Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 0.0e+00 1284.6 647 100.0
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 0.0e+00 1082.0 655 84.1
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 9.8e-302 1039.6 657 80.8
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 5.5e-297 1023.8 655 80.2
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 6.8e-287 990.3 632 79.9
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 1.7e-282 975.7 655 75.0
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 2.6e-278 961.8 653 73.7
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 2.9e-277 958.4 650 72.8
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 4.1e-276 954.5 653 73.4
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 3.4e-270 934.9 657 71.4
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 4.9e-269 931.0 653 72.1
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 6.4e-269 930.6 655 71.0
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 1.1e-268 929.9 701 67.5
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 1.1e-268 929.9 655 71.1
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 3.2e-268 928.3 655 69.8
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 3.2e-268 928.3 657 70.3
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 5.4e-268 927.5 657 70.3
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 5.4e-268 927.5 657 70.3
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 1.0e-266 923.3 670 71.9
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 1.7e-266 922.5 653 71.2
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 3.0e-266 921.8 657 70.5
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 1.9e-265 919.1 656 70.4
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 5.6e-265 917.5 658 69.1
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 1.2e-264 916.4 652 70.9
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 3.6e-264 914.8 651 70.8
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 9.9e-262 906.7 661 68.5
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 1.3e-261 906.4 653 70.3
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 1.7e-261 906.0 653 68.8
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 1.7e-261 906.0 664 69.4
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 8.4e-261 903.7 662 69.0
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 1.4e-260 902.9 660 68.6
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 1.4e-260 902.9 653 69.4
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 4.1e-260 901.4 653 68.3
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 4.6e-259 897.9 657 69.1
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 7.8e-259 897.1 657 69.1
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 1.0e-258 896.7 656 69.1
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 1.3e-258 896.3 656 67.8
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 3.9e-258 894.8 657 68.2
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 8.7e-258 893.6 633 69.8
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 4.3e-257 891.3 657 68.6
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 7.3e-257 890.6 624 70.7
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 7.3e-257 890.6 655 67.3
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 3.6e-256 888.3 656 68.6
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 4.7e-256 887.9 655 68.7
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 1.1e-255 886.7 634 69.6
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 5.2e-255 884.4 661 68.8
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 9.0e-255 883.6 652 67.5
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 5.8e-254 880.9 618 72.0
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 7.6e-254 880.6 657 67.7
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 1.3e-253 879.8 649 68.9
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 6.4e-253 877.5 657 67.9
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 1.1e-252 876.7 661 67.0
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 1.4e-252 876.3 654 66.8
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 1.6e-251 872.8 657 68.9
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 2.1e-251 872.5 650 66.9
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 6.6e-250 867.5 657 67.7
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 5.6e-249 864.4 657 65.0
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 2.8e-248 862.1 599 71.5
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 8.1e-248 860.5 653 64.3
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 3.1e-247 858.6 671 65.7
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 1.2e-246 856.7 655 66.4
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 1.2e-246 856.7 653 64.8
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 3.4e-246 855.1 653 65.2
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 7.6e-246 854.0 608 70.1
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 2.9e-245 852.0 652 67.5
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 1.9e-244 849.4 650 66.0
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 3.2e-244 848.6 650 66.9
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 1.6e-243 846.3 652 64.1
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 2.7e-243 845.5 653 65.1
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 7.9e-243 844.0 653 66.6
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 5.1e-242 841.3 622 69.3
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 1.1e-241 840.1 648 66.2
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 2.4e-239 832.4 598 68.7
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 1.2e-238 830.1 654 64.8
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 2.0e-238 829.3 660 65.0
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 8.4e-237 823.9 644 65.2
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 1.9e-236 822.8 617 66.5
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 4.6e-235 818.1 650 63.5
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 2.3e-234 815.8 650 63.5
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 6.7e-234 814.3 649 63.2
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 7.4e-233 810.8 654 64.2
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 6.2e-232 807.7 652 63.2
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 6.2e-232 807.7 652 63.2
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 4.0e-231 805.1 649 64.4
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 2.9e-229 798.9 652 62.3
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 3.8e-229 798.5 657 62.6
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 4.5e-222 775.0 582 66.2
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 7.4e-217 757.7 654 58.6
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 6.1e-211 738.0 651 57.3
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 7.4e-209 731.1 625 59.7
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 3.6e-203 712.2 462 77.9
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 1.3e-189 667.2 474 71.7
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 2.8e-176 622.9 651 49.5
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 4.9e-176 622.1 518 62.0
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 3.1e-175 619.4 469 66.7
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 3.4e-169 599.4 439 69.0
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 7.0e-167 591.7 660 47.1
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 1.8e-162 577.0 424 68.6
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 9.9e-145 518.1 629 45.3
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 2.9e-144 516.5 655 44.6
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 6.0e-142 508.8 422 61.6
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 2.8e-139 500.0 441 61.7
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 6.4e-128 462.2 629 43.2
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 7.4e-116 422.2 282 79.8
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 4.8e-115 419.5 440 55.2
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 3.2e-103 380.2 791 32.4
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 4.7e-54 216.9 185 59.5
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 2.1e-46 191.4 176 54.0
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.0e-40 172.6 152 53.9
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 7.3e-39 166.4 233 41.2
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 6.2e-38 163.3 163 53.4
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 2.4e-34 151.4 82 86.6
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 3.6e-22 110.9 80 72.5
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 8.4e-19 99.8 97 51.5
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 1.6e-17 95.5 81 60.5
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 3.5e-09 67.8 47 68.1
MD13G1179000 Malus domestica HOM05D002762 ORTHO05D030920 3.5e-09 67.8 39 74.4
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 3.3e-07 61.2 43 72.1


User provided reference genes

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