Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07176 Vaccinium macrocarpon HOM05D001283 ORTHO05D001109 3.6e-76 288.5 184 100.0
CSS0043084 Camellia sinensis var. sinensis HOM05D001283 ORTHO05D001109 2.5e-40 169.5 272 53.7
Duzib114G0871 Durio zibethinus HOM05D001283 ORTHO05D001109 5.3e-35 151.8 276 43.8
Cfa001468 Carpinus fangiana HOM05D001283 ORTHO05D001109 3.4e-34 149.1 285 48.8
Potri.010G203200 Populus trichocarpa HOM05D001283 ORTHO05D001109 3.4e-34 149.1 271 42.1
Hma1.2p1_0953F.1_g241130 Hydrangea macrophylla HOM05D001283 ORTHO05D001109 7.6e-34 147.9 285 44.2
MELO3C023845.2 Cucumis melo HOM05D001283 ORTHO05D001109 1.3e-33 147.1 276 49.6
QL08p059648 Quercus lobata HOM05D001283 ORTHO05D001109 1.7e-33 146.7 281 48.4
Atru.chr12.439 Acer truncatum HOM05D001283 ORTHO05D001109 6.5e-33 144.8 279 42.7
Nn2g11117 Nelumbo nucifera HOM05D001283 ORTHO05D001109 6.5e-33 144.8 269 48.3
Nn2g13353 Nelumbo nucifera HOM05D001283 ORTHO05D001109 1.3e-30 137.1 266 42.1
ClCG07G003240 Citrullus lanatus HOM05D001283 ORTHO05D001109 2.3e-30 136.3 280 46.8
TAR369G1016 Trochodendron aralioides HOM05D001283 ORTHO05D001109 5.1e-30 135.2 275 46.9
TWI63G0311 Tripterygium wilfordii HOM05D001283 ORTHO05D001109 8.7e-30 134.4 274 49.3
Sed0013318 Sechium edule HOM05D001283 ORTHO05D001109 6.3e-28 128.3 285 47.0
TAR633G1370 Trochodendron aralioides HOM05D001283 ORTHO05D001109 1.1e-27 127.5 273 46.5
Ciclev10032342m.g Citrus clementina HOM05D001283 ORTHO05D001109 1.4e-27 127.1 279 39.4
Rhsim09G0166300 Rhododendron simsii HOM05D001283 ORTHO05D001109 6.9e-27 124.8 270 43.0
TAR636G1482 Trochodendron aralioides HOM05D001283 ORTHO05D001109 2.0e-26 123.2 275 40.7
Gohir.D06G172700 Gossypium hirsutum HOM05D001283 ORTHO05D001109 1.1e-24 117.5 287 39.0
Gorai.010G201600 Gossypium raimondii HOM05D001283 ORTHO05D001109 1.1e-24 117.5 287 39.0
Manes.10G029600 Manihot esculenta HOM05D001283 ORTHO05D001109 1.9e-24 116.7 246 47.2
Cc02_g07770 Coffea canephora HOM05D001283 ORTHO05D001109 5.5e-24 115.2 270 46.3
DCAR_011710 Daucus carota HOM05D001283 ORTHO05D001109 9.4e-24 114.4 248 49.6
FAN10G1208 Fragaria x ananassa HOM05D001719 ORTHO05D007646 1.6e-23 113.6 283 40.3
COL.COLO4_15056 Corchorus olitorius HOM05D001719 ORTHO05D007646 1.0e-22 110.9 283 41.3
CsaV3_5G007990 Cucumis sativus L. HOM05D001283 ORTHO05D001109 1.8e-22 110.2 140 67.9
Thecc.10G040700 Theobroma cacao HOM05D001283 ORTHO05D001109 1.1e-21 107.5 234 38.0
Potri.008G056600 Populus trichocarpa HOM05D001283 ORTHO05D001109 1.5e-21 107.1 271 42.1
FAN03G1719 Fragaria x ananassa HOM05D001719 ORTHO05D007646 7.4e-21 104.8 284 40.8
Gohir.A06G167300 Gossypium hirsutum HOM05D001283 ORTHO05D001109 1.7e-20 103.6 274 38.0
Gohir.D10G229500 Gossypium hirsutum HOM05D001283 ORTHO05D001109 1.7e-20 103.6 279 39.4
Lj1A939G60 Lonicera japonica HOM05D001283 ORTHO05D001109 1.7e-20 103.6 244 49.2
RcHm_v2.0_Chr1g0367721 Rosa chinensis HOM05D001283 ORTHO05D001109 4.5e-18 95.5 283 44.2
THA.LOC104807945 Tarenaya hassleriana HOM05D001283 ORTHO05D001109 5.9e-18 95.1 273 44.7
Prupe.2G236400 Prunus persica HOM05D001283 ORTHO05D001109 7.7e-18 94.7 139 63.3
Gorai.011G262000 Gossypium raimondii HOM05D001283 ORTHO05D001109 1.3e-17 94.0 279 35.8
Psat2g041600 Pisum sativum HOM05D001283 ORTHO05D001109 2.5e-16 89.7 285 40.4
GSVIVG01016562001 Vitis vinifera HOM05D001283 ORTHO05D001109 4.2e-16 89.0 272 35.7
FvH4_7g22602 Fragaria vesca HOM05D001283 ORTHO05D001109 5.5e-16 88.6 147 53.7
TWI38G1186 Tripterygium wilfordii HOM05D001283 ORTHO05D001109 1.2e-15 87.4 131 51.1
Aqoxy2G02150 Aquilegia oxysepala HOM05D001283 ORTHO05D001109 2.7e-15 86.3 277 36.8
CiPaw.01G288100 Carya illinoinensis HOM05D001283 ORTHO05D001109 3.6e-15 85.9 272 34.6
Cpa.g.sc1.413 Carica papaya HOM05D001283 ORTHO05D001109 7.9e-15 84.7 277 34.7
Glyma.14G068500 Glycine max HOM05D001283 ORTHO05D001109 7.9e-15 84.7 273 34.8
Phvul.008G232900 Phaseolus vulgaris HOM05D001283 ORTHO05D001109 1.8e-14 83.6 269 38.3
Rhsim03G0130000 Rhododendron simsii HOM05D001283 ORTHO05D001109 3.9e-14 82.4 49 95.9
RhsimUnG0042200 Rhododendron simsii HOM05D001283 ORTHO05D001109 3.9e-14 82.4 49 95.9
THA.LOC104810033 Tarenaya hassleriana HOM05D001283 ORTHO05D001109 3.9e-14 82.4 263 43.0
LjContig00141g0012425 Lotus japonicus HOM05D001283 ORTHO05D001109 5.1e-14 82.0 283 40.3
Thhalv10010627m.g Eutrema salsugineum HOM05D001283 ORTHO05D001109 6.7e-14 81.6 275 43.3
MD07G1199700 Malus domestica HOM05D001283 ORTHO05D001109 8.8e-14 81.3 136 57.4
Hund13768 Selenicereus undatus HOM05D001283 ORTHO05D001109 1.5e-13 80.5 285 33.0
MD01G1135000 Malus domestica HOM05D001283 ORTHO05D001109 3.3e-13 79.3 138 58.0
vmacro10229 Vaccinium macrocarpon HOM05D001283 ORTHO05D426466 3.3e-13 79.3 155 41.9
arahy.Tifrunner.gnm1.ann1.4LB3M6 Arachis hypogaea HOM05D001283 ORTHO05D001109 4.4e-13 79.0 285 33.7
arahy.Tifrunner.gnm1.ann1.J65KEH Arachis hypogaea HOM05D001283 ORTHO05D001109 9.7e-13 77.8 286 33.6
EL10Ac2g04740 Beta vulgaris HOM05D001283 ORTHO05D001109 1.3e-12 77.4 285 31.9
PSO339G6098 Papaver somniferum HOM05D001283 ORTHO05D001109 3.7e-12 75.9 289 38.8
MBI05_g22024_MAGBIO Magnolia biondii HOM05D001283 ORTHO05D001109 6.3e-12 75.1 57 80.7
CiPaw.02G184600 Carya illinoinensis HOM05D001283 ORTHO05D001109 1.4e-11 73.9 55 70.9
CSS0030335 Camellia sinensis var. sinensis HOM05D001283 ORTHO05D001109 2.4e-11 73.2 95 53.7
Lj8C83T18 Lonicera japonica HOM05D001283 ORTHO05D001109 3.1e-11 72.8 140 50.7
Glyma.02G247800 Glycine max HOM05D001283 ORTHO05D001109 5.3e-11 72.0 138 42.8
AUR62039371 Chenopodium quinoa HOM05D001283 ORTHO05D001109 7.0e-11 71.6 266 32.3
TPR.G3508 Trifolium pratense HOM05D001283 ORTHO05D001109 9.1e-11 71.2 297 40.7
Medtr5g079870 Medicago truncatula HOM05D001283 ORTHO05D001109 1.2e-10 70.9 149 53.7
AUR62012095 Chenopodium quinoa HOM05D001283 ORTHO05D001109 1.6e-10 70.5 279 32.3
Sp5g07010 Schrenkiella parvula HOM05D001283 ORTHO05D001109 2.0e-10 70.1 278 39.6
BcaB01g00098 Brassica carinata HOM05D001283 ORTHO05D001109 2.6e-10 69.7 277 39.7
AL5G36610 Arabidopsis lyrata HOM05D001283 ORTHO05D001109 3.5e-10 69.3 283 41.0
CANSAT56G3091 Cannabis sativa HOM05D001283 ORTHO05D001109 4.5e-10 68.9 232 38.8
Haze_17074 Corylus avellana HOM05D001283 ORTHO05D001109 7.7e-10 68.2 70 64.3
Carub.0005s2218 Capsella rubella HOM05D001283 ORTHO05D001109 1.7e-09 67.0 278 41.0
Cfa001184 Carpinus fangiana HOM05D001283 ORTHO05D001109 1.7e-09 67.0 54 72.2
VMungo0647G0607 Vigna mungo HOM05D001283 ORTHO05D001109 2.2e-09 66.6 138 44.9
Eucgr.J00004 Eucalyptus grandis HOM05D001283 ORTHO05D001109 2.9e-09 66.2 60 56.7
Gohir.A10G220000 Gossypium hirsutum HOM05D001283 ORTHO05D001109 3.8e-09 65.9 59 72.9
CANSAT56G4008 Cannabis sativa HOM05D001283 ORTHO05D001109 6.5e-09 65.1 130 53.1
Aa31LG10G10500 Aethionema arabicum HOM05D001283 ORTHO05D001109 8.5e-09 64.7 284 38.4
PSO151G0147 Papaver somniferum HOM05D001283 ORTHO05D001109 1.5e-08 63.9 295 34.2
Ca_05894_v3 Cicer arietinum L. HOM05D001283 ORTHO05D001109 1.2e-07 60.8 284 40.1
PGR044G0210 Punica granatum HOM05D001283 ORTHO05D001109 1.6e-07 60.5 243 31.7
AT3G55460 Arabidopsis thaliana HOM05D001283 ORTHO05D001109 2.1e-07 60.1 268 32.5
Zm00001eb164590 Zea mays HOM05D001283 ORTHO05D001109 3.6e-07 59.3 264 39.4
CARHR165480 Cardamine hirsuta HOM05D001283 ORTHO05D001109 6.1e-07 58.5 265 33.6
FvH4_7g22601 Fragaria vesca HOM05D001283 ORTHO05D001109 8.0e-07 58.2 50 74.0
CDE08G0431 Ceratophyllum demersum HOM05D000046 ORTHO05D000667 1.0e-06 57.8 291 39.2
Lalb_Chr17g0346201 Lupinus albus HOM05D001283 ORTHO05D001109 1.8e-06 57.0 299 34.4
HanXRQChr07g0201281 Helianthus annuus HOM05D001283 ORTHO05D001109 4.0e-06 55.8 255 30.2
BraA04t16158Z Brassica rapa HOM05D001283 ORTHO05D001109 5.2e-06 55.5 280 38.9
ECA238G1861 Erigeron canadensis HOM05D001158 ORTHO05D000964 8.8e-06 54.7 47 68.1


User provided reference genes

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