Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro09025 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 0.0e+00 1372.8 755 100.0
Rhsim04G0111000 Rhododendron simsii HOM05D003729 ORTHO05D004384 0.0e+00 1155.2 735 84.6
Actinidia38159 Actinidia chinensis HOM05D003729 ORTHO05D004384 7.4e-309 1063.5 735 79.9
CSS0000349 Camellia sinensis var. sinensis HOM05D003729 ORTHO05D004384 9.6e-309 1063.1 735 78.1
Dinv26813 Davidia involucrata HOM05D003729 ORTHO05D004384 4.0e-307 1057.7 749 75.2
Dinv34365 Davidia involucrata HOM05D003729 ORTHO05D004384 1.4e-304 1049.3 750 74.4
GSVIVG01033615001 Vitis vinifera HOM05D003729 ORTHO05D004384 9.3e-296 1020.0 735 73.3
Hma1.2p1_0402F.1_g145090 Hydrangea macrophylla HOM05D003729 ORTHO05D004384 3.5e-295 1018.1 736 72.8
TAR629G1039 Trochodendron aralioides HOM05D003729 ORTHO05D004384 4.8e-292 1007.7 735 72.5
Cc06_g19080 Coffea canephora HOM05D003729 ORTHO05D004384 3.4e-290 1001.5 729 73.1
Eucgr.B01227 Eucalyptus grandis HOM05D003729 ORTHO05D004384 3.4e-290 1001.5 738 72.2
CiPaw.09G047000 Carya illinoinensis HOM05D003729 ORTHO05D004384 3.6e-287 991.5 735 70.6
QL06p031735 Quercus lobata HOM05D003729 ORTHO05D004384 3.3e-285 984.9 737 70.4
Nitab4.5_0005447g0050 Nicotiana tabacum HOM05D003729 ORTHO05D004384 2.8e-284 981.9 734 71.7
Sopen10g034990 Solanum pennellii HOM05D003729 ORTHO05D004384 5.9e-282 974.2 730 69.9
Manes.15G116200 Manihot esculenta HOM05D003729 ORTHO05D004384 3.8e-281 971.5 730 69.6
Nn7g37723 Nelumbo nucifera HOM05D003729 ORTHO05D004384 1.6e-279 966.1 738 69.2
DCAR_013638 Daucus carota HOM05D003729 ORTHO05D004384 2.1e-279 965.7 733 70.0
CAN.G1099.5 Capsicum annuum HOM05D003729 ORTHO05D004384 5.1e-278 961.1 736 69.2
PGR031G2313 Punica granatum HOM05D003729 ORTHO05D004384 6.7e-278 960.7 739 70.2
HanXRQChr12g0359771 Helianthus annuus HOM05D003729 ORTHO05D004384 9.7e-277 956.8 735 70.1
Peaxi162Scf00146g00613 Petunia axillaris HOM05D003729 ORTHO05D004384 3.7e-276 954.9 734 68.9
Lsat_1_v5_gn_5_75341 Lactuca sativa HOM05D003729 ORTHO05D004384 4.8e-276 954.5 749 68.6
Prupe.5G014500 Prunus persica HOM05D003729 ORTHO05D004384 1.6e-274 949.5 735 68.8
HanXRQChr10g0311271 Helianthus annuus HOM05D003729 ORTHO05D004384 2.6e-274 948.7 732 70.4
Aqoxy3G00221 Aquilegia oxysepala HOM05D003729 ORTHO05D004384 1.5e-272 943.0 735 68.2
Atru.chr11.1446 Acer truncatum HOM05D003729 ORTHO05D004384 3.2e-272 941.8 742 68.7
Atru.chr11.1476 Acer truncatum HOM05D003729 ORTHO05D004384 3.2e-272 941.8 742 68.7
Prupe.8G004300 Prunus persica HOM05D003729 ORTHO05D004384 1.5e-269 932.9 766 66.1
Cfa020012 Carpinus fangiana HOM05D003729 ORTHO05D004384 9.7e-269 930.2 737 68.1
Gohir.D11G323300 Gossypium hirsutum HOM05D003729 ORTHO05D004384 3.7e-268 928.3 740 66.1
Gorai.007G353300 Gossypium raimondii HOM05D003729 ORTHO05D004384 3.7e-268 928.3 740 66.1
EL10Ac3g07219 Beta vulgaris HOM05D003729 ORTHO05D004384 1.1e-267 926.8 739 66.8
COL.COLO4_31341 Corchorus olitorius HOM05D003729 ORTHO05D004384 2.4e-267 925.6 722 67.2
Gohir.A11G307900 Gossypium hirsutum HOM05D003729 ORTHO05D004384 3.1e-267 925.2 740 66.5
Duzib106G1244 Durio zibethinus HOM05D003729 ORTHO05D004384 1.6e-266 922.9 739 65.9
RcHm_v2.0_Chr6g0270881 Rosa chinensis HOM05D003729 ORTHO05D004384 1.7e-265 919.5 736 68.6
FvH4_2g11640 Fragaria vesca HOM05D003729 ORTHO05D004384 4.2e-264 914.8 738 66.7
ECA234G1736 Erigeron canadensis HOM05D003729 ORTHO05D004384 4.7e-263 911.4 734 66.2
ClCG09G015010 Citrullus lanatus HOM05D003729 ORTHO05D004384 2.3e-262 909.1 739 64.7
arahy.Tifrunner.gnm1.ann1.UC9EW5 Arachis hypogaea HOM05D003729 ORTHO05D004384 7.5e-261 904.0 736 65.1
VMungo0464G0714 Vigna mungo HOM05D003729 ORTHO05D004384 1.3e-260 903.3 737 64.3
Glyma.09G171000 Glycine max HOM05D003729 ORTHO05D004384 2.8e-260 902.1 740 64.3
Glyma.07G106900 Glycine max HOM05D003729 ORTHO05D004384 6.3e-260 901.0 740 64.6
Migut.N03364 Erythranthe guttata HOM05D003729 ORTHO05D004384 1.8e-259 899.4 729 68.6
MBI04_g42401_MAGBIO Magnolia biondii HOM05D003729 ORTHO05D004384 3.1e-259 898.7 742 66.4
CsaV3_7G006250 Cucumis sativus L. HOM05D003729 ORTHO05D004384 7.0e-259 897.5 738 64.8
Sed0006249 Sechium edule HOM05D003729 ORTHO05D004384 4.5e-258 894.8 738 64.6
Phvul.004G146700 Phaseolus vulgaris HOM05D003729 ORTHO05D004384 7.7e-258 894.0 740 64.2
AUR62023904 Chenopodium quinoa HOM05D003729 ORTHO05D004384 1.5e-256 889.8 702 67.1
Ah.04g151040 Amaranthus hybridus HOM05D003729 ORTHO05D004384 7.2e-256 887.5 737 64.3
Potri.016G037400 Populus trichocarpa HOM05D003729 ORTHO05D004384 1.2e-255 886.7 739 63.7
Lalb_Chr06g0173631 Lupinus albus HOM05D003729 ORTHO05D004384 8.0e-255 884.0 737 63.1
unitig_27.g24938 Utricularia gibba HOM05D003729 ORTHO05D004384 1.4e-254 883.2 748 63.5
MSTRG.19814 Avicennia marina HOM05D003729 ORTHO05D004384 1.8e-254 882.9 698 68.9
ATR0757G154 Amborella trichopoda HOM05D003729 ORTHO05D004384 3.0e-254 882.1 741 63.2
SGA_v2.0_scaffold149G36565 Striga asiatica HOM05D003729 ORTHO05D004384 1.7e-252 876.3 744 65.9
Ca_11233_v3 Cicer arietinum L. HOM05D003729 ORTHO05D004384 2.8e-252 875.5 751 62.3
PSO782G2431 Papaver somniferum HOM05D003729 ORTHO05D004384 2.4e-251 872.5 737 64.2
PSO478G2512 Papaver somniferum HOM05D003729 ORTHO05D004384 1.6e-250 869.8 737 63.8
Lj6g0002169 Lotus japonicus HOM05D003729 ORTHO05D004384 2.0e-250 869.4 731 63.5
AUR62003735 Chenopodium quinoa HOM05D003729 ORTHO05D004384 5.6e-248 861.3 777 60.6
Sabra16G0044200 Salix brachista HOM05D003729 ORTHO05D004384 5.6e-248 861.3 773 60.7
Sabra16G0039300 Salix brachista HOM05D003729 ORTHO05D004384 1.2e-247 860.1 773 60.8
Thecc.05G137800 Theobroma cacao HOM05D003729 ORTHO05D004384 2.1e-247 859.4 738 63.6
Psat5g246840 Pisum sativum HOM05D003729 ORTHO05D004384 5.2e-246 854.7 731 61.6
Medtr2g081080 Medicago truncatula HOM05D003729 ORTHO05D004384 4.4e-245 851.7 735 61.8
THA.LOC104802558 Tarenaya hassleriana HOM05D003729 ORTHO05D004384 7.5e-245 850.9 738 62.3
Nitab4.5_0000381g0340 Nicotiana tabacum HOM05D003729 ORTHO05D004384 3.3e-240 835.5 1061 48.4
Lj1g0021267 Lotus japonicus HOM05D003729 ORTHO05D004384 4.7e-239 831.6 731 62.0
Aa31LG10G11890 Aethionema arabicum HOM05D003729 ORTHO05D004384 2.9e-236 822.4 739 60.4
HPP92_002023 Vanilla planifolia HOM05D003729 ORTHO05D004384 7.0e-235 817.8 736 59.0
Carub.0005s2373 Capsella rubella HOM05D003729 ORTHO05D004384 3.5e-234 815.5 741 59.8
Ciclev10027979m.g Citrus clementina HOM05D003729 ORTHO05D004384 7.8e-234 814.3 605 69.8
Sp5g05590 Schrenkiella parvula HOM05D003729 ORTHO05D004384 1.0e-233 813.9 743 60.4
AL5G38440 Arabidopsis lyrata HOM05D003729 ORTHO05D004384 3.0e-233 812.4 741 60.1
CARHR167140 Cardamine hirsuta HOM05D003729 ORTHO05D004384 2.5e-232 809.3 743 61.1
CANSAT64G1452 Cannabis sativa HOM05D003729 ORTHO05D004384 3.6e-231 805.4 741 59.9
BolC8t50846H Brassica oleracea HOM05D003729 ORTHO05D004384 8.1e-231 804.3 739 60.4
C08p32320 Brassica napus HOM05D003729 ORTHO05D004384 1.1e-230 803.9 739 60.4
Thhalv10005807m.g Eutrema salsugineum HOM05D003729 ORTHO05D004384 1.1e-230 803.9 742 59.4
BcaC07g40019 Brassica carinata HOM05D003729 ORTHO05D004384 2.3e-230 802.7 739 60.2
BraA09t40443Z Brassica rapa HOM05D003729 ORTHO05D004384 1.1e-227 793.9 742 59.6
A09p49920 Brassica napus HOM05D003729 ORTHO05D004384 1.4e-227 793.5 742 59.6
Sc13g0001200 Simmondsia chinensis HOM05D003729 ORTHO05D004384 1.2e-223 780.4 559 71.6
Zm00001eb373800 Zea mays HOM05D003729 ORTHO05D004384 5.2e-222 775.0 736 56.7
FAN24G0230 Fragaria x ananassa HOM05D003729 ORTHO05D004384 1.0e-217 760.8 738 58.5
BcaC08g44817 Brassica carinata HOM05D003729 ORTHO05D004384 6.6e-217 758.1 747 57.0
BolC6t37563H Brassica oleracea HOM05D003729 ORTHO05D004384 4.3e-216 755.4 747 56.9
A07p23200 Brassica napus HOM05D003729 ORTHO05D004384 4.7e-215 751.9 744 57.1
BraA07t29984Z Brassica rapa HOM05D003729 ORTHO05D004384 4.7e-215 751.9 744 57.1
C06p24040 Brassica napus HOM05D003729 ORTHO05D004384 3.5e-210 735.7 773 54.9
MD06G1011700 Malus domestica HOM05D003729 ORTHO05D004384 1.1e-208 730.7 501 73.5
BcaC07g40088 Brassica carinata HOM05D003729 ORTHO05D004384 1.1e-206 724.2 747 56.1
Mapoly0009s0077 Marchantia polymorpha HOM05D003729 ORTHO05D004384 1.2e-205 720.7 756 54.4
SMO334G0073 Selaginella moellendorffii HOM05D003729 ORTHO05D004384 2.9e-204 716.1 738 52.4
Pp3c18_60 Physcomitrium patens HOM05D003729 ORTHO05D004384 4.0e-198 695.7 763 50.2
Lj1A1094G13 Lonicera japonica HOM05D003729 ORTHO05D004384 3.8e-196 689.1 444 77.5
arahy.Tifrunner.gnm1.ann1.HP2N24 Arachis hypogaea HOM05D003729 ORTHO05D004384 4.2e-195 685.6 594 63.5
AagrBONN_evm.TU.Sc2ySwM_228.5647 Anthoceros agrestis HOM05D003729 ORTHO05D004384 7.9e-194 681.4 722 51.7
TPR.G32867 Trifolium pratense HOM05D003729 ORTHO05D004384 2.3e-193 679.9 881 47.0
AT3G56990 Arabidopsis thaliana HOM05D003729 ORTHO05D004384 5.1e-193 678.7 560 63.4
FAN15G2573 Fragaria x ananassa HOM05D003729 ORTHO05D004384 2.4e-190 669.8 737 53.6
MELO3C018665.2 Cucumis melo HOM05D003729 ORTHO05D004384 5.5e-187 658.7 728 51.6
Os06g0128400 Oryza sativa ssp. japonica HOM05D003729 ORTHO05D004384 6.3e-175 618.6 426 68.8
vmacro10990 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 6.7e-169 598.6 412 79.4
Zm00001eb378550 Zea mays HOM05D003729 ORTHO05D004384 1.7e-156 557.4 580 52.8
CBR_g12410 Chara braunii HOM05D003729 ORTHO05D004384 5.5e-155 552.4 753 42.0
AUR62016564 Chenopodium quinoa HOM05D003729 ORTHO05D004384 8.8e-153 545.0 624 51.0
BcaB02g07627 Brassica carinata HOM05D003729 ORTHO05D004384 6.5e-140 502.3 602 52.2
MCO06G073 Micromonas commoda HOM05D003729 ORTHO05D004384 1.1e-139 501.5 778 42.3
Cre03.g159950 Chlamydomonas reinhardtii HOM05D003729 ORTHO05D004384 3.3e-131 473.4 751 38.1
SEGI_15849 Sequoiadendron giganteum HOM05D003729 ORTHO05D004384 3.7e-127 459.9 489 56.0
Thecc.05G137400 Theobroma cacao HOM05D003729 ORTHO05D004384 9.5e-115 418.7 483 48.7
PRCOL_00000752 Prasinoderma coloniale HOM05D003729 ORTHO05D004384 3.6e-114 416.8 582 40.7
Rhsim06G0100100 Rhododendron simsii HOM05D003729 ORTHO05D004384 1.1e-102 378.6 231 84.4
Thecc.05G137700 Theobroma cacao HOM05D003729 ORTHO05D004384 3.3e-99 367.1 309 62.8
SHI40172 Sapria himalayana HOM05D003729 ORTHO05D004384 5.8e-96 356.3 443 50.3
SHI42965 Sapria himalayana HOM05D003729 ORTHO05D004384 2.4e-81 307.8 409 48.4
vmacro10989 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 4.0e-81 307.0 262 64.5
Cfa025239 Carpinus fangiana HOM05D003729 ORTHO05D004384 2.0e-80 304.7 646 34.4
Lj1A1094G14 Lonicera japonica HOM05D003729 ORTHO05D004384 3.5e-77 293.9 262 68.7
SHI43747 Sapria himalayana HOM05D003729 ORTHO05D004384 4.6e-77 293.5 326 50.6
Atru.chr1.117 Acer truncatum HOM05D003729 ORTHO05D004384 3.9e-76 290.4 706 33.0
Oeu059338.2 Olea europaea HOM05D003729 ORTHO05D004384 7.1e-70 269.6 405 46.7
Cpa.g.sc5.183 Carica papaya HOM05D003729 ORTHO05D004384 1.1e-67 262.3 266 54.9
Haze_16229 Corylus avellana HOM05D003729 ORTHO05D004384 1.6e-66 258.5 269 61.0
SHI45339 Sapria himalayana HOM05D003729 ORTHO05D004384 5.3e-65 253.4 247 55.1
Haze_20214 Corylus avellana HOM05D003729 ORTHO05D004384 1.2e-61 242.3 258 59.7
Haze_20210 Corylus avellana HOM05D003729 ORTHO05D004384 1.4e-60 238.8 258 59.3
Cpa.g.sc1212.1 Carica papaya HOM05D003729 ORTHO05D004384 3.2e-54 217.6 141 75.2
SHI46975 Sapria himalayana HOM05D003729 ORTHO05D004384 3.2e-54 217.6 186 59.7
Thecc.05G138100 Theobroma cacao HOM05D003729 ORTHO05D004384 3.0e-52 211.1 170 64.7
HanXRQChr09g0238921 Helianthus annuus HOM05D003729 ORTHO05D004384 1.0e-47 196.1 106 84.9
Thecc.05G137500 Theobroma cacao HOM05D003729 ORTHO05D004384 1.1e-46 192.6 239 54.0
Haze_20209 Corylus avellana HOM05D003729 ORTHO05D004384 1.8e-41 175.3 102 82.4
Haze_16233 Corylus avellana HOM05D003729 ORTHO05D004384 4.1e-41 174.1 119 70.6
Haze_20213 Corylus avellana HOM05D003729 ORTHO05D004384 5.3e-41 173.7 102 81.4
SEGI_35907 Sequoiadendron giganteum HOM05D003729 ORTHO05D004384 8.5e-39 166.4 129 63.6
Haze_16231 Corylus avellana HOM05D003729 ORTHO05D004384 7.2e-38 163.3 175 51.4
vmacro12362 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 7.2e-38 163.3 79 96.2
AUR62022314 Chenopodium quinoa HOM05D000534 ORTHO05D000389 1.6e-37 162.2 149 55.0
Gohir.A07G111501 Gossypium hirsutum HOM05D003729 ORTHO05D004384 6.7e-36 156.8 102 75.5
Gohir.D02G195125 Gossypium hirsutum HOM05D003729 ORTHO05D004384 6.7e-36 156.8 102 75.5
Gohir.D06G065600 Gossypium hirsutum HOM05D003729 ORTHO05D004384 8.8e-36 156.4 102 75.5
QL07p009838 Quercus lobata HOM05D003729 ORTHO05D004384 1.2e-35 156.0 120 64.2
arahy.Tifrunner.gnm1.ann1.7FD8QN Arachis hypogaea HOM05D003729 ORTHO05D004384 1.5e-35 155.6 216 44.9
SHI44105 Sapria himalayana HOM05D003729 ORTHO05D004384 1.5e-35 155.6 110 65.5
Gohir.D05G190600 Gossypium hirsutum HOM05D003729 ORTHO05D004384 2.6e-35 154.8 85 83.5
Hund24619 Selenicereus undatus HOM05D003729 ORTHO05D004384 3.3e-35 154.5 163 55.8
SHI49287 Sapria himalayana HOM05D003729 ORTHO05D004384 5.7e-35 153.7 230 39.6
Haze_16230 Corylus avellana HOM05D003729 ORTHO05D004384 7.0e-33 146.7 79 84.8
Glyma.03G135700 Glycine max HOM05D003729 ORTHO05D004384 7.0e-33 146.7 217 38.7
Gorai.004G004200 Gossypium raimondii HOM05D003729 ORTHO05D004384 6.5e-31 140.2 142 56.3
Zm00001eb034510 Zea mays HOM05D003729 ORTHO05D004384 8.0e-29 133.3 106 63.2
SHI46293 Sapria himalayana HOM05D003729 ORTHO05D004384 8.8e-28 129.8 70 77.1
SHI45328 Sapria himalayana HOM05D003729 ORTHO05D004384 5.4e-25 120.6 65 75.4
Haze_16235 Corylus avellana HOM05D003729 ORTHO05D004384 5.5e-22 110.5 107 55.1
Sabra16G0029600 Salix brachista HOM05D000075 ORTHO05D000073 2.3e-20 105.1 88 62.5
SHI38377 Sapria himalayana HOM05D003729 ORTHO05D004384 5.2e-20 104.0 62 74.2
SHI50183 Sapria himalayana HOM05D003729 ORTHO05D004384 1.5e-19 102.4 97 52.6
SHI53576 Sapria himalayana HOM05D003729 ORTHO05D004384 2.6e-19 101.7 62 74.2
SHI46294 Sapria himalayana HOM05D003729 ORTHO05D004384 3.4e-19 101.3 70 65.7
SHI51948 Sapria himalayana HOM05D003729 ORTHO05D004384 7.5e-19 100.1 188 42.6
Cpa.g.sc5.181 Carica papaya HOM05D003729 ORTHO05D004384 2.2e-18 98.6 56 83.9
Sabra16G0039200 Salix brachista HOM05D002722 ORTHO05D003076 3.7e-18 97.8 77 61.0
Zm00001eb077600 Zea mays HOM05D001162 ORTHO05D029047 4.1e-17 94.4 69 65.2
Zm00001eb284510 Zea mays HOM05D001162 ORTHO05D001218 5.4e-17 94.0 56 76.8
FvH4_3g33711 Fragaria vesca HOM05D003729 ORTHO05D001837 9.2e-17 93.2 98 51.0
Zm00001eb173210 Zea mays HOM05D001162 ORTHO05D001218 1.2e-16 92.8 56 75.0
Medtr8g007595 Medicago truncatula HOM05D003729 ORTHO05D004384 5.9e-16 90.5 54 77.8
QL01p046327 Quercus lobata HOM05D003729 ORTHO05D004384 3.8e-15 87.8 50 80.0
QL93p0119_0007 Quercus lobata HOM05D003729 ORTHO05D004384 3.8e-15 87.8 50 80.0
SHI44104 Sapria himalayana HOM05D003729 ORTHO05D004384 8.6e-15 86.7 249 37.3
SHI48245 Sapria himalayana HOM05D003729 ORTHO05D004384 1.9e-14 85.5 63 65.1
Sabra16G0022500 Salix brachista HOM05D000075 ORTHO05D000073 3.3e-14 84.7 57 73.7
SHI45329 Sapria himalayana HOM05D003729 ORTHO05D004384 1.2e-13 82.8 47 76.6
Haze_20208 Corylus avellana HOM05D003729 ORTHO05D004384 3.6e-13 81.3 55 69.1
Sabra16G0044400 Salix brachista HOM05D002722 ORTHO05D003076 4.0e-12 77.8 77 50.6
SHI49946 Sapria himalayana HOM05D003729 ORTHO05D004384 1.2e-11 76.3 151 34.4
SHI50413 Sapria himalayana HOM05D003729 ORTHO05D004384 2.0e-11 75.5 202 34.7
Oeu029504.1 Olea europaea HOM05D003729 ORTHO05D004384 1.3e-10 72.8 100 54.0
SHI48244 Sapria himalayana HOM05D003729 ORTHO05D004384 8.3e-10 70.1 51 60.8
THA.LOC104802556 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 8.3e-10 70.1 109 45.0
SHI40171 Sapria himalayana HOM05D003729 ORTHO05D004384 2.4e-09 68.6 71 59.2
Sabra06G0025400 Salix brachista HOM05D003729 ORTHO05D004384 1.2e-08 66.2 142 30.3
SHI50318 Sapria himalayana HOM05D003729 ORTHO05D004384 1.5e-06 59.3 188 31.4
SHI51181 Sapria himalayana HOM05D003729 ORTHO05D004384 7.3e-06 57.0 41 63.4
SHI54010 Sapria himalayana HOM05D003729 ORTHO05D004384 7.3e-06 57.0 34 73.5


User provided reference genes

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