Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07304 Vaccinium macrocarpon HOM05D006951 ORTHO05D008594 7.3e-71 270.4 131 100.0
Actinidia26657 Actinidia chinensis HOM05D006951 ORTHO05D008594 4.7e-62 241.1 129 86.8
Actinidia28914 Actinidia chinensis HOM05D006951 ORTHO05D008594 6.2e-62 240.7 131 86.3
Cc06_g04390 Coffea canephora HOM05D006951 ORTHO05D008594 5.2e-61 237.7 129 83.7
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 6.8e-61 237.3 129 84.5
CiPaw.09G171000 Carya illinoinensis HOM05D006951 ORTHO05D008594 1.7e-59 232.6 131 81.7
Haze_20517 Corylus avellana HOM05D006951 ORTHO05D008594 1.7e-59 232.6 130 80.8
TAR369G1149 Trochodendron aralioides HOM05D006951 ORTHO05D008594 2.2e-59 232.3 131 80.9
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 4.9e-59 231.1 130 80.0
Sabra06G0096900 Salix brachista HOM05D006951 ORTHO05D008594 8.3e-59 230.3 131 81.7
Eucgr.A01658 Eucalyptus grandis HOM05D006951 ORTHO05D008594 1.9e-58 229.2 131 81.7
Atru.chr8.1776 Acer truncatum HOM05D006951 ORTHO05D008594 4.1e-58 228.0 130 80.8
Solyc01g097140.4 Solanum lycopersicum HOM05D006951 ORTHO05D008594 5.4e-58 227.6 129 80.6
Sopen01g040820 Solanum pennellii HOM05D006951 ORTHO05D008594 5.4e-58 227.6 129 80.6
PGSC0003DMG400027515 Solanum tuberosum HOM05D006951 ORTHO05D008594 7.1e-58 227.3 129 80.6
Nitab4.5_0024714g0010 Nicotiana tabacum HOM05D006951 ORTHO05D008594 9.2e-58 226.9 128 81.2
Nitab4.5_0002247g0030 Nicotiana tabacum HOM05D006951 ORTHO05D008594 1.2e-57 226.5 128 80.5
Thecc.05G069400 Theobroma cacao HOM05D006951 ORTHO05D008594 1.2e-57 226.5 131 77.9
CANSAT80G0954 Cannabis sativa HOM05D006951 ORTHO05D008594 2.7e-57 225.3 130 78.5
Glyma.19G185200 Glycine max HOM05D006951 ORTHO05D008594 2.7e-57 225.3 127 82.7
Potri.006G122700 Populus trichocarpa HOM05D006951 ORTHO05D008594 2.7e-57 225.3 130 80.0
TAR633G0596 Trochodendron aralioides HOM05D006951 ORTHO05D008594 2.7e-57 225.3 131 78.6
Cpa.g.sc456.2 Carica papaya HOM05D006951 ORTHO05D008594 3.5e-57 224.9 132 80.3
Duzib106G1710 Durio zibethinus HOM05D006951 ORTHO05D008594 3.5e-57 224.9 130 79.2
Gohir.D09G141300 Gossypium hirsutum HOM05D006951 ORTHO05D008594 3.5e-57 224.9 131 80.2
Gorai.006G162200 Gossypium raimondii HOM05D006951 ORTHO05D008594 3.5e-57 224.9 131 80.2
Hma1.2p1_0828F.1_g225170 Hydrangea macrophylla HOM05D006951 ORTHO05D008594 3.5e-57 224.9 132 82.6
COL.COLO4_26935 Corchorus olitorius HOM05D006951 ORTHO05D008594 4.6e-57 224.6 131 80.2
AUR62042061 Chenopodium quinoa HOM05D006951 ORTHO05D008594 7.8e-57 223.8 126 81.0
Peaxi162Scf00282g00715 Petunia axillaris HOM05D006951 ORTHO05D008594 7.8e-57 223.8 129 79.1
THA.LOC104816356 Tarenaya hassleriana HOM05D006951 ORTHO05D008594 7.8e-57 223.8 131 77.9
AUR62026921 Chenopodium quinoa HOM05D006951 ORTHO05D008594 1.0e-56 223.4 126 81.0
TWI74G0247 Tripterygium wilfordii HOM05D006951 ORTHO05D008594 3.0e-56 221.9 131 77.9
Gohir.A09G145200 Gossypium hirsutum HOM05D006951 ORTHO05D008594 3.9e-56 221.5 131 79.4
VMungo1383G2370 Vigna mungo HOM05D006951 ORTHO05D008594 5.1e-56 221.1 127 79.5
CAN.G134.74 Capsicum annuum HOM05D006951 ORTHO05D008594 8.6e-56 220.3 129 77.5
ECA233G5925 Erigeron canadensis HOM05D006951 ORTHO05D008594 8.6e-56 220.3 127 78.7
PSO339G4731 Papaver somniferum HOM05D006951 ORTHO05D008594 8.6e-56 220.3 131 76.3
EL10Ac7g16659 Beta vulgaris HOM05D006951 ORTHO05D008594 1.1e-55 219.9 126 79.4
Phvul.001G180100 Phaseolus vulgaris HOM05D006951 ORTHO05D008594 1.1e-55 219.9 127 78.7
GSVIVG01033661001 Vitis vinifera HOM05D006951 ORTHO05D008594 1.1e-55 219.9 130 80.8
MSTRG.10329 Avicennia marina HOM05D006951 ORTHO05D008594 1.5e-55 219.5 127 81.1
ClCG04G009460 Citrullus lanatus HOM05D006951 ORTHO05D008594 1.9e-55 219.2 126 77.8
Manes.16G055400 Manihot esculenta HOM05D006951 ORTHO05D008594 1.9e-55 219.2 129 77.5
PSO801G0767 Papaver somniferum HOM05D006951 ORTHO05D008594 5.6e-55 217.6 131 75.6
QL07p042869 Quercus lobata HOM05D006951 ORTHO05D008594 5.6e-55 217.6 166 65.7
SalBow5G4485 Salvia bowleyana HOM05D006951 ORTHO05D008594 1.6e-54 216.1 129 75.2
DCAR_017669 Daucus carota HOM05D006951 ORTHO05D008594 2.1e-54 215.7 130 71.5
FAN05G0469 Fragaria x ananassa HOM05D006951 ORTHO05D008594 2.8e-54 215.3 130 76.2
Nitab4.5_0009274g0040 Nicotiana tabacum HOM05D006951 ORTHO05D008594 2.8e-54 215.3 121 82.6
PGR004G1868 Punica granatum HOM05D006951 ORTHO05D008594 2.8e-54 215.3 125 76.0
CsaV3_6G040080 Cucumis sativus L. HOM05D006951 ORTHO05D008594 3.6e-54 214.9 126 77.0
FAN05G0824 Fragaria x ananassa HOM05D006951 ORTHO05D008594 6.2e-54 214.2 130 75.4
Aa31LG1G21700 Aethionema arabicum HOM05D006951 ORTHO05D008594 8.1e-54 213.8 128 75.8
AL6G12830 Arabidopsis lyrata HOM05D006951 ORTHO05D008594 8.1e-54 213.8 131 74.0
Carub.0006s0227 Capsella rubella HOM05D006951 ORTHO05D008594 8.1e-54 213.8 131 74.0
Medtr7g102310 Medicago truncatula HOM05D006951 ORTHO05D008594 8.1e-54 213.8 128 76.6
Nn6g35256 Nelumbo nucifera HOM05D006951 ORTHO05D008594 8.1e-54 213.8 130 74.6
MELO3C024481.2 Cucumis melo HOM05D006951 ORTHO05D008594 1.1e-53 213.4 126 75.4
FAN14G1959 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.1e-53 213.4 130 75.4
Sp6g39280 Schrenkiella parvula HOM05D006951 ORTHO05D008594 1.4e-53 213.0 131 74.0
CARHR209870 Cardamine hirsuta HOM05D006951 ORTHO05D008594 1.8e-53 212.6 131 74.0
Thhalv10014956m.g Eutrema salsugineum HOM05D006951 ORTHO05D008594 1.8e-53 212.6 131 73.3
SalBow5G4376 Salvia bowleyana HOM05D006951 ORTHO05D008594 1.8e-53 212.6 129 74.4
FAN02G4365 Fragaria x ananassa HOM05D006951 ORTHO05D008594 5.2e-53 211.1 130 74.6
Aqoxy2G01713 Aquilegia oxysepala HOM05D006951 ORTHO05D008594 6.8e-53 210.7 126 75.4
MBI07_g19430_MAGBIO Magnolia biondii HOM05D006951 ORTHO05D008594 6.8e-53 210.7 126 74.6
FvH4_6g16580 Fragaria vesca HOM05D006951 ORTHO05D008594 1.2e-52 209.9 130 74.6
Prupe.7G127500 Prunus persica HOM05D006951 ORTHO05D008594 1.5e-52 209.5 129 72.1
RcHm_v2.0_Chr3g0470511 Rosa chinensis HOM05D006951 ORTHO05D008594 1.5e-52 209.5 128 75.0
Ciclev10013072m.g Citrus clementina HOM05D006951 ORTHO05D008594 2.0e-52 209.1 124 76.6
MD12G1109000 Malus domestica HOM05D006951 ORTHO05D008594 2.0e-52 209.1 129 72.9
Sed0009232 Sechium edule HOM05D006951 ORTHO05D008594 2.0e-52 209.1 127 76.4
arahy.Tifrunner.gnm1.ann1.GEWQ29 Arachis hypogaea HOM05D006951 ORTHO05D008594 3.4e-52 208.4 130 72.3
arahy.Tifrunner.gnm1.ann1.U3DP0D Arachis hypogaea HOM05D006951 ORTHO05D008594 3.4e-52 208.4 130 72.3
Lj1g0019165 Lotus japonicus HOM05D006951 ORTHO05D008594 4.4e-52 208.0 126 77.0
BcaB01g05838 Brassica carinata HOM05D006951 ORTHO05D008594 5.8e-52 207.6 127 72.4
A03p01180 Brassica napus HOM05D006951 ORTHO05D008594 5.8e-52 207.6 127 72.4
C03p01520 Brassica napus HOM05D006951 ORTHO05D008594 5.8e-52 207.6 127 72.4
BolC3t12706H Brassica oleracea HOM05D006951 ORTHO05D008594 5.8e-52 207.6 127 72.4
BraA03t09500Z Brassica rapa HOM05D006951 ORTHO05D008594 5.8e-52 207.6 127 72.4
HanXRQChr02g0051701 Helianthus annuus HOM05D006951 ORTHO05D008594 5.8e-52 207.6 129 75.2
SGA_v2.0_scaffold35G14116 Striga asiatica HOM05D006951 ORTHO05D008594 9.9e-52 206.8 127 74.8
Migut.L01713 Erythranthe guttata HOM05D006951 ORTHO05D008594 1.7e-51 206.1 130 74.6
BcaB01g05820 Brassica carinata HOM05D006951 ORTHO05D008594 2.9e-51 205.3 127 71.7
HanXRQChr13g0400861 Helianthus annuus HOM05D006951 ORTHO05D008594 2.9e-51 205.3 129 72.1
Ca_08913_v3 Cicer arietinum L. HOM05D006951 ORTHO05D008594 3.7e-51 204.9 124 74.2
Psat3g041600 Pisum sativum HOM05D006951 ORTHO05D008594 6.4e-51 204.1 126 75.4
Lalb_Chr25g0288931 Lupinus albus HOM05D006951 ORTHO05D008594 1.1e-50 203.4 126 69.8
CDE08G0062 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 7.8e-49 197.2 126 68.3
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 8.6e-48 193.7 113 78.8
Lsat_1_v5_gn_6_24461 Lactuca sativa HOM05D006951 ORTHO05D008594 2.5e-47 192.2 113 78.8
ATR0723G063 Amborella trichopoda HOM05D006951 ORTHO05D008594 3.6e-46 188.3 126 65.9
Os03g0108000 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 2.4e-45 185.7 127 64.6
CDE02G4226 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 4.0e-45 184.9 126 67.5
Zm00001eb394010 Zea mays HOM05D006951 ORTHO05D008594 5.2e-45 184.5 132 62.9
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 4.9e-43 177.9 116 69.0
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 5.4e-42 174.5 131 58.0
SEGI_23238 Sequoiadendron giganteum HOM05D006951 ORTHO05D008594 8.7e-40 167.2 126 57.1
Dinv35800 Davidia involucrata HOM05D006951 ORTHO05D008594 1.4e-37 159.8 110 71.8
Pp3c1_27510 Physcomitrium patens HOM05D006951 ORTHO05D008594 1.1e-34 150.2 128 51.6
AagrBONN_evm.TU.Sc2ySwM_368.1351 Anthoceros agrestis HOM05D006951 ORTHO05D008594 2.5e-31 139.0 129 50.4
Mapoly0029s0104 Marchantia polymorpha HOM05D006951 ORTHO05D008594 3.3e-31 138.7 107 59.8
AagrBONN_evm.TU.Sc2ySwM_340.899 Anthoceros agrestis HOM05D006951 ORTHO05D008594 5.6e-31 137.9 130 51.5
CSS0013835 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 1.3e-30 136.7 80 83.8
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 3.1e-29 132.1 157 44.6
SMO118G0389 Selaginella moellendorffii HOM05D006951 ORTHO05D008594 2.0e-28 129.4 123 48.8
TPR.G32820 Trifolium pratense HOM05D006951 ORTHO05D008594 5.5e-26 121.3 81 75.3
CSS0008283 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 4.6e-25 118.2 57 91.2
AT5G03455 Arabidopsis thaliana HOM05D006951 ORTHO05D008594 1.3e-24 116.7 75 73.3
TPR.G15158 Trifolium pratense HOM05D006951 ORTHO05D008594 1.7e-19 99.8 67 64.2
Atru.chr8.1773 Acer truncatum HOM05D006951 ORTHO05D008594 6.5e-19 97.8 57 73.7
PGR004G2181 Punica granatum HOM05D006951 ORTHO05D008594 8.4e-19 97.4 63 69.8
Os10g0545700 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 1.1e-18 97.1 54 72.2
BcaC06g32064 Brassica carinata HOM05D006951 ORTHO05D008594 2.5e-18 95.9 57 70.2
Hund14405 Selenicereus undatus HOM05D004066 ORTHO05D004434 7.9e-09 64.3 43 65.1
Hund00749 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.8e-08 63.2 43 62.8
Cre07.g352550 Chlamydomonas reinhardtii HOM05D027504 ORTHO05D028778 4.8e-06 55.1 109 31.2
Haze_20905 Corylus avellana HOM05D006951 ORTHO05D008594 6.3e-06 54.7 36 72.2


User provided reference genes

Program Settings