Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08735 Vaccinium macrocarpon HOM05D005309 ORTHO05D006648 1.3e-240 835.9 403 100.0
CSS0009662 Camellia sinensis var. sinensis HOM05D005309 ORTHO05D006648 8.4e-102 374.8 334 60.5
CSS0016258 Camellia sinensis var. sinensis HOM05D005309 ORTHO05D006648 1.6e-100 370.5 334 60.2
Rhsim12G0010200 Rhododendron simsii HOM05D005309 ORTHO05D006648 5.3e-96 355.5 363 57.3
Dinv18821 Davidia involucrata HOM05D005309 ORTHO05D006648 2.9e-94 349.7 358 55.9
Lj1A593G32 Lonicera japonica HOM05D005309 ORTHO05D006648 1.1e-88 331.3 359 52.6
Hma1.2p1_0147F.1_g065840 Hydrangea macrophylla HOM05D005309 ORTHO05D006648 4.5e-87 325.9 350 53.4
Cc05_g01700 Coffea canephora HOM05D005309 ORTHO05D006648 5.9e-87 325.5 352 52.6
Thecc.01G169500 Theobroma cacao HOM05D005309 ORTHO05D006648 5.9e-87 325.5 362 52.2
GSVIVG01020840001 Vitis vinifera HOM05D005309 ORTHO05D006648 5.9e-87 325.5 362 52.5
Gohir.D11G164100 Gossypium hirsutum HOM05D005309 ORTHO05D006648 1.3e-86 324.3 363 51.5
Gorai.007G174900 Gossypium raimondii HOM05D005309 ORTHO05D006648 5.0e-86 322.4 363 51.2
Nn3g20733 Nelumbo nucifera HOM05D005309 ORTHO05D006648 1.4e-85 320.9 369 50.7
COL.COLO4_08888 Corchorus olitorius HOM05D005309 ORTHO05D006648 1.9e-85 320.5 364 50.8
Ciclev10031016m.g Citrus clementina HOM05D005309 ORTHO05D006648 2.5e-85 320.1 362 50.8
Cpa.g.sc50.107 Carica papaya HOM05D005309 ORTHO05D006648 4.2e-85 319.3 365 51.2
Gohir.A11G157100 Gossypium hirsutum HOM05D005309 ORTHO05D006648 5.5e-85 318.9 363 50.7
CiPaw.04G138100 Carya illinoinensis HOM05D005309 ORTHO05D006648 1.2e-84 317.8 361 50.1
QL11p000196 Quercus lobata HOM05D005309 ORTHO05D006648 1.2e-84 317.8 355 52.4
MSTRG.14909 Avicennia marina HOM05D005309 ORTHO05D006648 2.1e-84 317.0 348 51.7
Cfa023077 Carpinus fangiana HOM05D005309 ORTHO05D006648 2.1e-84 317.0 360 50.3
TAR627G0108 Trochodendron aralioides HOM05D005309 ORTHO05D006648 7.9e-84 315.1 364 50.8
Solyc07g045070.3 Solanum lycopersicum HOM05D005309 ORTHO05D006648 2.3e-83 313.5 346 52.0
Sopen07g023630 Solanum pennellii HOM05D005309 ORTHO05D006648 2.3e-83 313.5 346 52.0
Duzib133G0867 Durio zibethinus HOM05D005309 ORTHO05D006648 2.5e-82 310.1 361 49.3
Oeu029978.1 Olea europaea HOM05D005309 ORTHO05D006648 2.5e-82 310.1 355 51.3
Sabra05G0155700 Salix brachista HOM05D005309 ORTHO05D006648 2.5e-82 310.1 352 50.0
Migut.M00059 Erythranthe guttata HOM05D005309 ORTHO05D006648 3.3e-82 309.7 335 51.0
PGR142G1004 Punica granatum HOM05D005309 ORTHO05D006648 4.3e-82 309.3 359 49.9
CsaV3_4G031990 Cucumis sativus L. HOM05D005309 ORTHO05D006648 6.3e-81 305.4 348 50.6
Potri.005G204900 Populus trichocarpa HOM05D005309 ORTHO05D006648 6.3e-81 305.4 352 50.0
ClCG11G016530 Citrullus lanatus HOM05D005309 ORTHO05D006648 8.2e-81 305.1 348 50.6
Medtr5g091110 Medicago truncatula HOM05D005309 ORTHO05D006648 1.4e-80 304.3 352 49.4
THA.LOC104826242 Tarenaya hassleriana HOM05D005309 ORTHO05D006648 1.8e-80 303.9 359 48.2
Actinidia11207 Actinidia chinensis HOM05D005309 ORTHO05D006648 2.4e-80 303.5 335 51.9
Glyma.14G030100 Glycine max HOM05D005309 ORTHO05D006648 2.4e-80 303.5 356 49.7
VMungo0647G1913 Vigna mungo HOM05D005309 ORTHO05D006648 3.1e-80 303.1 352 50.3
Eucgr.K01225 Eucalyptus grandis HOM05D005309 ORTHO05D006648 9.1e-80 301.6 361 49.9
FAN05G5670 Fragaria x ananassa HOM05D005309 ORTHO05D006648 9.1e-80 301.6 358 49.2
HanXRQChr01g0028511 Helianthus annuus HOM05D005309 ORTHO05D006648 1.2e-79 301.2 350 49.1
Phvul.008G194100 Phaseolus vulgaris HOM05D005309 ORTHO05D006648 2.0e-79 300.4 351 49.0
CAN.G275.11 Capsicum annuum HOM05D005309 ORTHO05D006648 3.4e-79 299.7 349 48.7
FAN02G0734 Fragaria x ananassa HOM05D005309 ORTHO05D006648 1.0e-78 298.1 358 48.6
EL10Ac2g04244 Beta vulgaris HOM05D005309 ORTHO05D006648 1.7e-78 297.4 345 50.4
RcHm_v2.0_Chr2g0152091 Rosa chinensis HOM05D005309 ORTHO05D006648 2.2e-78 297.0 363 48.5
arahy.Tifrunner.gnm1.ann1.9TU2QX Arachis hypogaea HOM05D005309 ORTHO05D006648 3.8e-78 296.2 362 48.9
SGA_v2.0_scaffold73G24489 Striga asiatica HOM05D005309 ORTHO05D006648 5.0e-78 295.8 371 47.7
Ah.10g035950 Amaranthus hybridus HOM05D005309 ORTHO05D006648 1.4e-77 294.3 349 49.9
arahy.Tifrunner.gnm1.ann1.JRP0UJ Arachis hypogaea HOM05D005309 ORTHO05D006648 1.4e-77 294.3 362 48.6
A10p05200 Brassica napus HOM05D005309 ORTHO05D006648 1.4e-77 294.3 360 48.1
FAN09G0570 Fragaria x ananassa HOM05D005309 ORTHO05D006648 1.4e-77 294.3 358 48.0
Aqoxy4G00092 Aquilegia oxysepala HOM05D005309 ORTHO05D006648 1.9e-77 293.9 358 48.6
Sp1g05320 Schrenkiella parvula HOM05D005309 ORTHO05D006648 1.9e-77 293.9 355 47.9
BcaNung07076 Brassica carinata HOM05D005309 ORTHO05D006648 2.5e-77 293.5 367 47.4
BolC5t29253H Brassica oleracea HOM05D005309 ORTHO05D006648 2.5e-77 293.5 367 47.4
Nitab4.5_0005142g0020 Nicotiana tabacum HOM05D005309 ORTHO05D006648 2.5e-77 293.5 310 54.8
A08p35920 Brassica napus HOM05D005309 ORTHO05D006648 3.2e-77 293.1 353 48.2
Carub.0001s0593 Capsella rubella HOM05D005309 ORTHO05D006648 4.2e-77 292.7 360 47.5
Ca_06266_v3 Cicer arietinum L. HOM05D005309 ORTHO05D006648 4.2e-77 292.7 361 47.4
Peaxi162Scf00359g00710 Petunia axillaris HOM05D005309 ORTHO05D006648 4.2e-77 292.7 384 46.1
TWI23G0800 Tripterygium wilfordii HOM05D005309 ORTHO05D006648 4.2e-77 292.7 371 46.6
FAN14G4003 Fragaria x ananassa HOM05D005309 ORTHO05D006648 5.5e-77 292.4 326 51.2
C05p04800 Brassica napus HOM05D005309 ORTHO05D006648 7.2e-77 292.0 367 47.4
Hund02144 Selenicereus undatus HOM05D005309 ORTHO05D006648 7.2e-77 292.0 341 50.1
AL1G16590 Arabidopsis lyrata HOM05D005309 ORTHO05D006648 9.4e-77 291.6 360 46.9
BolC8t47061H Brassica oleracea HOM05D005309 ORTHO05D006648 9.4e-77 291.6 351 46.7
Aa31LG1G7660 Aethionema arabicum HOM05D005309 ORTHO05D006648 1.6e-76 290.8 359 47.6
CANSAT64G0469 Cannabis sativa HOM05D005309 ORTHO05D006648 1.6e-76 290.8 372 46.5
Lalb_Chr04g0248901 Lupinus albus HOM05D005309 ORTHO05D006648 1.6e-76 290.8 365 47.1
CARHR006170 Cardamine hirsuta HOM05D005309 ORTHO05D006648 2.7e-76 290.0 357 48.2
C08p02650 Brassica napus HOM05D005309 ORTHO05D006648 3.6e-76 289.7 351 46.4
LjContig00049g0017299 Lotus japonicus HOM05D005309 ORTHO05D006648 3.6e-76 289.7 365 46.8
TPR.G10159 Trifolium pratense HOM05D005309 ORTHO05D006648 3.6e-76 289.7 360 47.5
MD17G1135100 Malus domestica HOM05D005309 ORTHO05D006648 1.0e-75 288.1 360 47.8
AT1G06560 Arabidopsis thaliana HOM05D005309 ORTHO05D006648 1.4e-75 287.7 360 46.7
Thhalv10007146m.g Eutrema salsugineum HOM05D005309 ORTHO05D006648 6.7e-75 285.4 354 48.0
Os08g0365900 Oryza sativa ssp. japonica HOM05D005309 ORTHO05D006648 8.8e-75 285.0 370 47.3
DCAR_016942 Daucus carota HOM05D005309 ORTHO05D006648 1.5e-74 284.3 353 47.9
BraA08t35499Z Brassica rapa HOM05D005309 ORTHO05D006648 2.0e-74 283.9 349 46.7
AUR62012368 Chenopodium quinoa HOM05D005309 ORTHO05D006648 2.0e-74 283.9 349 47.9
Lsat_1_v5_gn_4_26360 Lactuca sativa HOM05D005309 ORTHO05D006648 3.3e-74 283.1 346 47.7
BraA10t42787Z Brassica rapa HOM05D005309 ORTHO05D006648 1.7e-73 280.8 366 46.7
PSO384G0241 Papaver somniferum HOM05D005309 ORTHO05D006648 8.2e-73 278.5 371 45.8
CDE02G3568 Ceratophyllum demersum HOM05D005309 ORTHO05D006648 2.4e-72 276.9 355 49.0
BcaC07g36798 Brassica carinata HOM05D005309 ORTHO05D006648 1.0e-70 271.6 312 48.7
Sc09g0008320 Simmondsia chinensis HOM05D005309 ORTHO05D006648 4.2e-69 266.2 339 46.6
BcaB02g06781 Brassica carinata HOM05D005309 ORTHO05D006648 9.7e-66 255.0 360 43.9
HPP92_023436 Vanilla planifolia HOM05D005309 ORTHO05D006648 2.8e-65 253.4 360 43.6
SMO293G0021 Selaginella moellendorffii HOM05D005309 ORTHO05D006648 9.4e-61 238.4 329 43.8
ECA234G1968 Erigeron canadensis HOM05D005309 ORTHO05D006648 6.1e-60 235.7 345 42.6
FvH4_6g38630 Fragaria vesca HOM05D005309 ORTHO05D006648 6.7e-59 232.3 322 44.7
SalBow7G0619 Salvia bowleyana HOM05D005309 ORTHO05D006648 6.7e-59 232.3 353 41.9
Prupe.3G177300 Prunus persica HOM05D005309 ORTHO05D006648 4.4e-58 229.6 327 45.0
AagrBONN_evm.TU.Sc2ySwM_362.1083 Anthoceros agrestis HOM05D005309 ORTHO05D006648 5.7e-58 229.2 343 42.0
Mapoly0025s0011 Marchantia polymorpha HOM05D005309 ORTHO05D006648 7.5e-58 228.8 350 40.6
Psat2g017040 Pisum sativum HOM05D005309 ORTHO05D006648 2.4e-56 223.8 324 43.2
Sed0027803 Sechium edule HOM05D005309 ORTHO05D006648 3.1e-56 223.4 345 42.9
Atru.chr6.2050 Acer truncatum HOM05D005309 ORTHO05D006648 9.4e-53 211.8 305 43.6
Pp3c12_23090 Physcomitrium patens HOM05D005309 ORTHO05D006648 1.8e-51 207.6 387 36.7
CBR_g38934 Chara braunii HOM05D005309 ORTHO05D006648 7.2e-45 185.7 288 39.9
Aqoxy4G00097 Aquilegia oxysepala HOM05D005309 ORTHO05D006648 4.5e-39 166.4 105 77.1
Nitab4.5_0001552g0030 Nicotiana tabacum HOM05D005309 ORTHO05D006648 3.8e-38 163.3 265 41.9
Lsat_1_v5_gn_3_94440 Lactuca sativa HOM05D005309 ORTHO05D006648 6.6e-38 162.5 99 77.8
Haze_13539 Corylus avellana HOM05D005309 ORTHO05D006648 8.6e-38 162.2 104 75.0
Manes.02G208560 Manihot esculenta HOM05D005309 ORTHO05D006648 8.6e-38 162.2 267 41.2
MELO3C022960.2 Cucumis melo HOM05D005309 ORTHO05D006648 2.5e-37 160.6 264 40.9
MBI07_g26361_MAGBIO Magnolia biondii HOM05D005309 ORTHO05D006648 4.0e-35 153.3 85 82.4
Zm00001eb170650 Zea mays HOM05D005309 ORTHO05D006648 9.8e-34 148.7 278 36.3
unitig_899.g15343 Utricularia gibba HOM05D005309 ORTHO05D006648 1.3e-30 138.3 264 37.1
TPR.G7347 Trifolium pratense HOM05D005309 ORTHO05D006648 3.9e-30 136.7 78 78.2
CSS0010052 Camellia sinensis var. sinensis HOM05D005309 ORTHO05D006648 7.3e-29 132.5 142 55.6
SMO111G0017 Selaginella moellendorffii HOM05D005309 ORTHO05D006648 1.1e-24 118.6 228 35.5
Cre13.g606200 Chlamydomonas reinhardtii HOM05D005309 ORTHO05D006648 2.5e-21 107.5 416 27.4
SEGI_00594 Sequoiadendron giganteum HOM05D005309 ORTHO05D006648 3.6e-20 103.6 141 42.6
SHI03271 Sapria himalayana HOM05D005309 ORTHO05D006648 4.7e-20 103.2 148 41.2
MD09G1148600 Malus domestica HOM05D005309 ORTHO05D006648 1.8e-19 101.3 71 66.2
PSO339G5406 Papaver somniferum HOM05D005309 ORTHO05D006648 2.0e-18 97.8 151 42.4
Lsat_1_v5_gn_4_60740 Lactuca sativa HOM05D005309 ORTHO05D006648 4.1e-16 90.1 150 37.3
Cre11.g476450 Chlamydomonas reinhardtii HOM05D005309 ORTHO05D006648 5.4e-16 89.7 188 35.1
Lsat_1_v5_gn_4_120101 Lactuca sativa HOM05D005309 ORTHO05D006648 3.5e-15 87.0 168 34.5
SHI03272 Sapria himalayana HOM05D000105 ORTHO05D000023 7.6e-10 69.3 43 74.4


User provided reference genes

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