Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06300 Vaccinium macrocarpon HOM05D003175 ORTHO05D003591 1.1e-46 189.5 87 100.0
Rhsim03G0087900 Rhododendron simsii HOM05D003175 ORTHO05D003591 2.7e-29 131.7 70 88.6
vmacro23436 Vaccinium macrocarpon HOM05D003175 ORTHO05D003591 1.0e-28 129.8 71 85.9
Actinidia38453 Actinidia chinensis HOM05D003175 ORTHO05D003591 3.9e-28 127.9 71 85.9
CSS0022912 Camellia sinensis var. sinensis HOM05D003175 ORTHO05D003591 1.2e-26 122.9 71 80.3
CSS0031089 Camellia sinensis var. sinensis HOM05D003175 ORTHO05D003591 1.2e-26 122.9 74 77.0
CSS0001019 Camellia sinensis var. sinensis HOM05D003175 ORTHO05D003591 4.7e-26 120.9 74 77.0
Dinv42332 Davidia involucrata HOM05D003175 ORTHO05D003591 8.1e-26 120.2 73 80.8
CSS0031311 Camellia sinensis var. sinensis HOM05D003175 ORTHO05D003591 1.1e-25 119.8 74 75.7
CSS0037416 Camellia sinensis var. sinensis HOM05D003175 ORTHO05D003591 1.8e-25 119.0 74 77.0
Actinidia29908 Actinidia chinensis HOM05D003175 ORTHO05D003591 3.1e-25 118.2 76 76.3
Dinv36778 Davidia involucrata HOM05D003175 ORTHO05D003591 4.4e-24 114.4 72 76.4
Hma1.2p1_1453F.1_g284310 Hydrangea macrophylla HOM05D003175 ORTHO05D003591 5.8e-24 114.0 74 74.3
QL02p062322 Quercus lobata HOM05D003175 ORTHO05D003591 1.7e-23 112.5 74 71.6
Haze_04011 Corylus avellana HOM05D003175 ORTHO05D003591 4.9e-23 110.9 70 74.3
Haze_21391 Corylus avellana HOM05D003175 ORTHO05D003591 4.9e-23 110.9 70 74.3
TAR371G0179 Trochodendron aralioides HOM05D003175 ORTHO05D003591 6.4e-23 110.5 76 68.4
Nn7g37004 Nelumbo nucifera HOM05D003175 ORTHO05D003591 8.3e-23 110.2 74 67.6
Hma1.2p1_1838F.1_g304840 Hydrangea macrophylla HOM05D003175 ORTHO05D003591 4.1e-22 107.8 74 73.0
THA.LOC104811748 Tarenaya hassleriana HOM05D003175 ORTHO05D003591 7.1e-22 107.1 68 72.1
SGA_v2.0_scaffold40G15473 Striga asiatica HOM05D003175 ORTHO05D003591 1.2e-21 106.3 76 68.4
Cfa006747 Carpinus fangiana HOM05D003175 ORTHO05D003591 1.6e-21 105.9 70 72.9
Prupe.7G207200 Prunus persica HOM05D003175 ORTHO05D003591 2.7e-21 105.1 71 67.6
TAR629G2636 Trochodendron aralioides HOM05D003175 ORTHO05D003591 2.7e-21 105.1 74 66.2
CiPaw.08G005200 Carya illinoinensis HOM05D003175 ORTHO05D003591 3.5e-21 104.8 70 70.0
SGA_v2.0_scaffold337G49169 Striga asiatica HOM05D003175 ORTHO05D003591 3.5e-21 104.8 76 67.1
Cpa.g.sc128.7 Carica papaya HOM05D003175 ORTHO05D003591 4.6e-21 104.4 76 68.4
DCAR_003521 Daucus carota HOM05D003175 ORTHO05D003591 6.0e-21 104.0 64 75.0
PSO017G4091 Papaver somniferum HOM05D003175 ORTHO05D003591 6.0e-21 104.0 63 71.4
QL01p015391 Quercus lobata HOM05D003175 ORTHO05D003591 6.0e-21 104.0 69 71.0
GSVIVG01015186001 Vitis vinifera HOM05D003175 ORTHO05D003591 6.0e-21 104.0 74 67.6
MD02G1081900 Malus domestica HOM05D003175 ORTHO05D003591 1.0e-20 103.2 73 68.5
Peaxi162Scf01425g00001 Petunia axillaris HOM05D003175 ORTHO05D003591 1.3e-20 102.8 70 67.1
RcHm_v2.0_Chr2g0093641 Rosa chinensis HOM05D003175 ORTHO05D003591 1.3e-20 102.8 66 72.7
MD15G1209200 Malus domestica HOM05D003175 ORTHO05D003591 1.7e-20 102.4 67 70.1
Oeu011490.1 Olea europaea HOM05D003175 ORTHO05D003591 1.7e-20 102.4 71 71.8
CARHR270680 Cardamine hirsuta HOM05D003175 ORTHO05D003591 2.3e-20 102.1 71 69.0
Ah.03g147100 Amaranthus hybridus HOM05D003175 ORTHO05D003591 3.0e-20 101.7 74 67.6
THA.LOC104813493 Tarenaya hassleriana HOM05D003175 ORTHO05D003591 3.0e-20 101.7 64 73.4
HPP92_004704 Vanilla planifolia HOM05D003175 ORTHO05D003591 3.0e-20 101.7 67 71.6
Aa31LG1G18310 Aethionema arabicum HOM05D003175 ORTHO05D003591 3.9e-20 101.3 68 66.2
DCAR_031336 Daucus carota HOM05D003175 ORTHO05D003591 3.9e-20 101.3 64 73.4
Carub.0008s1742 Capsella rubella HOM05D003175 ORTHO05D003591 5.1e-20 100.9 67 70.1
PGR102G2971 Punica granatum HOM05D003175 ORTHO05D003591 6.6e-20 100.5 73 60.3
Ah.14g083830 Amaranthus hybridus HOM05D003175 ORTHO05D003591 1.1e-19 99.8 58 75.9
ClCG03G015450 Citrullus lanatus HOM05D003175 ORTHO05D003591 1.1e-19 99.8 68 64.7
Nitab4.5_0001586g0160 Nicotiana tabacum HOM05D003175 ORTHO05D003591 1.1e-19 99.8 70 67.1
Sabra04G0148100 Salix brachista HOM05D003175 ORTHO05D003591 1.1e-19 99.8 55 78.2
AT5G56940 Arabidopsis thaliana HOM05D003175 ORTHO05D003591 1.5e-19 99.4 69 69.6
MSTRG.5776 Avicennia marina HOM05D003175 ORTHO05D003591 1.5e-19 99.4 74 66.2
CDE06G2360 Ceratophyllum demersum HOM05D003175 ORTHO05D003591 1.5e-19 99.4 73 64.4
Nitab4.5_0002593g0030 Nicotiana tabacum HOM05D003175 ORTHO05D003591 1.5e-19 99.4 70 67.1
FAN23G2612 Fragaria x ananassa HOM05D003175 ORTHO05D003591 1.9e-19 99.0 66 68.2
FAN26G0002 Fragaria x ananassa HOM05D003175 ORTHO05D003591 1.9e-19 99.0 66 68.2
PSO063G6037 Papaver somniferum HOM05D003175 ORTHO05D003591 1.9e-19 99.0 66 65.2
EL10Ac6g15408 Beta vulgaris HOM05D003175 ORTHO05D003591 2.5e-19 98.6 68 66.2
CDE02G0210 Ceratophyllum demersum HOM05D003175 ORTHO05D003591 2.5e-19 98.6 58 72.4
AUR62017777 Chenopodium quinoa HOM05D003175 ORTHO05D003591 3.3e-19 98.2 74 62.2
CsaV3_1G040590 Cucumis sativus L. HOM05D003175 ORTHO05D003591 3.3e-19 98.2 59 71.2
PSO170G4980 Papaver somniferum HOM05D003175 ORTHO05D003591 3.3e-19 98.2 61 68.9
Potri.004G217400 Populus trichocarpa HOM05D003175 ORTHO05D003591 3.3e-19 98.2 68 63.2
AL52U10030 Arabidopsis lyrata HOM05D001215 ORTHO05D003591 4.3e-19 97.8 69 68.1
AL8G32800 Arabidopsis lyrata HOM05D003175 ORTHO05D003591 4.3e-19 97.8 69 68.1
FAN19G2985 Fragaria x ananassa HOM05D003175 ORTHO05D003591 4.3e-19 97.8 66 66.7
Nitab4.5_0001519g0020 Nicotiana tabacum HOM05D003175 ORTHO05D003591 4.3e-19 97.8 70 65.7
Eucgr.C03473 Eucalyptus grandis HOM05D003175 ORTHO05D003591 5.6e-19 97.4 57 73.7
ECA234G4558 Erigeron canadensis HOM05D003175 ORTHO05D003591 7.3e-19 97.1 55 76.4
FAN26G2348 Fragaria x ananassa HOM05D003175 ORTHO05D003591 7.3e-19 97.1 66 66.7
FvH4_1g07750 Fragaria vesca HOM05D003175 ORTHO05D003591 9.5e-19 96.7 64 67.2
FAN28G0810 Fragaria x ananassa HOM05D003175 ORTHO05D003591 9.5e-19 96.7 66 66.7
Hma1.2p1_3088F.1_g332510 Hydrangea macrophylla HOM05D003175 ORTHO05D003591 9.5e-19 96.7 76 64.5
TWI73G0679 Tripterygium wilfordii HOM05D003175 ORTHO05D003591 9.5e-19 96.7 66 66.7
Eucgr.C03471 Eucalyptus grandis HOM05D003175 ORTHO05D003591 1.2e-18 96.3 55 74.5
HanXRQChr10g0319441 Helianthus annuus HOM05D003175 ORTHO05D003591 1.2e-18 96.3 55 76.4
MELO3C015489.2 Cucumis melo HOM05D003175 ORTHO05D003591 1.6e-18 95.9 70 62.9
MBI16_g10338_MAGBIO Magnolia biondii HOM05D003175 ORTHO05D003591 1.6e-18 95.9 74 62.2
PSO063G1429 Papaver somniferum HOM05D003175 ORTHO05D003591 1.6e-18 95.9 66 62.1
AUR62003470 Chenopodium quinoa HOM05D003175 ORTHO05D003591 2.1e-18 95.5 65 66.2
Duzib168G1627 Durio zibethinus HOM05D003175 ORTHO05D003591 2.8e-18 95.1 68 66.2
Thhalv10014987m.g Eutrema salsugineum HOM05D003175 ORTHO05D003591 2.8e-18 95.1 72 63.9
Gohir.D05G031900 Gossypium hirsutum HOM05D003175 ORTHO05D003591 2.8e-18 95.1 66 66.7
Sp6g18640 Schrenkiella parvula HOM05D003175 ORTHO05D003591 2.8e-18 95.1 72 63.9
Sed0010998 Sechium edule HOM05D003175 ORTHO05D003591 2.8e-18 95.1 59 71.2
A10p14260 Brassica napus HOM05D003175 ORTHO05D003591 3.6e-18 94.7 68 64.7
BraA10t43517Z Brassica rapa HOM05D003175 ORTHO05D003591 3.6e-18 94.7 68 64.7
TWI09G0130 Tripterygium wilfordii HOM05D003175 ORTHO05D003591 3.6e-18 94.7 66 65.2
Atru.chr8.2333 Acer truncatum HOM05D003175 ORTHO05D003591 4.7e-18 94.4 71 63.4
Glyma.15G170800 Glycine max HOM05D003175 ORTHO05D003591 4.7e-18 94.4 72 62.5
Sed0014824 Sechium edule HOM05D003175 ORTHO05D003591 4.7e-18 94.4 70 65.7
PGSC0003DMG400022985 Solanum tuberosum HOM05D003175 ORTHO05D003591 4.7e-18 94.4 72 68.1
Sopen07g004590 Solanum pennellii HOM05D003175 ORTHO05D003591 6.2e-18 94.0 70 65.7
COL.COLO4_18186 Corchorus olitorius HOM05D003175 ORTHO05D003591 8.1e-18 93.6 68 64.7
Duzib150G0820 Durio zibethinus HOM05D003175 ORTHO05D003591 8.1e-18 93.6 57 73.7
Manes.01G198600 Manihot esculenta HOM05D003175 ORTHO05D003591 8.1e-18 93.6 58 70.7
Ciclev10013100m.g Citrus clementina HOM05D003175 ORTHO05D003591 1.1e-17 93.2 68 64.7
Gorai.009G032100 Gossypium raimondii HOM05D003175 ORTHO05D003591 1.1e-17 93.2 78 56.4
Sc18g0002200 Simmondsia chinensis HOM05D003175 ORTHO05D003591 1.1e-17 93.2 53 77.4
BcaB08g36038 Brassica carinata HOM05D003175 ORTHO05D003591 1.4e-17 92.8 72 62.5
CANSAT11G2123 Cannabis sativa HOM05D003175 ORTHO05D003591 1.4e-17 92.8 74 58.1
Nitab4.5_0004056g0030 Nicotiana tabacum HOM05D003175 ORTHO05D003591 1.4e-17 92.8 70 64.3
Peaxi162Scf01604g00008 Petunia axillaris HOM05D003175 ORTHO05D003591 1.4e-17 92.8 52 78.8
Solyc07g008660.3 Solanum lycopersicum HOM05D003175 ORTHO05D003591 1.4e-17 92.8 53 79.2
Nn8g40845 Nelumbo nucifera HOM05D003175 ORTHO05D003591 1.8e-17 92.4 55 72.7
Thecc.09G086900 Theobroma cacao HOM05D003175 ORTHO05D003591 1.8e-17 92.4 57 73.7
Zm00001eb317180 Zea mays HOM05D003175 ORTHO05D003591 1.8e-17 92.4 68 66.2
SGA_v2.0_scaffold49G18150 Striga asiatica HOM05D003175 ORTHO05D003591 2.4e-17 92.0 58 74.1
Cc06_g11550 Coffea canephora HOM05D003175 ORTHO05D003591 4.0e-17 91.3 76 64.5
Gohir.D10G066300 Gossypium hirsutum HOM05D003175 ORTHO05D003591 4.0e-17 91.3 78 55.1
Gorai.011G070400 Gossypium raimondii HOM05D003175 ORTHO05D003591 4.0e-17 91.3 78 55.1
SEGI_17182 Sequoiadendron giganteum HOM05D003175 ORTHO05D003591 4.0e-17 91.3 55 72.7
Aqoxy7G02783 Aquilegia oxysepala HOM05D003175 ORTHO05D003591 5.2e-17 90.9 67 61.2
BcaC03g14195 Brassica carinata HOM05D003175 ORTHO05D003591 5.2e-17 90.9 73 60.3
A02p08860 Brassica napus HOM05D003175 ORTHO05D003591 5.2e-17 90.9 73 60.3
C02p14770 Brassica napus HOM05D003175 ORTHO05D003591 5.2e-17 90.9 73 60.3
BolC2t07606H Brassica oleracea HOM05D003175 ORTHO05D003591 5.2e-17 90.9 73 60.3
BraA02t05955Z Brassica rapa HOM05D003175 ORTHO05D003591 5.2e-17 90.9 73 60.3
Glyma.09G064500 Glycine max HOM05D003175 ORTHO05D003591 5.2e-17 90.9 72 61.1
Gohir.A10G064800 Gossypium hirsutum HOM05D003175 ORTHO05D003591 6.8e-17 90.5 78 55.1
Os09g0498100 Oryza sativa ssp. japonica HOM05D003175 ORTHO05D003591 6.8e-17 90.5 70 64.3
Lsat_1_v5_gn_5_142921 Lactuca sativa HOM05D003175 ORTHO05D003591 8.9e-17 90.1 77 57.1
Phvul.009G231300 Phaseolus vulgaris HOM05D003175 ORTHO05D003591 8.9e-17 90.1 59 69.5
Gohir.A05G030500 Gossypium hirsutum HOM05D003175 ORTHO05D003591 1.2e-16 89.7 78 55.1
VMungo0251G0584 Vigna mungo HOM05D003175 ORTHO05D003591 1.2e-16 89.7 59 69.5
Migut.J00455 Erythranthe guttata HOM05D003175 ORTHO05D003591 1.5e-16 89.4 74 59.5
Lalb_Chr08g0232311 Lupinus albus HOM05D003175 ORTHO05D003591 1.5e-16 89.4 70 62.9
HanXRQChr12g0354621 Helianthus annuus HOM05D003175 ORTHO05D003591 2.0e-16 89.0 48 79.2
arahy.Tifrunner.gnm1.ann1.24WPAI Arachis hypogaea HOM05D003175 ORTHO05D003591 3.4e-16 88.2 62 69.4
arahy.Tifrunner.gnm1.ann1.TVN50Z Arachis hypogaea HOM05D003175 ORTHO05D003591 3.4e-16 88.2 62 69.4
PSO384G0167 Papaver somniferum HOM05D003175 ORTHO05D003591 4.4e-16 87.8 48 77.1
PSO384G0269 Papaver somniferum HOM05D003175 ORTHO05D003591 4.4e-16 87.8 48 77.1
VMungo0251G0230 Vigna mungo HOM05D003175 ORTHO05D003591 4.4e-16 87.8 59 67.8
Lj6g0021196 Lotus japonicus HOM05D003175 ORTHO05D003591 9.9e-16 86.7 67 62.7
Os08g0517900 Oryza sativa ssp. japonica HOM05D003175 ORTHO05D003591 1.3e-15 86.3 70 61.4
Hund04301 Selenicereus undatus HOM05D003175 ORTHO05D003591 1.7e-15 85.9 72 58.3
TPR.G13431 Trifolium pratense HOM05D003175 ORTHO05D003591 1.7e-15 85.9 61 62.3
PSO384G5082 Papaver somniferum HOM05D003175 ORTHO05D003591 2.2e-15 85.5 48 75.0
TPR.G10463 Trifolium pratense HOM05D003175 ORTHO05D003591 3.8e-15 84.7 48 77.1
Duzib187G0793 Durio zibethinus HOM05D003175 ORTHO05D003591 4.9e-15 84.3 68 58.8
ATR0626G012 Amborella trichopoda HOM05D003175 ORTHO05D003591 1.1e-14 83.2 65 60.0
Psat1g140000 Pisum sativum HOM05D003175 ORTHO05D003591 1.1e-14 83.2 60 63.3
ATR0724G037 Amborella trichopoda HOM05D003175 ORTHO05D003591 1.4e-14 82.8 65 60.0
Medtr2g039750 Medicago truncatula HOM05D003175 ORTHO05D003591 7.1e-14 80.5 48 72.9
BcaC01g06456 Brassica carinata HOM05D003175 ORTHO05D003591 1.6e-13 79.3 48 75.0
BcaNung05244 Brassica carinata HOM05D003175 ORTHO05D003591 1.6e-13 79.3 48 75.0
C03p15250 Brassica napus HOM05D003175 ORTHO05D003591 1.6e-13 79.3 48 75.0
Medtr5g014070 Medicago truncatula HOM05D003175 ORTHO05D003591 7.8e-13 77.0 74 50.0
Manes.05G131300 Manihot esculenta HOM05D003175 ORTHO05D003591 1.7e-12 75.9 48 68.8
TWI53G2020 Tripterygium wilfordii HOM05D003175 ORTHO05D003591 2.3e-12 75.5 75 54.7
BolC9t57700H Brassica oleracea HOM05D003175 ORTHO05D003591 1.1e-11 73.2 46 71.7
THA.LOC104804346 Tarenaya hassleriana HOM05D003175 ORTHO05D003591 8.1e-10 67.0 48 60.4
Aqoxy3G03231 Aquilegia oxysepala HOM05D003175 ORTHO05D003591 1.3e-07 59.7 74 40.5
AT4G34620 Arabidopsis thaliana HOM05D003175 ORTHO05D003591 2.2e-07 58.9 49 51.0
SEGI_09210 Sequoiadendron giganteum HOM05D003175 ORTHO05D003591 2.9e-07 58.5 48 58.3
Carub.0007s0566 Capsella rubella HOM05D003175 ORTHO05D003591 8.4e-07 57.0 49 51.0
vmacro12780 Vaccinium macrocarpon HOM05D003175 ORTHO05D003591 8.4e-07 57.0 26 96.2
BcaB01g04434 Brassica carinata HOM05D003175 ORTHO05D003591 1.1e-06 56.6 68 48.5
BcaNung04917 Brassica carinata HOM05D003175 ORTHO05D003591 1.4e-06 56.2 49 49.0
BcaNung04920 Brassica carinata HOM05D003175 ORTHO05D003591 1.4e-06 56.2 49 49.0
AL7G16580 Arabidopsis lyrata HOM05D003175 ORTHO05D003591 1.9e-06 55.8 49 49.0
BraA01t00374Z Brassica rapa HOM05D003175 ORTHO05D003591 3.2e-06 55.1 49 49.0
Thhalv10026606m.g Eutrema salsugineum HOM05D003175 ORTHO05D003591 3.2e-06 55.1 49 49.0
Sp7g32410 Schrenkiella parvula HOM05D003175 ORTHO05D003591 3.2e-06 55.1 49 49.0
BcaNung00682 Brassica carinata HOM05D003175 ORTHO05D003591 4.2e-06 54.7 49 49.0
C01p04180 Brassica napus HOM05D003175 ORTHO05D003591 4.2e-06 54.7 49 49.0
BolC1t00406H Brassica oleracea HOM05D003175 ORTHO05D003591 4.2e-06 54.7 49 49.0
A01p03870 Brassica napus HOM05D003175 ORTHO05D003591 7.1e-06 53.9 49 49.0
Aa31LG2G15900 Aethionema arabicum HOM05D003175 ORTHO05D003591 9.3e-06 53.5 58 51.7


User provided reference genes

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