Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 1.2e-222 776.5 521 100.0
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 3.4e-180 635.6 428 89.5
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 1.2e-177 627.1 365 84.1
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 4.5e-156 555.4 368 74.5
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 1.2e-153 547.4 358 75.1
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 5.2e-144 515.4 340 74.7
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 8.5e-139 498.0 360 65.8
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 8.0e-137 491.5 353 67.7
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 2.4e-133 479.9 337 66.2
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 3.1e-133 479.6 354 68.9
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 9.1e-133 478.0 353 70.3
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 2.7e-132 476.5 349 69.3
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 3.5e-132 476.1 366 66.1
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 3.5e-132 476.1 363 68.6
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 5.0e-131 472.2 363 61.7
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 3.2e-130 469.5 359 64.6
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 4.2e-130 469.2 366 64.8
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 5.5e-130 468.8 363 63.6
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 2.1e-129 466.8 348 64.4
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 3.6e-129 466.1 337 64.4
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 3.6e-129 466.1 337 64.4
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 4.7e-129 465.7 352 64.2
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 4.7e-129 465.7 362 63.3
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 8.0e-129 464.9 352 64.8
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 4.0e-128 462.6 357 65.5
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 4.0e-128 462.6 366 60.1
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 4.0e-128 462.6 361 63.4
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 4.0e-128 462.6 365 66.6
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 8.8e-128 461.5 349 62.5
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 1.2e-127 461.1 356 63.5
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 5.7e-127 458.8 373 59.0
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 7.5e-127 458.4 348 63.5
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 7.5e-127 458.4 346 65.0
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 1.7e-126 457.2 366 60.1
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 3.7e-126 456.1 352 63.1
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 4.8e-126 455.7 365 64.1
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 4.8e-126 455.7 339 63.4
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 4.8e-126 455.7 367 60.8
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 6.3e-126 455.3 370 58.4
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 6.3e-126 455.3 349 61.9
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 9.1e-125 451.4 309 68.6
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 2.3e-123 446.8 352 63.6
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 3.3e-122 443.0 373 59.0
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 4.2e-122 442.6 352 61.9
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 9.5e-122 441.4 367 60.8
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 9.5e-122 441.4 373 55.8
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 1.2e-121 441.0 305 66.9
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 2.1e-121 440.3 352 61.6
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 3.6e-121 439.5 392 56.9
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 8.0e-121 438.3 365 62.2
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 6.8e-120 435.3 333 64.3
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 1.2e-119 434.5 343 60.1
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 1.5e-119 434.1 366 57.1
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 4.4e-119 432.6 335 60.0
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 5.7e-119 432.2 338 59.8
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 7.5e-119 431.8 366 60.7
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 1.3e-118 431.0 359 56.8
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 6.3e-118 428.7 363 59.5
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 1.1e-117 427.9 356 61.2
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 2.4e-117 426.8 365 56.2
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 3.2e-117 426.4 369 58.8
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 3.2e-117 426.4 367 56.1
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 5.4e-117 425.6 369 55.6
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 7.0e-117 425.2 366 55.7
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 7.0e-117 425.2 337 60.2
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 9.2e-117 424.9 362 57.7
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 1.2e-116 424.5 356 61.0
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 3.5e-116 422.9 362 61.6
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 3.5e-116 422.9 337 64.1
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 3.5e-116 422.9 308 66.2
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 1.7e-115 420.6 359 56.8
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 8.6e-115 418.3 339 62.5
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 8.6e-115 418.3 347 55.9
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 1.1e-114 417.9 307 65.1
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 4.3e-114 416.0 336 60.1
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 9.5e-114 414.8 359 59.1
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 6.1e-113 412.1 363 56.5
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 8.0e-113 411.8 346 58.4
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 8.0e-113 411.8 357 60.8
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 1.4e-112 411.0 325 60.9
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 1.8e-112 410.6 363 60.6
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 8.9e-112 408.3 357 54.9
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 2.0e-111 407.1 368 54.6
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 3.4e-111 406.4 348 55.5
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 3.4e-111 406.4 248 79.4
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 4.4e-111 406.0 368 54.6
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 4.4e-111 406.0 339 59.9
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 4.4e-111 406.0 361 55.1
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 5.8e-111 405.6 360 55.8
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 9.8e-111 404.8 361 56.8
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 1.7e-110 404.1 351 62.7
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 2.2e-110 403.7 323 59.4
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 2.9e-110 403.3 363 59.0
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 1.9e-109 400.6 381 57.7
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 5.4e-109 399.1 306 64.4
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 1.6e-108 397.5 378 54.5
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 3.5e-108 396.4 361 52.6
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 7.8e-108 395.2 369 52.6
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 7.8e-108 395.2 356 59.0
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 7.8e-108 395.2 306 65.4
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 1.7e-107 394.0 360 52.2
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 8.6e-107 391.7 367 53.1
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 4.3e-106 389.4 366 56.0
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 1.1e-104 384.8 354 53.1
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 2.9e-102 376.7 373 54.2
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 2.9e-102 376.7 375 52.3
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 4.9e-102 375.9 352 55.1
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 4.9e-102 375.9 358 53.6
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 6.4e-102 375.6 367 52.3
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 1.4e-101 374.4 370 51.6
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 1.9e-101 374.0 370 51.6
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 3.2e-101 373.2 337 58.2
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 1.2e-100 371.3 350 54.9
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 6.0e-100 369.0 368 52.7
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 7.8e-100 368.6 367 51.5
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 2.5e-98 363.6 354 54.8
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 2.5e-98 363.6 354 55.1
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 3.3e-98 363.2 359 51.8
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 2.8e-97 360.1 365 51.8
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 3.6e-97 359.8 357 51.8
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 3.6e-97 359.8 354 54.5
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 3.6e-97 359.8 341 54.5
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 1.1e-96 358.2 339 56.3
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 6.8e-96 355.5 269 61.7
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 5.8e-95 352.4 340 52.4
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.1e-93 348.2 268 66.8
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 1.9e-93 347.4 419 43.4
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 4.6e-92 342.8 342 56.4
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 6.6e-91 339.0 359 48.2
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 1.9e-90 337.4 358 49.7
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 1.9e-90 337.4 358 49.7
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 9.6e-90 335.1 365 48.8
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 1.2e-89 334.7 359 47.9
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 2.8e-89 333.6 298 56.7
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 6.2e-89 332.4 358 48.0
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 1.1e-88 331.6 286 54.5
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 1.2e-87 328.2 289 55.0
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 2.3e-83 313.9 368 47.0
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 3.5e-76 290.0 318 44.7
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 7.9e-76 288.9 230 63.9
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 2.3e-75 287.3 268 58.2
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 4.0e-72 276.6 330 42.7
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 2.9e-70 270.4 328 41.8
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 5.4e-69 266.2 319 47.0
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.2e-68 265.0 322 47.2
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 5.6e-66 256.1 322 46.0
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 2.8e-65 253.8 322 46.0
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 2.6e-63 247.3 337 40.1
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 1.3e-59 235.0 322 45.3
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 1.8e-56 224.6 290 41.7
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 2.4e-56 224.2 314 38.9
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 9.0e-56 222.2 364 36.8
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 4.5e-55 219.9 189 52.4
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.9e-53 214.5 304 39.8
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.9e-53 214.5 304 39.8
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 2.5e-53 214.2 320 35.3
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 3.7e-49 200.3 310 35.8
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 4.8e-49 199.9 136 68.4
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.8e-48 198.0 251 46.6
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 8.5e-46 189.1 271 35.4
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 9.4e-45 185.7 191 46.6
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 3.6e-44 183.7 157 56.1
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.1e-40 172.2 118 68.6
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 3.4e-39 167.2 134 59.7
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 8.5e-38 162.5 110 69.1
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.0e-35 155.6 164 54.3
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.5e-34 151.8 161 49.7
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.3e-30 138.7 258 38.0
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 1.4e-24 118.6 84 61.9
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 9.4e-21 105.9 130 46.9
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 9.8e-18 95.9 90 51.1
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 1.1e-16 92.4 71 60.6
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 2.0e-15 88.2 55 65.5
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 5.9e-15 86.7 258 30.2
Actinidia30544 Actinidia chinensis HOM05D000861 ORTHO05D038136 4.0e-11 73.9 58 70.7


User provided reference genes

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