Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 9.5e-207 723.4 369 100.0
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 3.5e-161 572.0 390 76.9
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 1.1e-149 533.9 388 75.3
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 4.7e-145 518.5 401 69.1
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 7.4e-143 511.1 392 70.7
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 3.5e-140 502.3 394 68.0
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 6.1e-137 491.5 398 66.1
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.1e-137 491.5 336 75.3
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 8.0e-137 491.1 395 67.1
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 3.3e-135 485.7 395 63.5
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 3.7e-134 482.3 386 67.6
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.8e-133 479.9 395 62.8
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 2.0e-132 476.5 395 62.8
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 5.9e-132 474.9 312 78.8
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 7.7e-132 474.6 393 65.4
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 1.0e-131 474.2 395 62.8
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 2.9e-131 472.6 397 63.0
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 5.0e-131 471.9 397 63.0
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 1.9e-130 469.9 391 64.2
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 3.2e-130 469.2 392 65.3
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 3.2e-130 469.2 392 65.1
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 4.2e-130 468.8 397 63.5
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 5.5e-130 468.4 392 64.3
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 9.4e-130 467.6 392 65.1
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 1.2e-129 467.2 392 63.8
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 4.7e-129 465.3 393 64.1
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 1.0e-128 464.2 397 63.2
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 1.0e-128 464.2 392 64.3
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 1.4e-128 463.8 392 64.8
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 1.2e-127 460.7 395 64.8
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 2.0e-127 459.9 395 63.8
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 7.5e-127 458.0 395 63.0
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 9.7e-127 457.6 395 63.8
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 2.8e-126 456.1 392 61.0
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 2.8e-126 456.1 396 64.6
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 2.8e-126 456.1 394 61.4
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 3.7e-126 455.7 394 61.2
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 6.3e-126 454.9 336 69.3
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 1.1e-125 454.1 394 62.4
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 1.8e-125 453.4 395 63.8
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 3.1e-125 452.6 395 63.0
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 4.1e-125 452.2 399 61.4
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 9.1e-125 451.1 336 69.3
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 1.2e-124 450.7 395 62.3
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 2.0e-124 449.9 394 60.9
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 4.5e-124 448.7 394 62.9
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 2.2e-123 446.4 399 61.4
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 2.2e-123 446.4 336 68.5
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 3.8e-123 445.7 369 65.6
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 8.5e-123 444.5 394 60.7
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 8.5e-123 444.5 395 63.3
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 1.9e-122 443.4 392 62.5
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 4.2e-122 442.2 395 60.8
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 4.7e-121 438.7 393 62.3
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 6.1e-121 438.3 384 60.2
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 6.1e-121 438.3 395 60.8
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 2.6e-119 433.0 395 61.5
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 3.7e-118 429.1 422 57.1
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.8e-117 426.8 415 58.3
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 2.4e-117 426.4 392 59.4
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 5.4e-117 425.2 374 62.0
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 5.4e-117 425.2 395 60.3
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 9.1e-117 424.5 392 59.9
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 3.5e-116 422.5 392 58.9
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 5.9e-116 421.8 392 58.4
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 2.3e-115 419.9 420 56.2
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 2.9e-115 419.5 373 61.1
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 3.8e-115 419.1 393 60.1
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 5.0e-115 418.7 393 58.8
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 1.8e-112 410.2 393 57.3
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 1.5e-111 407.1 396 56.3
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 4.4e-111 405.6 387 58.9
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 7.5e-111 404.8 368 57.9
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 9.8e-111 404.4 344 64.5
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 9.8e-111 404.4 392 59.9
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 6.3e-110 401.7 392 54.6
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 1.4e-109 400.6 398 57.0
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 4.5e-108 395.6 440 53.9
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 1.3e-107 394.0 334 64.4
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.7e-107 393.7 398 56.8
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 5.0e-107 392.1 397 56.2
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.2e-105 387.5 392 54.8
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 2.1e-105 386.7 345 62.6
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.8e-104 383.6 331 64.4
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 1.5e-103 380.6 409 54.0
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.3e-102 377.5 338 62.7
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.2e-102 376.7 340 62.4
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 6.4e-102 375.2 394 54.1
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 1.4e-101 374.0 351 56.7
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.2e-100 370.9 299 67.6
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.2e-100 370.9 395 53.7
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.0e-99 367.9 299 67.2
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.0e-99 367.9 299 67.2
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.0e-99 367.9 299 67.2
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 1.5e-95 354.0 336 55.4
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 2.4e-93 346.7 326 55.2
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 9.5e-90 334.7 350 55.1
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 4.0e-88 329.3 450 43.6
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 4.9e-86 322.4 286 62.2
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 7.8e-84 315.1 300 61.0
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 1.7e-83 313.9 397 45.1
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 5.6e-82 308.9 344 53.2
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 1.8e-80 303.9 424 43.4
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 1.7e-70 270.8 273 57.1
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 7.9e-68 261.9 204 70.6
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 3.2e-61 240.0 188 67.0
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 3.0e-59 233.4 160 73.1
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 1.6e-52 211.1 516 31.4
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.0e-35 155.2 178 49.4
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 3.0e-27 127.1 209 38.8
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.4e-24 117.5 135 51.1
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 5.0e-22 109.8 123 49.6
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.0e-15 87.8 97 50.5
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 2.2e-14 84.3 81 58.0
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 3.4e-10 70.5 44 79.5
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 5.7e-10 69.7 47 70.2


User provided reference genes

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