Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07051 Vaccinium macrocarpon HOM05D006605 ORTHO05D008277 4.1e-159 565.1 372 100.0
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 8.0e-14 82.4 38 97.4
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 1.0e-13 82.0 38 94.7
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 1.0e-13 82.0 38 94.7
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 1.0e-13 82.0 38 94.7
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 1.8e-13 81.3 38 94.7
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 2.3e-13 80.9 38 94.7
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 3.0e-13 80.5 38 92.1
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 3.0e-13 80.5 38 92.1
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 3.0e-13 80.5 38 92.1
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 3.0e-13 80.5 38 92.1
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 3.0e-13 80.5 38 92.1
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 3.0e-13 80.5 38 92.1
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 4.0e-13 80.1 38 92.1
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 4.0e-13 80.1 38 94.7
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 6.7e-13 79.3 38 94.7
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 6.7e-13 79.3 38 94.7
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 6.7e-13 79.3 38 92.1
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 6.7e-13 79.3 38 94.7
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 8.8e-13 79.0 38 89.5
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 8.8e-13 79.0 38 89.5
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 8.8e-13 79.0 38 89.5
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 8.8e-13 79.0 38 89.5
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 8.8e-13 79.0 38 92.1
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 8.8e-13 79.0 38 89.5
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 8.8e-13 79.0 38 89.5
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 8.8e-13 79.0 38 89.5
Cpa.g.sc19.283 Carica papaya HOM05D006605 ORTHO05D008277 1.2e-12 78.6 38 89.5
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 1.2e-12 78.6 38 89.5
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 1.5e-12 78.2 38 92.1
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 1.5e-12 78.2 38 86.8
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 2.0e-12 77.8 38 92.1
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 2.0e-12 77.8 38 92.1
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 2.0e-12 77.8 38 92.1
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 2.0e-12 77.8 38 92.1
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 2.0e-12 77.8 38 92.1
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 2.0e-12 77.8 38 89.5
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 2.6e-12 77.4 65 58.5
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 2.6e-12 77.4 36 91.7
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 3.3e-12 77.0 38 92.1
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 3.3e-12 77.0 38 86.8
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 3.3e-12 77.0 38 86.8
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 3.3e-12 77.0 38 86.8
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 3.3e-12 77.0 38 86.8
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 4.4e-12 76.6 38 86.8
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 4.4e-12 76.6 38 86.8
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 4.4e-12 76.6 38 89.5
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 4.4e-12 76.6 38 89.5
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 4.4e-12 76.6 38 89.5
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 4.4e-12 76.6 38 89.5
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 5.7e-12 76.3 38 89.5
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 5.7e-12 76.3 38 89.5
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 7.5e-12 75.9 38 86.8
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 7.5e-12 75.9 38 89.5
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 9.7e-12 75.5 38 84.2
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 9.7e-12 75.5 38 92.1
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 9.7e-12 75.5 38 92.1
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 9.7e-12 75.5 38 92.1
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 9.7e-12 75.5 65 56.9
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 1.3e-11 75.1 38 92.1
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 1.3e-11 75.1 38 86.8
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 1.7e-11 74.7 39 92.3
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 1.7e-11 74.7 38 84.2
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 1.7e-11 74.7 38 86.8
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 1.7e-11 74.7 38 89.5
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 2.2e-11 74.3 36 88.9
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 2.8e-11 73.9 35 91.4
SEGI_08946 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 2.8e-11 73.9 63 58.7
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 3.7e-11 73.6 36 86.1
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 3.7e-11 73.6 38 84.2
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 4.8e-11 73.2 37 86.5
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 4.8e-11 73.2 38 84.2
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 4.8e-11 73.2 38 84.2
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 6.3e-11 72.8 38 84.2
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 8.2e-11 72.4 38 84.2
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 8.2e-11 72.4 36 88.9
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 8.2e-11 72.4 38 86.8
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 1.1e-10 72.0 38 81.6
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 1.4e-10 71.6 38 81.6
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 1.8e-10 71.2 38 81.6
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 3.1e-10 70.5 35 91.4
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 3.1e-10 70.5 38 81.6
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 3.1e-10 70.5 38 81.6
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 7.0e-10 69.3 38 84.2
Dinv06756 Davidia involucrata HOM05D006605 ORTHO05D008277 1.2e-09 68.6 59 57.6
SGA_v2.0_scaffold389G50578 Striga asiatica HOM05D006605 ORTHO05D008277 2.0e-09 67.8 35 82.9
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 3.5e-09 67.0 38 76.3
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 3.5e-09 67.0 38 78.9
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 3.5e-09 67.0 38 78.9
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 1.0e-08 65.5 38 73.7
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 1.7e-08 64.7 35 80.0
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 2.2e-08 64.3 37 75.7
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 8.5e-08 62.4 38 68.4
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 1.1e-07 62.0 38 73.7
Oeu031356.1 Olea europaea HOM05D006605 ORTHO05D008277 5.5e-07 59.7 37 73.0
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 9.4e-07 58.9 30 83.3
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 2.7e-06 57.4 27 96.3
Atru.BG.275.p Acer truncatum HOM05D006605 ORTHO05D008277 6.1e-06 56.2 27 92.6
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 6.1e-06 56.2 27 92.6
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 6.1e-06 56.2 27 92.6
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 8.0e-06 55.8 27 92.6
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 8.0e-06 55.8 27 96.3
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 8.0e-06 55.8 27 96.3


User provided reference genes

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