Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 8.7e-204 713.4 350 100.0
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 2.4e-190 668.7 370 90.8
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 1.3e-175 619.8 366 83.9
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 5.5e-174 614.4 370 84.3
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 1.2e-173 613.2 367 82.6
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 2.1e-173 612.5 368 83.2
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 3.6e-173 611.7 368 82.3
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 7.9e-173 610.5 368 82.1
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 1.0e-172 610.1 364 83.5
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 1.8e-172 609.4 368 82.1
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 1.8e-172 609.4 371 80.9
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 3.0e-172 608.6 371 80.9
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 3.9e-172 608.2 366 82.2
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 8.7e-172 607.1 371 80.6
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 1.1e-171 606.7 366 82.0
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 2.5e-171 605.5 368 81.5
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 3.3e-171 605.1 359 83.3
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 3.3e-171 605.1 368 82.3
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 3.3e-171 605.1 368 82.1
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 7.4e-171 604.0 369 80.2
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 7.4e-171 604.0 382 79.6
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 7.4e-171 604.0 366 82.2
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 9.7e-171 603.6 359 83.3
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 9.7e-171 603.6 367 82.3
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 2.8e-170 602.1 368 81.0
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 3.7e-170 601.7 366 81.1
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 3.7e-170 601.7 368 81.2
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 1.8e-169 599.4 368 80.4
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 5.3e-169 597.8 369 81.8
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 1.2e-168 596.7 364 79.7
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 1.5e-168 596.3 368 81.0
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 2.6e-168 595.5 366 81.4
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 4.5e-168 594.7 371 80.6
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 5.9e-168 594.3 368 81.0
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 5.9e-168 594.3 368 79.9
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 7.7e-168 594.0 368 81.2
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 1.3e-167 593.2 368 80.4
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.7e-167 592.8 370 81.6
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 3.8e-167 591.7 366 81.4
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 3.8e-167 591.7 386 78.5
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 5.0e-167 591.3 369 79.7
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 6.5e-167 590.9 368 81.0
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 6.5e-167 590.9 366 81.1
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 6.5e-167 590.9 366 81.1
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 6.5e-167 590.9 369 79.9
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 1.9e-166 589.3 366 80.3
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 2.5e-166 589.0 369 79.7
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 4.2e-166 588.2 368 79.6
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 4.2e-166 588.2 366 80.1
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 5.5e-166 587.8 375 79.5
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 5.5e-166 587.8 368 79.1
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 5.5e-166 587.8 369 79.4
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 9.4e-166 587.0 349 83.7
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 9.4e-166 587.0 361 80.6
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 1.2e-165 586.6 368 79.3
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.6e-165 586.3 368 79.3
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 1.6e-165 586.3 368 79.3
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 1.6e-165 586.3 368 80.4
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 2.1e-165 585.9 368 80.4
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 2.7e-165 585.5 368 80.2
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 1.0e-164 583.6 369 78.9
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 1.4e-164 583.2 369 78.9
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.4e-164 583.2 369 79.1
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.4e-164 583.2 369 79.1
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 1.8e-164 582.8 362 79.8
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 3.0e-164 582.0 369 78.9
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 8.8e-164 580.5 371 78.2
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 8.8e-164 580.5 395 74.9
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 1.1e-163 580.1 407 73.0
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 1.5e-163 579.7 369 77.5
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 2.6e-163 578.9 369 78.9
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 3.3e-163 578.6 366 80.1
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 3.3e-163 578.6 368 78.3
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 5.7e-163 577.8 367 78.2
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 9.7e-163 577.0 367 77.9
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 9.7e-163 577.0 367 79.3
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 1.3e-162 576.6 364 79.4
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 3.7e-162 575.1 354 79.4
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 1.1e-161 573.5 368 77.4
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 1.8e-161 572.8 364 78.3
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 6.9e-161 570.9 365 78.9
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 1.2e-160 570.1 359 79.7
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 1.2e-160 570.1 366 75.7
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 1.2e-160 570.1 366 78.7
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 5.9e-160 567.8 367 78.5
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 7.7e-160 567.4 367 78.5
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 7.7e-160 567.4 359 79.1
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 7.7e-160 567.4 364 78.6
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 1.0e-159 567.0 364 77.7
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 2.2e-159 565.8 367 78.2
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 2.9e-159 565.5 368 79.3
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 3.8e-159 565.1 368 76.6
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 3.8e-159 565.1 368 76.9
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 5.0e-159 564.7 368 76.4
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 6.5e-159 564.3 368 76.6
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 8.5e-159 563.9 368 75.3
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 1.9e-158 562.8 367 76.6
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 3.2e-158 562.0 363 77.4
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 3.2e-158 562.0 430 68.8
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 5.5e-158 561.2 367 76.6
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 5.5e-158 561.2 362 76.5
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 7.2e-158 560.8 367 76.8
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 1.6e-157 559.7 366 75.7
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 8.0e-157 557.4 362 76.0
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 8.0e-157 557.4 362 76.0
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 8.0e-157 557.4 362 76.0
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 8.0e-157 557.4 362 76.0
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 8.0e-157 557.4 362 76.0
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 1.8e-156 556.2 365 77.0
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 8.8e-156 553.9 369 76.2
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 3.3e-155 552.0 368 75.5
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 4.4e-155 551.6 354 77.1
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 9.7e-155 550.4 370 77.0
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 2.2e-154 549.3 398 72.1
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 8.2e-154 547.4 366 73.0
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 1.1e-153 547.0 346 79.5
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 2.4e-153 545.8 355 78.0
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 3.1e-153 545.4 366 73.2
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 4.5e-152 541.6 336 79.8
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 2.9e-151 538.9 367 74.7
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 4.7e-149 531.6 369 72.9
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 6.1e-149 531.2 347 77.2
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 1.8e-148 529.6 367 73.3
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 2.3e-148 529.3 363 74.1
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 4.0e-148 528.5 367 73.3
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 2.6e-147 525.8 362 74.6
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 1.3e-146 523.5 374 73.0
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 3.7e-146 521.9 365 72.1
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 4.8e-146 521.5 349 74.8
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 8.2e-146 520.8 354 74.9
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 8.2e-146 520.8 370 73.0
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 8.2e-146 520.8 361 72.3
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 2.4e-145 519.2 365 72.1
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 2.7e-144 515.8 364 72.8
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 1.3e-143 513.5 366 69.9
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 1.8e-140 503.1 276 88.4
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 4.4e-139 498.4 359 70.8
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 2.4e-137 492.7 278 87.4
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 1.2e-131 473.8 367 62.7
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 5.7e-131 471.5 284 82.4
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 4.9e-130 468.4 357 65.3
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 8.3e-130 467.6 395 65.3
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 1.8e-129 466.5 366 62.6
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 2.4e-129 466.1 282 80.5
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 3.1e-129 465.7 284 81.3
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 1.2e-128 463.8 366 62.3
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 1.2e-128 463.8 367 62.4
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 8.6e-127 457.6 339 67.6
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 1.5e-126 456.8 367 61.3
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 1.9e-126 456.4 325 71.1
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 4.7e-125 451.8 366 61.2
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 3.0e-124 449.1 377 63.4
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 4.0e-124 448.7 283 79.2
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 5.2e-124 448.4 369 60.7
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.2e-123 447.2 346 69.1
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 7.0e-121 438.0 308 71.8
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 6.6e-119 431.4 372 59.1
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 3.3e-118 429.1 275 76.4
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 1.5e-115 420.2 284 72.9
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 2.1e-112 409.8 277 74.7
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 7.3e-110 401.4 239 83.7
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 1.2e-107 394.0 386 52.3
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 4.3e-102 375.6 275 71.6
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 6.2e-101 371.7 390 50.3
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 6.2e-101 371.7 364 51.9
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 3.2e-97 359.4 368 50.3
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 3.0e-95 352.8 198 85.4
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 9.3e-89 331.3 194 84.5
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 2.4e-81 306.6 273 61.2
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 1.0e-79 301.2 211 71.1
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 6.2e-69 265.4 167 80.2
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 6.2e-69 265.4 177 75.1
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 2.5e-49 200.3 262 48.9
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 4.8e-45 186.0 120 74.2
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 3.1e-44 183.3 148 65.5
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 1.2e-43 181.4 120 72.5
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 1.7e-37 161.0 369 29.8
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 3.7e-37 159.8 115 67.8
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 3.5e-35 153.3 442 26.5
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 1.4e-31 141.4 396 24.7
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 4.1e-28 129.8 113 63.7
DCAR_023404 Daucus carota HOM05D002877 ORTHO05D003248 7.0e-28 129.0 80 77.5
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 1.5e-25 121.3 297 28.3
vmacro06805 Vaccinium macrocarpon HOM05D003727 ORTHO05D426993 3.9e-10 70.1 68 57.4
VMungo0251G3273 Vigna mungo HOM05D003727 ORTHO05D000132 6.6e-10 69.3 48 77.1


User provided reference genes

Program Settings