Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro06195 Vaccinium macrocarpon HOM05D006224 ORTHO05D007691 3.0e-229 798.1 392 100.0
Rhsim03G0244800 Rhododendron simsii HOM05D006224 ORTHO05D007691 1.1e-175 620.2 434 74.7
Actinidia07421 Actinidia chinensis HOM05D006224 ORTHO05D007691 3.7e-163 578.6 392 74.2
Dinv41578 Davidia involucrata HOM05D006224 ORTHO05D007691 3.2e-154 548.9 392 70.9
CSS0033373 Camellia sinensis var. sinensis HOM05D006224 ORTHO05D007691 9.9e-140 500.7 414 66.7
QL02p086060 Quercus lobata HOM05D006224 ORTHO05D007691 9.3e-138 494.2 381 65.1
QL02p086023 Quercus lobata HOM05D006224 ORTHO05D007691 2.1e-134 483.0 359 67.4
Eucgr.E02819 Eucalyptus grandis HOM05D006224 ORTHO05D007691 2.4e-133 479.6 388 63.4
Cc06_g09350 Coffea canephora HOM05D006224 ORTHO05D007691 1.2e-132 477.2 381 64.8
Cfa003290 Carpinus fangiana HOM05D006224 ORTHO05D007691 2.6e-132 476.1 388 63.1
Manes.16G071100 Manihot esculenta HOM05D006224 ORTHO05D007691 2.6e-132 476.1 389 62.5
Ciclev10008608m.g Citrus clementina HOM05D006224 ORTHO05D007691 4.5e-132 475.3 404 61.4
TAR383G0021 Trochodendron aralioides HOM05D006224 ORTHO05D007691 5.8e-132 474.9 390 62.3
Hund26119 Selenicereus undatus HOM05D006224 ORTHO05D007691 1.7e-131 473.4 351 66.1
Lsat_1_v5_gn_8_94740 Lactuca sativa HOM05D006224 ORTHO05D007691 2.9e-131 472.6 348 67.2
arahy.Tifrunner.gnm1.ann1.X15ZNM Arachis hypogaea HOM05D006224 ORTHO05D007691 4.9e-131 471.9 386 61.4
Atru.chr7.1298 Acer truncatum HOM05D006224 ORTHO05D007691 1.1e-130 470.7 396 61.4
MD15G1189600 Malus domestica HOM05D006224 ORTHO05D007691 1.4e-130 470.3 347 68.0
HanXRQChr05g0138301 Helianthus annuus HOM05D006224 ORTHO05D007691 1.9e-130 469.9 407 59.5
Cpa.g.sc23.139 Carica papaya HOM05D006224 ORTHO05D007691 3.2e-130 469.2 348 66.4
arahy.Tifrunner.gnm1.ann1.NKB3PQ Arachis hypogaea HOM05D006224 ORTHO05D007691 4.2e-130 468.8 388 61.3
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 5.4e-130 468.4 346 66.8
PGSC0003DMG400024204 Solanum tuberosum HOM05D006224 ORTHO05D007691 7.1e-130 468.0 371 63.6
Glyma.09G187600 Glycine max HOM05D006224 ORTHO05D007691 3.5e-129 465.7 345 65.5
Sopen07g017160 Solanum pennellii HOM05D006224 ORTHO05D007691 3.5e-129 465.7 371 63.9
CiPaw.03G235000 Carya illinoinensis HOM05D006224 ORTHO05D007691 6.0e-129 464.9 388 62.6
Thecc.09G114600 Theobroma cacao HOM05D006224 ORTHO05D007691 7.9e-129 464.5 404 60.1
GSVIVG01015431001 Vitis vinifera HOM05D006224 ORTHO05D007691 1.0e-128 464.2 399 61.9
Nitab4.5_0013433g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 1.8e-128 463.4 343 67.3
Sed0009228 Sechium edule HOM05D006224 ORTHO05D007691 1.8e-128 463.4 385 63.6
Solyc07g009170.4 Solanum lycopersicum HOM05D006224 ORTHO05D007691 2.3e-128 463.0 371 63.3
GSVIVG01015429001 Vitis vinifera HOM05D006224 ORTHO05D007691 2.3e-128 463.0 401 61.8
CANSAT56G1593 Cannabis sativa HOM05D006224 ORTHO05D007691 3.0e-128 462.6 358 64.5
CANSAT56G0016 Cannabis sativa HOM05D006224 ORTHO05D007691 3.9e-128 462.2 358 64.8
Haze_25683 Corylus avellana HOM05D006224 ORTHO05D007691 1.5e-127 460.3 384 62.8
Phvul.004G160700 Phaseolus vulgaris HOM05D006224 ORTHO05D007691 1.9e-127 459.9 380 62.9
TWI34G0303 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 2.5e-127 459.5 385 60.5
DCAR_010440 Daucus carota HOM05D006224 ORTHO05D007691 3.3e-127 459.1 338 66.9
AUR62011028 Chenopodium quinoa HOM05D006224 ORTHO05D007691 4.3e-127 458.8 375 62.7
Lalb_Chr14g0371331 Lupinus albus HOM05D006224 ORTHO05D007691 9.6e-127 457.6 346 65.0
Nitab4.5_0002361g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 2.1e-126 456.4 377 62.1
FAN23G1546 Fragaria x ananassa HOM05D006224 ORTHO05D007691 3.6e-126 455.7 382 61.5
FvH4_1g05360 Fragaria vesca HOM05D006224 ORTHO05D007691 1.4e-125 453.8 342 65.8
AT5G19460 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 5.3e-125 451.8 376 61.7
ClCG06G010400 Citrullus lanatus HOM05D006224 ORTHO05D007691 5.3e-125 451.8 382 61.3
RcHm_v2.0_Chr2g0091041 Rosa chinensis HOM05D006224 ORTHO05D007691 3.4e-124 449.1 334 66.5
FAN19G0264 Fragaria x ananassa HOM05D006224 ORTHO05D007691 4.5e-124 448.7 347 64.8
FAN26G2363 Fragaria x ananassa HOM05D006224 ORTHO05D007691 9.9e-124 447.6 380 61.3
Thhalv10013889m.g Eutrema salsugineum HOM05D006224 ORTHO05D007691 1.3e-123 447.2 375 61.6
TWI34G1467 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 1.7e-123 446.8 348 62.4
MELO3C025318.2 Cucumis melo HOM05D006224 ORTHO05D007691 2.9e-123 446.0 342 64.0
Lj2g0020407 Lotus japonicus HOM05D006224 ORTHO05D007691 4.9e-123 445.3 356 62.6
Migut.K00473 Erythranthe guttata HOM05D006224 ORTHO05D007691 6.4e-123 444.9 351 62.7
AL6G30950 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 1.1e-122 444.1 360 63.3
Ca_30117_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 1.1e-122 444.1 355 63.1
Gohir.A08G240600 Gossypium hirsutum HOM05D006224 ORTHO05D007691 1.4e-122 443.7 397 57.9
Gorai.004G279400 Gossypium raimondii HOM05D006224 ORTHO05D007691 2.4e-122 443.0 397 57.9
Gohir.D08G261300 Gossypium hirsutum HOM05D006224 ORTHO05D007691 5.5e-122 441.8 397 57.7
Aa31LG11G5060 Aethionema arabicum HOM05D006224 ORTHO05D007691 2.7e-121 439.5 354 62.1
Glyma.18G076000 Glycine max HOM05D006224 ORTHO05D007691 2.7e-121 439.5 344 63.4
Sc08g0007140 Simmondsia chinensis HOM05D006224 ORTHO05D007691 2.7e-121 439.5 348 64.1
Aqoxy5G03788 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 3.5e-121 439.1 380 60.0
MBI06_g04550_MAGBIO Magnolia biondii HOM05D006224 ORTHO05D007691 3.5e-121 439.1 413 55.9
Ciclev10008605m.g Citrus clementina HOM05D006224 ORTHO05D007691 4.6e-121 438.7 404 56.9
CsaV3_1G030820 Cucumis sativus L. HOM05D006224 ORTHO05D007691 6.0e-121 438.3 393 58.5
Carub.0006s1780 Capsella rubella HOM05D006224 ORTHO05D007691 1.0e-120 437.6 369 60.7
Duzib187G0885 Durio zibethinus HOM05D006224 ORTHO05D007691 3.0e-120 436.0 408 59.1
Peaxi162Scf00560g00629 Petunia axillaris HOM05D006224 ORTHO05D007691 3.0e-120 436.0 371 61.7
ClCG00G002210 Citrullus lanatus HOM05D006224 ORTHO05D007691 5.1e-120 435.3 355 62.8
ClCG06G010410 Citrullus lanatus HOM05D006224 ORTHO05D007691 5.1e-120 435.3 355 62.8
Medtr6g086510 Medicago truncatula HOM05D006224 ORTHO05D007691 6.7e-120 434.9 393 58.0
PSO063G0773 Papaver somniferum HOM05D006224 ORTHO05D007691 8.7e-120 434.5 379 58.8
CDE04G0176 Ceratophyllum demersum HOM05D006224 ORTHO05D007691 2.5e-119 433.0 380 57.1
SalBow1G0968 Salvia bowleyana HOM05D006224 ORTHO05D007691 2.5e-119 433.0 374 57.5
BolC9t58538H Brassica oleracea HOM05D006224 ORTHO05D007691 3.3e-119 432.6 380 60.3
Sp6g24950 Schrenkiella parvula HOM05D006224 ORTHO05D007691 3.3e-119 432.6 386 59.6
EL10Ac8g18541 Beta vulgaris HOM05D006224 ORTHO05D007691 4.3e-119 432.2 381 59.1
FAN28G2414 Fragaria x ananassa HOM05D006224 ORTHO05D007691 2.1e-118 429.9 342 63.5
PSO782G3139 Papaver somniferum HOM05D006224 ORTHO05D007691 3.7e-118 429.1 378 58.2
Oeu060631.1 Olea europaea HOM05D006224 ORTHO05D007691 6.2e-118 428.3 349 61.6
PGR042G0994 Punica granatum HOM05D006224 ORTHO05D007691 6.2e-118 428.3 374 59.1
ClCG00G002580 Citrullus lanatus HOM05D006224 ORTHO05D007691 8.1e-118 427.9 348 62.9
ATR0037G051 Amborella trichopoda HOM05D006224 ORTHO05D007691 3.1e-117 426.0 345 59.7
Potri.006G157700 Populus trichocarpa HOM05D006224 ORTHO05D007691 1.7e-115 420.2 381 59.8
Zm00001eb309830 Zea mays HOM05D006224 ORTHO05D007691 2.2e-115 419.9 345 59.1
AL6G30960 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 5.5e-114 415.2 379 57.8
A10p20240 Brassica napus HOM05D006224 ORTHO05D007691 5.5e-114 415.2 315 66.3
Psat1g037920 Pisum sativum HOM05D006224 ORTHO05D007691 5.5e-114 415.2 315 65.7
HPP92_009101 Vanilla planifolia HOM05D006224 ORTHO05D007691 2.7e-113 412.9 359 57.1
CAN.G929.19 Capsicum annuum HOM05D006224 ORTHO05D007691 8.7e-112 407.9 287 67.9
Ca_25513_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 4.3e-111 405.6 309 65.7
ECA236G3755 Erigeron canadensis HOM05D006224 ORTHO05D007691 7.4e-111 404.8 293 68.6
AT5G19470 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 6.3e-110 401.7 379 56.2
Aqoxy5G03790 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 3.1e-109 399.4 339 58.7
FAN26G3318 Fragaria x ananassa HOM05D006224 ORTHO05D007691 4.1e-109 399.1 403 54.1
THA.LOC104799742 Tarenaya hassleriana HOM05D006224 ORTHO05D007691 7.6e-108 394.8 298 64.4
C09p56840 Brassica napus HOM05D006224 ORTHO05D007691 5.0e-107 392.1 380 56.8
Sabra06G0124600 Salix brachista HOM05D006224 ORTHO05D007691 4.2e-106 389.0 369 58.3
SGA_v2.0_scaffold23G10152 Striga asiatica HOM05D006224 ORTHO05D007691 2.7e-105 386.3 391 54.0
TPR.G31456 Trifolium pratense HOM05D006224 ORTHO05D007691 1.3e-104 384.0 327 59.3
BraA10t44095Z Brassica rapa HOM05D006224 ORTHO05D007691 4.8e-102 375.6 289 65.7
Nn8g39262 Nelumbo nucifera HOM05D006224 ORTHO05D007691 6.3e-102 375.2 395 53.2
TPR.G31453 Trifolium pratense HOM05D006224 ORTHO05D007691 6.9e-101 371.7 361 54.8
Lj7A644T17 Lonicera japonica HOM05D006224 ORTHO05D007691 1.2e-100 370.9 399 52.4
Peaxi162Scf00560g00615 Petunia axillaris HOM05D006224 ORTHO05D007691 4.4e-95 352.4 316 59.2
Pp3c12_9090 Physcomitrium patens HOM05D006224 ORTHO05D007691 1.0e-91 341.3 348 51.1
Mapoly0084s0007 Marchantia polymorpha HOM05D006224 ORTHO05D007691 5.5e-90 335.5 320 52.8
HanXRQChr05g0139161 Helianthus annuus HOM05D006224 ORTHO05D007691 3.6e-89 332.8 371 50.1
Potri.006G157800 Populus trichocarpa HOM05D006224 ORTHO05D007691 4.8e-86 322.4 387 49.9
SMO347G0504 Selaginella moellendorffii HOM05D006224 ORTHO05D007691 7.2e-82 308.5 309 51.8
Prupe.7G186600 Prunus persica HOM05D006224 ORTHO05D007691 3.7e-78 296.2 214 67.8
Cre13.g582201 Chlamydomonas reinhardtii HOM05D006224 ORTHO05D007691 8.8e-72 275.0 316 46.5
AUR62033400 Chenopodium quinoa HOM05D006224 ORTHO05D007691 1.2e-71 274.6 247 56.7
unitig_748.g7154 Utricularia gibba HOM05D006224 ORTHO05D007691 4.4e-71 272.7 223 61.4
AagrBONN_evm.TU.Sc2ySwM_228.2202 Anthoceros agrestis HOM05D006224 ORTHO05D007691 3.5e-68 263.1 207 60.9
Pp3c3_27400 Physcomitrium patens HOM05D006224 ORTHO05D007691 3.4e-63 246.5 304 40.5
Pp3c6_16000 Physcomitrium patens HOM05D006224 ORTHO05D007691 3.1e-61 240.0 314 40.4
MCO11G748 Micromonas commoda HOM05D006224 ORTHO05D007691 1.0e-56 224.9 307 41.4
PRCOL_00004258 Prasinoderma coloniale HOM05D006224 ORTHO05D007691 5.4e-53 212.6 312 40.7
CARHR193460 Cardamine hirsuta HOM05D006224 ORTHO05D007691 2.2e-46 190.7 144 66.0
Os09g0322200 Oryza sativa ssp. japonica HOM05D006224 ORTHO05D007691 7.1e-37 159.1 147 53.1
Ah.09g227190 Amaranthus hybridus HOM05D006224 ORTHO05D007691 8.9e-32 142.1 105 66.7
unitig_748.g7155 Utricularia gibba HOM05D006224 ORTHO05D007691 1.7e-30 137.9 100 65.0
Cfa025487 Carpinus fangiana HOM05D006224 ORTHO05D007691 4.1e-29 133.3 196 39.8
SEGI_32758 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 2.9e-22 110.5 69 69.6
vmacro11393 Vaccinium macrocarpon HOM05D003441 ORTHO05D004516 1.9e-18 97.8 51 88.2
MSTRG.26438 Avicennia marina HOM05D006224 ORTHO05D007691 5.8e-15 86.3 98 52.0
SEGI_12041 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 1.1e-08 65.5 80 48.8
SEGI_03040 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 8.4e-06 55.8 79 39.2


User provided reference genes

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