.8
Cpa.g.sc182.7 Carica papaya HOM05D003612 ORTHO05D004323 4.8e-71 271.9 249 56.6
Nitab4.5_0010316g0020 Nicotiana tabacum HOM05D003612 ORTHO05D004323 4.8e-71 271.9 265 52.5
SGA_v2.0_scaffold94G28492 Striga asiatica HOM05D003612 ORTHO05D004323 6.3e-71 271.6 269 52.4
Gorai.002G227800 Gossypium raimondii HOM05D003612 ORTHO05D004323 8.2e-71 271.2 258 53.9
Cfa016791 Carpinus fangiana HOM05D003612 ORTHO05D004323 3.1e-70 269.2 270 54.4
CiPaw.09G039700 Carya illinoinensis HOM05D003612 ORTHO05D004323 3.1e-70 269.2 268 52.2
Eucgr.A02322 Eucalyptus grandis HOM05D003612 ORTHO05D004323 9.1e-70 267.7 264 52.7
VMungo1309G0648 Vigna mungo HOM05D003612 ORTHO05D004323 1.2e-69 267.3 261 50.6
Lj1g0003709 Lotus japonicus HOM05D003612 ORTHO05D004323 3.5e-69 265.8 254 52.4
Nitab4.5_0000912g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 4.5e-69 265.4 263 51.3
Peaxi162Scf00059g01812 Petunia axillaris HOM05D003612 ORTHO05D004323 4.5e-69 265.4 267 50.9
Lsat_1_v5_gn_7_11501 Lactuca sativa HOM05D000048 ORTHO05D000436 1.3e-68 263.8 229 55.5
Gohir.A01G194000 Gossypium hirsutum HOM05D003612 ORTHO05D004323 2.2e-68 263.1 258 52.7
HanXRQChr04g0113101 Helianthus annuus HOM05D003612 ORTHO05D004323 5.0e-68 261.9 216 59.3
MSTRG.26129 Avicennia marina HOM05D003612 ORTHO05D004323 6.5e-68 261.5 252 51.6
arahy.Tifrunner.gnm1.ann1.GM1CB9 Arachis hypogaea HOM05D003612 ORTHO05D004323 1.9e-67 260.0 267 50.9
arahy.Tifrunner.gnm1.ann1.65NHSX Arachis hypogaea HOM05D003612 ORTHO05D004323 3.2e-67 259.2 267 50.6
CANSAT80G2682 Cannabis sativa HOM05D003612 ORTHO05D004323 2.1e-66 256.5 238 49.6
Psat3g074360 Pisum sativum HOM05D003612 ORTHO05D004323 2.1e-66 256.5 267 50.6
Dinv02795 Davidia involucrata HOM05D003612 ORTHO05D004323 6.1e-66 255.0 183 67.2
Prupe.7G055000 Prunus persica HOM05D003612 ORTHO05D004323 8.0e-66 254.6 266 51.1
THA.LOC104802043 Tarenaya hassleriana HOM05D003612 ORTHO05D004323 1.0e-65 254.2 256 50.8
Aqoxy7G03372 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 3.0e-65 252.7 265 47.9
TPR.G18234 Trifolium pratense HOM05D003612 ORTHO05D004323 5.2e-65 251.9 257 48.2
Medtr8g090105 Medicago truncatula HOM05D003612 ORTHO05D004323 6.7e-65 251.5 270 47.0
Nn8g39441 Nelumbo nucifera HOM05D003612 ORTHO05D004323 6.7e-65 251.5 236 53.8
AT3G57360 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 8.8e-65 251.1 257 47.9
ECA236G0894 Erigeron canadensis HOM05D003612 ORTHO05D004323 8.8e-65 251.1 251 52.2
Lj6g0010730 Lotus japonicus HOM05D003612 ORTHO05D004323 2.6e-64 249.6 219 54.3
MD12G1080400 Malus domestica HOM05D003612 ORTHO05D004323 5.7e-64 248.4 244 51.2
TPR.G6202 Trifolium pratense HOM05D003612 ORTHO05D004323 5.7e-64 248.4 269 47.2
AL5G38900 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 7.5e-64 248.1 261 49.0
Nitab4.5_0004416g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.3e-63 247.3 249 50.2
Carub.0005s2421 Capsella rubella HOM05D003612 ORTHO05D004323 3.7e-63 245.7 261 47.5
PSO210G2319 Papaver somniferum HOM05D003612 ORTHO05D004323 3.7e-63 245.7 267 48.3
Aqoxy7G03834 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 6.3e-63 245.0 268 46.6
Lalb_Chr20g0110641 Lupinus albus HOM05D003612 ORTHO05D004323 6.3e-63 245.0 271 48.0
CARHR167560 Cardamine hirsuta HOM05D003612 ORTHO05D004323 1.4e-62 243.8 258 48.4
Sp5g05240 Schrenkiella parvula HOM05D003612 ORTHO05D004323 1.4e-62 243.8 262 48.5
BcaC02g09930 Brassica carinata HOM05D003612 ORTHO05D004323 4.1e-62 242.3 253 49.0
C04p35070 Brassica napus HOM05D003612 ORTHO05D004323 4.1e-62 242.3 253 49.0
BolC4t25063H Brassica oleracea HOM05D003612 ORTHO05D004323 4.1e-62 242.3 253 49.0
BraA04t16040Z Brassica rapa HOM05D003612 ORTHO05D004323 7.0e-62 241.5 253 48.2
VMungo1383G3573 Vigna mungo HOM05D003612 ORTHO05D004323 1.2e-61 240.7 245 49.4
AL3G11670 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 5.9e-61 238.4 238 50.8
SHI13547 Sapria himalayana HOM05D003612 ORTHO05D004323 5.9e-61 238.4 264 46.2
Carub.0001s3481 Capsella rubella HOM05D003612 ORTHO05D004323 1.0e-60 237.7 261 46.7
A09p50260 Brassica napus HOM05D003612 ORTHO05D004323 1.3e-60 237.3 256 48.0
BraA09t40476Z Brassica rapa HOM05D003612 ORTHO05D004323 1.3e-60 237.3 256 48.0
COL.COLO4_19254 Corchorus olitorius HOM05D003612 ORTHO05D004323 1.3e-60 237.3 268 47.4
ATR0829G008 Amborella trichopoda HOM05D003612 ORTHO05D004323 2.9e-60 236.1 314 43.9
Aa31LG1G13790 Aethionema arabicum HOM05D003612 ORTHO05D004323 3.8e-60 235.7 258 47.7
FAN02G1760 Fragaria x ananassa HOM05D003612 ORTHO05D004323 3.8e-60 235.7 247 47.4
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 5.0e-60 235.3 247 47.4
C08p32750 Brassica napus HOM05D003612 ORTHO05D004323 6.5e-60 235.0 256 48.0
BolC8t50886H Brassica oleracea HOM05D003612 ORTHO05D004323 6.5e-60 235.0 256 48.0
EL10Ac6g13255 Beta vulgaris HOM05D003612 ORTHO05D004323 1.9e-59 233.4 274 44.5
Os09g0504800 Oryza sativa ssp. japonica HOM05D003612 ORTHO05D004323 3.2e-59 232.6 256 44.9
COL.COLO4_22302 Corchorus olitorius HOM05D003612 ORTHO05D004323 4.2e-59 232.3 268 47.4
Zm00001eb102310 Zea mays HOM05D003612 ORTHO05D004323 4.2e-59 232.3 251 45.8
Phvul.007G088100 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 7.2e-59 231.5 207 54.6
A04p03190 Brassica napus HOM05D003612 ORTHO05D004323 1.2e-58 230.7 275 44.7
Psat7g055720 Pisum sativum HOM05D003612 ORTHO05D004323 1.2e-58 230.7 255 47.5
Ca_08432_v3 Cicer arietinum L. HOM05D003612 ORTHO05D004323 1.6e-58 230.3 257 46.3
AUR62029731 Chenopodium quinoa HOM05D003612 ORTHO05D004323 2.1e-58 229.9 285 41.8
RcHm_v2.0_Chr3g0483371 Rosa chinensis HOM05D003612 ORTHO05D004323 2.1e-58 229.9 264 46.2
ClCG10G015700 Citrullus lanatus HOM05D003612 ORTHO05D004323 6.1e-58 228.4 243 50.6
PSO210G3983 Papaver somniferum HOM05D003612 ORTHO05D004323 6.1e-58 228.4 251 48.6
Thhalv10006455m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 8.0e-58 228.0 252 46.8
PSO648G0079 Papaver somniferum HOM05D003612 ORTHO05D004323 2.3e-57 226.5 261 47.9
HPP92_020032 Vanilla planifolia HOM05D003612 ORTHO05D004323 2.3e-57 226.5 209 48.8
Aa31LG10G12210 Aethionema arabicum HOM05D000708 ORTHO05D004323 1.5e-56 223.8 251 45.0
unitig_52.g17667 Utricularia gibba HOM05D003612 ORTHO05D004323 2.6e-56 223.0 236 49.6
Thhalv10009639m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 3.4e-56 222.6 258 45.3
Thecc.05G151100 Theobroma cacao HOM05D003612 ORTHO05D004323 4.4e-56 222.2 211 53.6
Ah.03g134750 Amaranthus hybridus HOM05D003612 ORTHO05D004323 2.8e-55 219.5 274 44.5
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 3.7e-55 219.2 233 51.1
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 4.8e-55 218.8 233 51.1
PSO339G0745 Papaver somniferum HOM05D003612 ORTHO05D004323 4.8e-55 218.8 235 50.6
Haze_19817 Corylus avellana HOM05D003612 ORTHO05D004323 1.1e-54 217.6 280 46.4
BcaC07g40390 Brassica carinata HOM05D003612 ORTHO05D004323 4.1e-54 215.7 207 52.7
Sopen03g026320 Solanum pennellii HOM05D003612 ORTHO05D004323 4.1e-54 215.7 201 51.7
Haze_19820 Corylus avellana HOM05D003612 ORTHO05D004323 7.0e-54 214.9 279 46.2
Phvul.008G158112 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 9.1e-54 214.5 217 50.2
AUR62032829 Chenopodium quinoa HOM05D003612 ORTHO05D004323 5.9e-53 211.8 272 41.5
Thhalv10008553m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 5.9e-53 211.8 204 49.5
FvH4_6g24380 Fragaria vesca HOM05D003612 ORTHO05D004323 3.8e-52 209.1 233 44.6
AT3G02370 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 6.5e-52 208.4 207 50.7
Prupe.5G048800 Prunus persica HOM05D003612 ORTHO05D004323 8.6e-52 208.0 213 48.4
Thhalv10009908m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 1.1e-51 207.6 255 44.3
BcaB02g08320 Brassica carinata HOM05D003612 ORTHO05D004323 1.5e-51 207.2 209 47.8
Sopen03g026330 Solanum pennellii HOM05D003612 ORTHO05D004323 2.8e-50 203.0 299 40.8
Sc04g0007910 Simmondsia chinensis HOM05D003612 ORTHO05D004323 8.0e-50 201.4 178 53.9
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 2.3e-49 199.9 224 44.2
BolC8t50888H Brassica oleracea HOM05D003612 ORTHO05D004323 4.0e-49 199.1 260 43.1
PGSC0003DMG400011936 Solanum tuberosum HOM05D003612 ORTHO05D004323 2.0e-48 196.8 265 41.1
TAR369G0664 Trochodendron aralioides HOM05D003612 ORTHO05D004323 1.4e-46 190.7 167 53.3
Duzib128G0868 Durio zibethinus HOM05D003612 ORTHO05D004323 3.1e-46 189.5 268 42.5
CSS0020602 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 1.0e-44 184.5 179 55.3
Gohir.D01G184300 Gossypium hirsutum HOM05D003612 ORTHO05D004323 8.6e-44 181.4 173 52.0
Glyma.07G129400 Glycine max HOM05D003612 ORTHO05D004323 1.5e-43 180.6 272 37.9
CDE09G0671 Ceratophyllum demersum HOM05D003612 ORTHO05D004323 3.3e-43 179.5 234 45.3
Eucgr.A02319 Eucalyptus grandis HOM05D003612 ORTHO05D004323 7.3e-43 178.3 254 42.9
GSVIVG01033245001 Vitis vinifera HOM05D003612 ORTHO05D004323 1.0e-41 174.5 151 57.0
PSO339G0740 Papaver somniferum HOM05D003612 ORTHO05D004323 2.3e-41 173.3 183 49.2
Peaxi162Scf00244g00019 Petunia axillaris HOM05D003612 ORTHO05D004323 5.2e-41 172.2 178 47.8
AUR62005836 Chenopodium quinoa HOM05D000760 ORTHO05D004323 2.0e-40 170.2 249 38.6
Lj1C1128T4 Lonicera japonica HOM05D003612 ORTHO05D004323 2.0e-40 170.2 159 52.2
MD14G1076600 Malus domestica HOM05D003612 ORTHO05D004323 4.4e-40 169.1 234 41.9
AagrBONN_evm.TU.Sc2ySwM_368.1563 Anthoceros agrestis HOM05D003612 ORTHO05D004323 4.1e-38 162.5 302 32.5
SGA_v2.0_scaffold1G00588 Striga asiatica HOM05D003612 ORTHO05D004323 1.6e-37 160.6 211 42.2
BcaNung07094 Brassica carinata HOM05D003612 ORTHO05D004323 6.0e-37 158.7 158 49.4
SMO364G0364 Selaginella moellendorffii HOM05D003612 ORTHO05D004323 1.5e-35 154.1 211 38.4
PSO339G6630 Papaver somniferum HOM05D003612 ORTHO05D004323 6.2e-34 148.7 222 41.4
Mapoly0007s0121 Marchantia polymorpha HOM05D003612 ORTHO05D004323 8.9e-33 144.8 318 30.2
Nn2g10440 Nelumbo nucifera HOM05D003612 ORTHO05D004323 5.8e-32 142.1 125 55.2
Ah.02g117470 Amaranthus hybridus HOM05D003612 ORTHO05D004323 6.4e-31 138.7 235 36.2
Pp3c3_37380 Physcomitrium patens HOM05D003612 ORTHO05D004323 6.4e-31 138.7 223 35.4
MELO3C030712.2 Cucumis melo HOM05D003612 ORTHO05D004323 4.1e-30 136.0 130 53.8
C08p32770 Brassica napus HOM05D003612 ORTHO05D004323 5.6e-27 125.6 253 34.0
SEGI_02185 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 1.6e-26 124.0 240 32.1
BcaNung07092 Brassica carinata HOM05D003612 ORTHO05D004323 2.8e-26 123.2 252 33.7
Solyc03g096220.3 Solanum lycopersicum HOM05D003612 ORTHO05D004323 1.8e-25 120.6 85 63.5
Nitab4.5_0001598g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 8.9e-25 118.2 184 39.1
Eucgr.A02317 Eucalyptus grandis HOM05D003612 ORTHO05D004323 1.5e-24 117.5 81 65.4
Glyma.19G136600 Glycine max HOM05D003612 ORTHO05D004323 2.0e-24 117.1 246 33.7
PSO339G4790 Papaver somniferum HOM05D003612 ORTHO05D004323 3.7e-23 112.8 168 39.9
RcHm_v2.0_Chr1g0361791 Rosa chinensis HOM05D003612 ORTHO05D004323 5.1e-20 102.4 128 47.7
PGSC0003DMG400013536 Solanum tuberosum HOM05D003612 ORTHO05D004323 1.1e-19 101.3 87 58.6
Duzib093G1009 Durio zibethinus HOM05D003612 ORTHO05D004323 4.1e-14 82.8 74 51.4
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 2.1e-13 80.5 128 39.1
Lj1A1128T58 Lonicera japonica HOM05D003612 ORTHO05D004323 4.6e-13 79.3 47 76.6
Peaxi162Scf00002g03215 Petunia axillaris HOM05D003612 ORTHO05D004323 7.8e-13 78.6 136 36.0
SEGI_36865 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 1.7e-12 77.4 74 52.7
Glyma.03G134401 Glycine max HOM05D003612 ORTHO05D004323 6.6e-12 75.5 62 51.6
CBR_g2822 Chara braunii HOM05D000019 ORTHO05D000048 8.7e-12 75.1 112 37.5
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 2.8e-10 70.1 120 36.7
QL07p002858 Quercus lobata HOM05D003612 ORTHO05D004323 3.1e-09 66.6 87 41.4
Actinidia09310 Actinidia chinensis HOM05D003612 ORTHO05D004323 1.5e-08 64.3 45 64.4
Lj1A1127T48 Lonicera japonica HOM05D003612 ORTHO05D004323 2.0e-08 63.9 43 62.8
CsaV3_3G040730 Cucumis sativus L. HOM05D003612 ORTHO05D004323 2.2e-07 60.5 64 54.7
GSVIVG01033244001 Vitis vinifera HOM05D003612 ORTHO05D004323 6.4e-07 58.9 54 55.6
Cfa015703 Carpinus fangiana HOM05D003612 ORTHO05D004323 8.4e-07 58.5 39 66.7


User provided reference genes

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