Gene: CsaV3_5G007990

General Information

Structural Information

  • Species Cucumis sativus L.
  • Gene Identifier CsaV3_5G007990
  • Transcript Identifier CsaV3_5G007990.1
  • Gene Type Coding gene
  • Location chr5 : 4739944-4744305 : negative

Gene Family Information

  • ID HOM05D001283
  • #Genes/#Species 488/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid CsaV3_5G007990.1

Descriptions

  • Description Serine/arginine-rich SC35-like splicing factor
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT3G55460
GO:0000398
ISO
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT3G55460

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT3G55460
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G55460
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G55460

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT3G55460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
Mapman id Description
16.2.6.2 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (SCL28/30/33)