Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07758 Vaccinium macrocarpon HOM05D006173 ORTHO05D007685 0.0e+00 1154.4 557 100.0
Actinidia17973 Actinidia chinensis HOM05D006173 ORTHO05D007685 2.7e-175 619.4 479 67.2
Hma1.2p1_0044F.1_g026020 Hydrangea macrophylla HOM05D006173 ORTHO05D007685 1.9e-160 570.1 483 61.7
Dinv10196 Davidia involucrata HOM05D006173 ORTHO05D007685 5.9e-154 548.5 484 62.2
Cpa.g.sc33.197 Carica papaya HOM05D006173 ORTHO05D007685 2.2e-153 546.6 480 59.0
Cc06_g22820 Coffea canephora HOM05D006173 ORTHO05D007685 1.1e-152 544.3 487 58.9
Haze_20298 Corylus avellana HOM05D006173 ORTHO05D007685 3.2e-152 542.7 492 59.8
CSS0033436 Camellia sinensis var. sinensis HOM05D006173 ORTHO05D007685 2.7e-151 539.7 507 57.8
Potri.016G030400 Populus trichocarpa HOM05D006173 ORTHO05D007685 7.9e-151 538.1 481 58.2
Ciclev10011725m.g Citrus clementina HOM05D006173 ORTHO05D007685 3.9e-150 535.8 486 58.6
arahy.Tifrunner.gnm1.ann1.TSE1DU Arachis hypogaea HOM05D006173 ORTHO05D007685 8.8e-150 534.6 530 55.5
Oeu060754.2 Olea europaea HOM05D006173 ORTHO05D007685 5.7e-149 531.9 499 55.3
Thecc.05G131000 Theobroma cacao HOM05D006173 ORTHO05D007685 7.4e-149 531.6 486 59.1
Manes.10G077600 Manihot esculenta HOM05D006173 ORTHO05D007685 8.2e-148 528.1 486 58.0
Prupe.7G021600 Prunus persica HOM05D006173 ORTHO05D007685 9.1e-147 524.6 486 59.3
Sabra16G0033900 Salix brachista HOM05D006173 ORTHO05D007685 1.6e-146 523.9 507 54.6
Gohir.A11G305400 Gossypium hirsutum HOM05D006173 ORTHO05D007685 1.0e-145 521.2 488 57.8
Gorai.007G351000 Gossypium raimondii HOM05D006173 ORTHO05D007685 1.7e-145 520.4 488 57.8
MD12G1112000 Malus domestica HOM05D006173 ORTHO05D007685 3.8e-145 519.2 557 53.1
Gohir.D11G320800 Gossypium hirsutum HOM05D006173 ORTHO05D007685 1.1e-144 517.7 488 57.4
Cfa019941 Carpinus fangiana HOM05D006173 ORTHO05D007685 3.2e-144 516.2 486 57.0
Lj1g0020171 Lotus japonicus HOM05D006173 ORTHO05D007685 9.4e-144 514.6 486 56.4
Duzib106G1718 Durio zibethinus HOM05D006173 ORTHO05D007685 1.2e-143 514.2 486 56.8
ClCG10G016510 Citrullus lanatus HOM05D006173 ORTHO05D007685 1.6e-143 513.8 504 56.2
Peaxi162Scf00937g00117 Petunia axillaris HOM05D006173 ORTHO05D007685 1.6e-143 513.8 485 56.7
TWI74G0774 Tripterygium wilfordii HOM05D006173 ORTHO05D007685 2.7e-143 513.1 481 57.0
FAN10G0117 Fragaria x ananassa HOM05D006173 ORTHO05D007685 4.7e-143 512.3 494 56.1
PSO541G4485 Papaver somniferum HOM05D006173 ORTHO05D007685 1.4e-142 510.8 494 55.9
PSO675G1003 Papaver somniferum HOM05D006173 ORTHO05D007685 1.8e-142 510.4 493 56.0
Atru.chr1.1516 Acer truncatum HOM05D006173 ORTHO05D007685 8.8e-142 508.1 491 56.8
RhsimUnG0020600 Rhododendron simsii HOM05D006173 ORTHO05D007685 1.1e-141 507.7 470 60.9
CiPaw.10G124100 Carya illinoinensis HOM05D006173 ORTHO05D007685 2.0e-141 506.9 486 56.8
PGR142G0634 Punica granatum HOM05D006173 ORTHO05D007685 5.7e-141 505.4 486 56.0
arahy.Tifrunner.gnm1.ann1.NS6SL1 Arachis hypogaea HOM05D006173 ORTHO05D007685 8.2e-140 501.5 496 56.0
Aa31LG10G11760 Aethionema arabicum HOM05D006173 ORTHO05D007685 1.4e-139 500.7 531 53.1
A09p49770 Brassica napus HOM05D006173 ORTHO05D007685 3.1e-139 499.6 486 54.7
BraA09t40430Z Brassica rapa HOM05D006173 ORTHO05D007685 3.1e-139 499.6 486 54.7
BolC8t50833H Brassica oleracea HOM05D006173 ORTHO05D007685 7.0e-139 498.4 487 53.2
MSTRG.10773 Avicennia marina HOM05D006173 ORTHO05D007685 1.2e-138 497.7 484 53.5
C08p32150 Brassica napus HOM05D006173 ORTHO05D007685 1.2e-138 497.7 487 53.6
FAN01G1644 Fragaria x ananassa HOM05D006173 ORTHO05D007685 1.2e-138 497.7 562 51.2
EL10Ac3g07343 Beta vulgaris HOM05D006173 ORTHO05D007685 1.6e-138 497.3 486 55.3
BcaC07g40109 Brassica carinata HOM05D006173 ORTHO05D007685 2.7e-138 496.5 486 54.9
Medtr7g088540 Medicago truncatula HOM05D006173 ORTHO05D007685 2.7e-138 496.5 486 54.7
Migut.K00169 Erythranthe guttata HOM05D006173 ORTHO05D007685 4.5e-138 495.7 484 53.5
Glyma.03G120400 Glycine max HOM05D006173 ORTHO05D007685 5.9e-138 495.4 489 55.0
CsaV3_3G039830 Cucumis sativus L. HOM05D006173 ORTHO05D007685 1.7e-137 493.8 486 54.7
Thhalv10005968m.g Eutrema salsugineum HOM05D006173 ORTHO05D007685 3.8e-137 492.7 487 53.8
TAR623G0939 Trochodendron aralioides HOM05D006173 ORTHO05D007685 5.0e-137 492.3 456 59.9
PGSC0003DMG400017881 Solanum tuberosum HOM05D006173 ORTHO05D007685 1.1e-136 491.1 484 53.9
ECA247G0085 Erigeron canadensis HOM05D006173 ORTHO05D007685 1.5e-136 490.7 485 54.8
TPR.G27968 Trifolium pratense HOM05D006173 ORTHO05D007685 1.9e-136 490.3 377 65.0
AUR62020996 Chenopodium quinoa HOM05D006173 ORTHO05D007685 7.2e-136 488.4 489 55.0
Sopen08g011280 Solanum pennellii HOM05D006173 ORTHO05D007685 9.4e-136 488.0 484 53.7
Solyc08g016801.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 1.2e-135 487.6 484 53.7
Phvul.001G116600 Phaseolus vulgaris HOM05D006173 ORTHO05D007685 2.7e-135 486.5 487 54.4
Glyma.19G125000 Glycine max HOM05D006173 ORTHO05D007685 6.1e-135 485.3 488 55.1
BcaC07g40002 Brassica carinata HOM05D006173 ORTHO05D007685 5.2e-134 482.3 487 52.6
Sed0007984 Sechium edule HOM05D006173 ORTHO05D007685 2.0e-133 480.3 486 54.5
Eucgr.K01689 Eucalyptus grandis HOM05D006173 ORTHO05D007685 4.4e-133 479.2 488 53.9
Hund19061 Selenicereus undatus HOM05D006173 ORTHO05D007685 4.4e-133 479.2 486 53.7
SalBow1G0987 Salvia bowleyana HOM05D006173 ORTHO05D007685 2.2e-132 476.9 574 47.6
FvH4_7g04320 Fragaria vesca HOM05D006173 ORTHO05D007685 2.8e-132 476.5 486 53.7
MELO3C009724.2 Cucumis melo HOM05D006173 ORTHO05D007685 8.3e-132 474.9 486 53.9
Aqoxy3G01734 Aquilegia oxysepala HOM05D006173 ORTHO05D007685 1.1e-131 474.6 378 63.2
VMungo0331G1996 Vigna mungo HOM05D006173 ORTHO05D007685 1.8e-131 473.8 486 53.7
THA.LOC104814894 Tarenaya hassleriana HOM05D006173 ORTHO05D007685 3.1e-131 473.0 486 53.5
CARHR167050 Cardamine hirsuta HOM05D006173 ORTHO05D007685 1.6e-130 470.7 486 53.7
Lsat_1_v5_gn_9_32341 Lactuca sativa HOM05D006173 ORTHO05D007685 2.0e-130 470.3 486 53.5
Carub.0005s2364 Capsella rubella HOM05D006173 ORTHO05D007685 8.5e-129 464.9 486 53.3
AT3G56900 Arabidopsis thaliana HOM05D006173 ORTHO05D007685 1.5e-128 464.2 487 53.4
AL5G38300 Arabidopsis lyrata HOM05D006173 ORTHO05D007685 2.5e-128 463.4 487 53.2
Sp5g05690 Schrenkiella parvula HOM05D006173 ORTHO05D007685 9.4e-128 461.5 486 52.7
HanXRQChr14g0457301 Helianthus annuus HOM05D006173 ORTHO05D007685 1.5e-125 454.1 478 52.3
Zm00001eb405260 Zea mays HOM05D006173 ORTHO05D007685 1.7e-124 450.7 491 49.1
Os12g0129400 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 3.7e-124 449.5 490 48.0
SEGI_22413 Sequoiadendron giganteum HOM05D006173 ORTHO05D007685 5.4e-123 445.7 480 50.2
Os11g0132700 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 7.0e-123 445.3 490 47.3
SGA_v2.0_scaffold106G30556 Striga asiatica HOM05D006173 ORTHO05D007685 1.6e-122 444.1 566 44.9
FAN06G1001 Fragaria x ananassa HOM05D006173 ORTHO05D007685 1.9e-120 437.2 486 51.9
AUR62018437 Chenopodium quinoa HOM05D006173 ORTHO05D007685 9.5e-120 434.9 388 59.8
Sc19g0007880 Simmondsia chinensis HOM05D006173 ORTHO05D007685 2.3e-118 430.3 462 52.8
MBI19_g25019_MAGBIO Magnolia biondii HOM05D006173 ORTHO05D007685 1.8e-110 404.1 467 51.4
CDE02G3082 Ceratophyllum demersum HOM05D006173 ORTHO05D007685 6.8e-110 402.1 484 48.1
Psat3g082320 Pisum sativum HOM05D006173 ORTHO05D007685 9.5e-96 355.1 412 50.5
Mapoly0010s0124 Marchantia polymorpha HOM05D006173 ORTHO05D007685 1.8e-94 350.9 367 49.6
SMO116G0186 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 1.5e-93 347.8 369 48.2
SMO133G0039 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 2.0e-93 347.4 369 48.2
Ca_08352_v3 Cicer arietinum L. HOM05D006173 ORTHO05D007685 4.4e-93 346.3 284 61.6
Nitab4.5_0000211g0120 Nicotiana tabacum HOM05D006173 ORTHO05D007685 2.2e-92 344.0 282 62.1
Nitab4.5_0003840g0020 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.5e-88 331.3 300 56.3
GSVIVG01025850001 Vitis vinifera HOM05D006173 ORTHO05D007685 3.6e-87 326.6 197 80.2
MD14G1101100 Malus domestica HOM05D006173 ORTHO05D007685 4.9e-84 316.2 199 76.9
RcHm_v2.0_Chr1g0329271 Rosa chinensis HOM05D006173 ORTHO05D007685 1.3e-81 308.1 196 75.5
Lalb_Chr22g0358001 Lupinus albus HOM05D006173 ORTHO05D007685 3.9e-81 306.6 196 73.5
ATR0307G134 Amborella trichopoda HOM05D006173 ORTHO05D007685 4.8e-79 299.7 197 72.6
Pp3c11_18220 Physcomitrium patens HOM05D006173 ORTHO05D007685 8.1e-79 298.9 478 34.7
QL07p014498 Quercus lobata HOM05D006173 ORTHO05D007685 1.2e-77 295.0 183 77.6
Solyc08g016808.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 2.6e-77 293.9 391 44.0
VMungo1383G1641 Vigna mungo HOM05D006173 ORTHO05D007685 2.6e-77 293.9 457 41.6
Lj1A24G66 Lonicera japonica HOM05D006173 ORTHO05D007685 7.4e-72 275.8 199 70.4
Lj1A24G67 Lonicera japonica HOM05D006173 ORTHO05D007685 2.1e-66 257.7 258 55.8
unitig_46.g18486 Utricularia gibba HOM05D006173 ORTHO05D007685 3.9e-65 253.4 222 56.3
SMO069G0001 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 9.0e-62 242.3 257 48.6
HPP92_002170 Vanilla planifolia HOM05D006173 ORTHO05D007685 3.8e-60 236.9 167 66.5
RcHm_v2.0_Chr1g0329281 Rosa chinensis HOM05D006173 ORTHO05D007685 8.4e-60 235.7 244 52.9
FAN03G1994 Fragaria x ananassa HOM05D006173 ORTHO05D007685 2.5e-56 224.2 252 50.0
MD14G1101000 Malus domestica HOM05D006173 ORTHO05D007685 8.2e-55 219.2 262 48.1
ATR0307G100 Amborella trichopoda HOM05D006173 ORTHO05D007685 2.6e-53 214.2 242 49.2
DCAR_020632 Daucus carota HOM05D002466 ORTHO05D002668 8.5e-52 209.1 132 74.2
Lalb_Chr22g0357991 Lupinus albus HOM05D006173 ORTHO05D007685 8.5e-52 209.1 237 49.4
Solyc08g036600.3 Solanum lycopersicum HOM05D006173 ORTHO05D007685 1.2e-50 205.3 220 50.9
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 1.5e-48 198.4 242 47.1
CANSAT64G0701 Cannabis sativa HOM05D006173 ORTHO05D007685 3.1e-46 190.7 117 76.1
CBR_g54315 Chara braunii HOM05D006173 ORTHO05D007685 9.4e-43 179.1 366 34.2
Lj2A730T36 Lonicera japonica HOM05D006173 ORTHO05D007685 2.8e-39 167.5 258 41.9
QL07p014493 Quercus lobata HOM05D006173 ORTHO05D007685 2.4e-38 164.5 183 48.6
TAR623G0990 Trochodendron aralioides HOM05D006173 ORTHO05D007685 4.1e-38 163.7 97 81.4
GSVIVG01025851001 Vitis vinifera HOM05D006173 ORTHO05D007685 8.5e-36 156.0 176 51.7
Nitab4.5_0000211g0140 Nicotiana tabacum HOM05D006173 ORTHO05D007685 7.0e-30 136.3 77 80.5
SGA_v2.0_scaffold106G30559 Striga asiatica HOM05D000268 ORTHO05D000261 9.1e-30 136.0 307 33.9
PRCOL_00002577 Prasinoderma coloniale HOM05D006173 ORTHO05D007685 1.3e-28 132.1 321 28.0
Nitab4.5_0003840g0030 Nicotiana tabacum HOM05D006173 ORTHO05D007685 8.5e-28 129.4 94 64.9
Nitab4.5_0000275g0010 Nicotiana tabacum HOM05D006173 ORTHO05D007685 3.0e-25 120.9 70 77.1
Lsat_1_v5_gn_4_93961 Lactuca sativa HOM05D006173 ORTHO05D007685 9.8e-16 89.4 51 76.5
Lj2A730T35 Lonicera japonica HOM05D006173 ORTHO05D007685 3.7e-15 87.4 49 83.7


User provided reference genes

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