Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 3.8e-51 204.5 101 100.0
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 1.6e-30 136.0 102 61.8
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 2.8e-30 135.2 96 64.6
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 2.8e-30 135.2 96 66.7
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 3.7e-30 134.8 92 67.4
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 1.1e-29 133.3 102 63.7
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 1.4e-29 132.9 101 63.4
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 1.8e-29 132.5 92 66.3
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 1.8e-29 132.5 90 68.9
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 2.4e-29 132.1 102 62.7
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 2.4e-29 132.1 92 66.3
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 2.4e-29 132.1 92 66.3
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 3.1e-29 131.7 102 61.8
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 3.1e-29 131.7 102 61.8
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 3.1e-29 131.7 102 62.7
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 5.3e-29 131.0 97 66.0
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 5.3e-29 131.0 92 65.2
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 5.3e-29 131.0 92 65.2
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 5.3e-29 131.0 92 65.2
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 6.9e-29 130.6 97 63.9
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 9.0e-29 130.2 96 63.5
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 9.0e-29 130.2 97 62.9
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 9.0e-29 130.2 97 62.9
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 1.2e-28 129.8 97 63.9
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 1.5e-28 129.4 102 60.8
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 1.5e-28 129.4 93 65.6
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 2.0e-28 129.0 102 59.8
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 3.4e-28 128.3 102 63.7
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 4.5e-28 127.9 97 63.9
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 5.9e-28 127.5 102 61.8
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 7.7e-28 127.1 102 60.8
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 7.7e-28 127.1 97 59.8
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 7.7e-28 127.1 97 59.8
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 7.7e-28 127.1 101 62.4
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 1.3e-27 126.3 102 60.8
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 1.7e-27 125.9 90 63.3
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 1.7e-27 125.9 90 63.3
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 1.7e-27 125.9 102 59.8
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 2.2e-27 125.6 96 61.5
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 2.9e-27 125.2 101 59.4
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 3.8e-27 124.8 102 59.8
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 3.8e-27 124.8 102 59.8
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 3.8e-27 124.8 102 61.8
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 5.0e-27 124.4 102 60.8
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 6.5e-27 124.0 101 58.4
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 6.5e-27 124.0 97 61.9
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 8.5e-27 123.6 93 61.3
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 8.5e-27 123.6 102 61.8
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 8.5e-27 123.6 102 58.8
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 1.1e-26 123.2 102 57.8
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 1.1e-26 123.2 102 59.8
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 1.1e-26 123.2 97 62.9
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 1.4e-26 122.9 102 58.8
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 1.4e-26 122.9 102 57.8
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 1.9e-26 122.5 102 57.8
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 1.9e-26 122.5 96 60.4
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 1.9e-26 122.5 97 59.8
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 2.5e-26 122.1 102 56.9
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 2.5e-26 122.1 97 61.9
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 3.2e-26 121.7 97 60.8
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 3.2e-26 121.7 102 59.8
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 4.2e-26 121.3 102 56.9
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 4.2e-26 121.3 102 57.8
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 5.5e-26 120.9 92 59.8
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 7.2e-26 120.6 92 59.8
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 9.4e-26 120.2 92 59.8
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 1.2e-25 119.8 102 56.9
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 1.6e-25 119.4 100 58.0
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 6.1e-25 117.5 93 59.1
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 6.1e-25 117.5 97 56.7
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 6.1e-25 117.5 93 59.1
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 6.1e-25 117.5 102 55.9
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 7.9e-25 117.1 93 58.1
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 1.4e-24 116.3 93 58.1
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 1.4e-24 116.3 93 58.1
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 1.8e-24 115.9 93 58.1
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 1.8e-24 115.9 93 58.1
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 1.8e-24 115.9 93 58.1
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 1.8e-24 115.9 93 58.1
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 2.3e-24 115.5 101 53.5
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 3.0e-24 115.2 93 57.0
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 6.7e-24 114.0 92 57.6
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 8.8e-24 113.6 92 55.4
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 8.8e-24 113.6 93 55.9
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 2.0e-23 112.5 75 69.3
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 2.5e-23 112.1 92 59.8
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 1.8e-21 105.9 94 56.4
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 3.1e-21 105.1 102 52.0
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 3.1e-21 105.1 83 60.2
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 9.1e-21 103.6 85 58.8
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 9.1e-21 103.6 96 50.0
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 7.7e-20 100.5 96 47.9
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 1.0e-19 100.1 96 47.9
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 5.0e-19 97.8 89 55.1
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 6.5e-19 97.4 89 55.1
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 1.1e-18 96.7 92 54.3
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 1.9e-18 95.9 89 53.9
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 2.7e-09 65.5 57 57.9
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 1.1e-07 60.1 45 60.0
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 8.2e-06 53.9 84 34.5


User provided reference genes

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