Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 0.0e+00 1156.0 844 100.0
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 9.0e-215 751.1 781 82.1
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 5.0e-197 692.2 540 75.7
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 2.9e-152 543.5 554 65.5
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 6.4e-152 542.3 554 65.3
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 2.3e-141 507.3 778 58.2
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 7.3e-140 502.3 775 56.8
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 1.1e-135 488.4 767 67.0
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 1.2e-134 485.0 767 66.5
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 2.7e-134 483.8 676 74.9
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 5.1e-133 479.6 781 64.9
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 1.3e-131 474.9 771 67.7
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 1.1e-130 471.9 771 66.9
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 3.1e-130 470.3 775 63.5
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 9.0e-130 468.8 786 53.8
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 7.6e-129 465.7 783 63.9
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 1.4e-127 461.5 469 51.8
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 1.9e-127 461.1 767 67.1
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 3.5e-126 456.8 767 67.0
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 1.3e-125 454.9 774 65.9
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 1.1e-124 451.8 774 65.4
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 3.6e-123 446.8 538 55.0
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 4.8e-123 446.4 772 63.7
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 6.2e-123 446.0 772 63.7
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 2.4e-122 444.1 772 64.5
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 3.1e-122 443.7 779 43.3
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 3.1e-122 443.7 779 43.3
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 2.6e-121 440.7 777 60.4
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 2.9e-120 437.2 769 61.9
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 3.8e-120 436.8 587 67.3
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 4.9e-120 436.4 772 62.8
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 2.4e-119 434.1 767 65.6
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 4.2e-119 433.3 679 66.4
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 9.3e-119 432.2 816 60.8
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 2.1e-118 431.0 536 45.3
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 1.0e-117 428.7 560 53.8
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 2.3e-117 427.6 541 57.3
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 5.1e-117 426.4 560 52.3
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 1.5e-116 424.9 665 67.4
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 1.9e-116 424.5 541 55.1
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 5.6e-116 422.9 540 54.3
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 9.6e-116 422.2 701 65.2
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 1.4e-114 418.3 522 57.3
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 5.3e-114 416.4 770 62.7
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 6.9e-114 416.0 773 62.9
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 9.0e-114 415.6 681 65.6
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 1.5e-113 414.8 690 66.4
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 7.6e-113 412.5 718 62.1
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 6.5e-112 409.5 548 55.3
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 1.1e-111 408.7 467 60.2
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 1.1e-111 408.7 551 54.4
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 2.5e-111 407.5 565 79.6
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 7.1e-111 406.0 640 69.5
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 7.1e-111 406.0 783 54.0
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 1.8e-109 401.4 508 54.3
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 1.8e-109 401.4 539 54.0
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 6.7e-109 399.4 413 61.3
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 1.1e-108 398.7 468 57.5
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 3.3e-108 397.1 538 48.7
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 4.3e-108 396.7 367 66.8
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 1.3e-107 395.2 542 52.2
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.6e-107 394.8 439 60.1
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 2.1e-107 394.4 537 52.7
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 4.8e-107 393.3 590 50.3
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 6.3e-107 392.9 369 65.9
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 1.1e-106 392.1 538 52.4
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 2.4e-106 391.0 439 57.6
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 2.4e-106 391.0 686 60.5
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 6.9e-106 389.4 570 48.4
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 6.9e-106 389.4 446 59.4
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 9.0e-106 389.0 439 59.9
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 1.5e-105 388.3 531 52.5
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 2.0e-105 387.9 569 47.5
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 2.6e-105 387.5 687 60.4
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 4.5e-105 386.7 550 76.2
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 3.8e-104 383.6 550 51.5
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 3.8e-104 383.6 542 77.9
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 1.4e-103 381.7 531 52.7
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 3.2e-103 380.6 599 63.9
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 3.2e-103 380.6 472 58.1
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 4.2e-103 380.2 537 52.9
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 7.2e-103 379.4 357 67.2
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 9.3e-103 379.0 521 53.0
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 6.1e-102 376.3 539 51.4
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 1.8e-101 374.8 545 51.9
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 3.0e-101 374.0 531 47.5
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 1.9e-100 371.3 433 56.8
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 5.9e-97 359.8 338 66.9
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 1.3e-96 358.6 345 59.1
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 3.8e-96 357.1 368 64.7
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 1.9e-95 354.8 330 66.4
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 3.6e-94 350.5 585 65.0
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 1.4e-93 348.6 384 59.1
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 1.4e-93 348.6 377 65.0
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 1.4e-93 348.6 377 65.0
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 5.7e-92 343.2 370 65.4
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 1.3e-91 342.0 377 64.7
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 3.7e-91 340.5 370 65.1
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 3.6e-86 323.9 373 57.6
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 1.3e-83 315.5 427 57.8
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 7.0e-82 309.7 444 53.2
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 2.5e-71 274.6 196 64.3
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 4.1e-66 257.3 531 43.5
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 2.0e-60 238.4 368 40.8
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 1.4e-53 215.7 548 31.2
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.8e-53 215.3 196 56.6
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 1.7e-43 182.2 373 46.9
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 3.3e-39 167.9 412 37.9
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 5.8e-28 130.6 421 40.1
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 2.5e-23 115.2 169 35.5
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 5.2e-21 107.5 106 50.0
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 9.0e-21 106.7 142 42.3
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 5.4e-18 97.4 61 70.5
SalBow1G4926 Salvia bowleyana HOM05D006844 ORTHO05D008504 1.0e-16 93.2 67 61.2
vmacro05905 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 6.7e-08 63.9 37 81.1
ClCG10G015760 Citrullus lanatus HOM05D006106 ORTHO05D007662 4.8e-06 57.8 142 23.2


User provided reference genes

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