Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07608 Vaccinium macrocarpon HOM05D030287 ORTHO05D008751 1.6e-152 542.7 278 100.0
vmacro02975 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 1.8e-63 246.9 147 91.2
vmacro19869 Vaccinium macrocarpon HOM05D007616 ORTHO05D008751 6.5e-45 185.3 111 85.6
TPR.G16511 Trifolium pratense HOM05D000158 ORTHO05D000197 1.4e-15 87.8 105 42.9
vmacro05337 Vaccinium macrocarpon HOM05D030287 ORTHO05D018099 1.9e-15 87.4 63 76.2
TPR.G7156 Trifolium pratense HOM05D000158 ORTHO05D000197 2.4e-15 87.0 105 41.9
TPR.G27324 Trifolium pratense HOM05D000158 ORTHO05D000197 5.4e-15 85.9 105 41.9
TPR.G33065 Trifolium pratense HOM05D000158 ORTHO05D000197 7.0e-15 85.5 105 41.9
TPR.G1745 Trifolium pratense HOM05D000158 ORTHO05D000197 9.2e-15 85.1 61 59.0
TPR.G7440 Trifolium pratense HOM05D000158 ORTHO05D000197 9.2e-15 85.1 61 59.0
TPR.G3175 Trifolium pratense HOM05D000158 ORTHO05D000197 6.0e-14 82.4 105 41.0
vmacro10672 Vaccinium macrocarpon HOM05D002447 ORTHO05D001298 1.1e-10 71.6 40 90.0
Rhsim09G0093400 Rhododendron simsii HOM05D002447 ORTHO05D001298 8.9e-10 68.6 40 85.0
TPR.G289 Trifolium pratense HOM05D000158 ORTHO05D000197 7.5e-09 65.5 54 50.0
CANSAT01G0504 Cannabis sativa HOM05D002447 ORTHO05D001298 1.3e-08 64.7 49 65.3
Actinidia36644 Actinidia chinensis HOM05D002447 ORTHO05D001298 1.7e-08 64.3 49 65.3
Oeu059518.1 Olea europaea HOM05D002447 ORTHO05D001298 1.7e-08 64.3 49 65.3
MSTRG.7614 Avicennia marina HOM05D002447 ORTHO05D001298 2.2e-08 63.9 60 56.7
CSS0047079 Camellia sinensis var. sinensis HOM05D000158 ORTHO05D000197 3.7e-08 63.2 63 38.1
Actinidia12376 Actinidia chinensis HOM05D002447 ORTHO05D001298 4.9e-08 62.8 49 63.3
Nitab4.5_0010650g0010 Nicotiana tabacum HOM05D002447 ORTHO05D001298 4.9e-08 62.8 94 43.6
Migut.L00405 Erythranthe guttata HOM05D002447 ORTHO05D001298 8.3e-08 62.0 59 57.6
Eucgr.B02941 Eucalyptus grandis HOM05D002447 ORTHO05D001298 8.3e-08 62.0 52 59.6
Nitab4.5_0000916g0110 Nicotiana tabacum HOM05D002447 ORTHO05D001298 8.3e-08 62.0 94 42.6
Manes.17G080900 Manihot esculenta HOM05D002447 ORTHO05D001298 1.1e-07 61.6 147 36.7
CSS0033219 Camellia sinensis var. sinensis HOM05D002447 ORTHO05D001298 1.4e-07 61.2 40 75.0
Dinv28051 Davidia involucrata HOM05D002447 ORTHO05D001298 1.9e-07 60.8 40 72.5
SGA_v2.0_scaffold59G20702 Striga asiatica HOM05D002447 ORTHO05D001298 2.4e-07 60.5 39 74.4
arahy.Tifrunner.gnm1.ann1.2Z77FC Arachis hypogaea HOM05D002447 ORTHO05D001298 3.2e-07 60.1 40 72.5
arahy.Tifrunner.gnm1.ann1.7X1Y1S Arachis hypogaea HOM05D002447 ORTHO05D001298 3.2e-07 60.1 40 72.5
CSS0002727 Camellia sinensis var. sinensis HOM05D002447 ORTHO05D001298 3.2e-07 60.1 49 61.2
GSVIVG01011701001 Vitis vinifera HOM05D002447 ORTHO05D001298 4.1e-07 59.7 154 34.4
Lsat_1_v5_gn_3_55821 Lactuca sativa HOM05D002447 ORTHO05D001298 7.1e-07 58.9 52 55.8
Manes.15G131700 Manihot esculenta HOM05D002447 ORTHO05D001298 7.1e-07 58.9 40 72.5
TWI74G0359 Tripterygium wilfordii HOM05D002447 ORTHO05D001298 7.1e-07 58.9 48 58.3
Haze_10937 Corylus avellana HOM05D002447 ORTHO05D001298 9.2e-07 58.5 40 70.0
Oeu062633.1 Olea europaea HOM05D002447 ORTHO05D001298 9.2e-07 58.5 92 40.2
Oeu062635.1 Olea europaea HOM05D002447 ORTHO05D001298 9.2e-07 58.5 92 40.2
Cfa014986 Carpinus fangiana HOM05D002447 ORTHO05D001298 1.2e-06 58.2 40 70.0
Ca_17104_v3 Cicer arietinum L. HOM05D002447 ORTHO05D001298 1.2e-06 58.2 152 35.5
Ca_30890_v3 Cicer arietinum L. HOM05D002447 ORTHO05D001298 1.2e-06 58.2 152 35.5
MD17G1258400 Malus domestica HOM05D002447 ORTHO05D001298 1.2e-06 58.2 39 69.2
CSS0028232 Camellia sinensis var. sinensis HOM05D002447 ORTHO05D001298 1.6e-06 57.8 50 64.0
PGR102G2096 Punica granatum HOM05D002447 ORTHO05D001298 1.6e-06 57.8 40 67.5
Manes.02G076600 Manihot esculenta HOM05D002447 ORTHO05D001298 2.1e-06 57.4 84 40.5
TWI77G0347 Tripterygium wilfordii HOM05D002447 ORTHO05D001298 2.1e-06 57.4 48 58.3
Haze_14260 Corylus avellana HOM05D002447 ORTHO05D001298 2.7e-06 57.0 41 63.4
Gohir.A07G078200 Gossypium hirsutum HOM05D002447 ORTHO05D001298 2.7e-06 57.0 48 58.3
Gohir.D07G083000 Gossypium hirsutum HOM05D002447 ORTHO05D001298 2.7e-06 57.0 48 58.3
Gorai.001G088600 Gossypium raimondii HOM05D002447 ORTHO05D001298 2.7e-06 57.0 48 58.3
unitig_746.g26886 Utricularia gibba HOM05D002447 ORTHO05D001298 3.5e-06 56.6 40 67.5
Aqoxy3G00030 Aquilegia oxysepala HOM05D002447 ORTHO05D001298 4.6e-06 56.2 41 61.0
Cpa.g.sc116.54 Carica papaya HOM05D002447 ORTHO05D001298 4.6e-06 56.2 39 66.7
ClCG01G006370 Citrullus lanatus HOM05D002447 ORTHO05D001298 4.6e-06 56.2 40 67.5
Medtr3g065570 Medicago truncatula HOM05D002447 ORTHO05D001298 4.6e-06 56.2 144 35.4
Lsat_1_v5_gn_8_44400 Lactuca sativa HOM05D002447 ORTHO05D001298 6.0e-06 55.8 59 47.5
CiPaw.05G193400 Carya illinoinensis HOM05D002447 ORTHO05D001298 7.8e-06 55.5 40 67.5
FAN09G2477 Fragaria x ananassa HOM05D002447 ORTHO05D001298 7.8e-06 55.5 51 54.9
Psat0s1687g0040 Pisum sativum HOM05D002447 ORTHO05D001298 7.8e-06 55.5 142 33.8
Sed0022114 Sechium edule HOM05D002447 ORTHO05D001298 7.8e-06 55.5 40 65.0
TWI53G0855 Tripterygium wilfordii HOM05D002447 ORTHO05D001298 7.8e-06 55.5 143 35.0
TWI74G0932 Tripterygium wilfordii HOM05D002447 ORTHO05D001298 7.8e-06 55.5 147 33.3


User provided reference genes

Program Settings