Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05461 Vaccinium macrocarpon HOM05D003226 ORTHO05D038364 0.0e+00 1251.5 641 100.0
CSS0044326 Camellia sinensis var. sinensis HOM05D003226 ORTHO05D005723 5.2e-29 133.7 111 66.7
Dinv33760 Davidia involucrata HOM05D003226 ORTHO05D005723 2.4e-26 124.8 100 71.0
vmacro02215 Vaccinium macrocarpon HOM05D003226 ORTHO05D005723 7.0e-26 123.2 91 71.4
Peaxi162Scf00129g00132 Petunia axillaris HOM05D003226 ORTHO05D005723 5.9e-25 120.2 98 66.3
Rhsim10G0039000 Rhododendron simsii HOM05D003226 ORTHO05D005723 5.9e-25 120.2 125 58.4
CAN.G206.153 Capsicum annuum HOM05D003226 ORTHO05D005723 2.9e-24 117.9 116 58.6
Peaxi162Scf00011g02911 Petunia axillaris HOM05D003226 ORTHO05D005723 2.9e-24 117.9 164 47.0
DCAR_025375 Daucus carota HOM05D003226 ORTHO05D005723 1.5e-23 115.5 100 64.0
Nitab4.5_0000274g0210 Nicotiana tabacum HOM05D003226 ORTHO05D005723 1.5e-23 115.5 165 46.7
Nitab4.5_0026203g0010 Nicotiana tabacum HOM05D003226 ORTHO05D005723 1.5e-23 115.5 165 46.7
arahy.Tifrunner.gnm1.ann1.R713I2 Arachis hypogaea HOM05D003226 ORTHO05D005723 9.5e-23 112.8 112 58.9
arahy.Tifrunner.gnm1.ann1.WKF5J8 Arachis hypogaea HOM05D003226 ORTHO05D005723 9.5e-23 112.8 112 58.9
Lsat_1_v5_gn_3_101601 Lactuca sativa HOM05D003226 ORTHO05D005723 9.5e-23 112.8 158 44.9
TAR375G0513 Trochodendron aralioides HOM05D003226 ORTHO05D005723 9.5e-23 112.8 164 45.1
Hma1.2p1_0409F.1_g146951 Hydrangea macrophylla HOM05D003226 ORTHO05D005723 1.2e-22 112.5 116 57.8
TAR381G0539 Trochodendron aralioides HOM05D003226 ORTHO05D005723 2.8e-22 111.3 147 47.6
ECA246G4217 Erigeron canadensis HOM05D003226 ORTHO05D005723 3.6e-22 110.9 102 58.8
Lj7C393G0 Lonicera japonica HOM05D003226 ORTHO05D005723 3.6e-22 110.9 135 52.6
Cc07_g03380 Coffea canephora HOM05D003226 ORTHO05D005723 4.7e-22 110.5 117 56.4
VMungo0464G1600 Vigna mungo HOM05D003226 ORTHO05D005723 4.7e-22 110.5 102 59.8
Migut.H00924 Erythranthe guttata HOM05D003226 ORTHO05D005723 6.1e-22 110.2 155 45.2
TWI34G0415 Tripterygium wilfordii HOM05D003226 ORTHO05D005723 8.0e-22 109.8 135 49.6
Sed0013037 Sechium edule HOM05D003226 ORTHO05D005723 1.0e-21 109.4 100 64.0
Prupe.3G267300 Prunus persica HOM05D003226 ORTHO05D005723 3.1e-21 107.8 191 42.4
Sed0006229 Sechium edule HOM05D003226 ORTHO05D005723 3.1e-21 107.8 122 52.5
AT5G48600 Arabidopsis thaliana HOM05D003226 ORTHO05D005723 5.2e-21 107.1 96 62.5
FAN15G3277 Fragaria x ananassa HOM05D003226 ORTHO05D005723 5.2e-21 107.1 100 62.0
Haze_14528 Corylus avellana HOM05D003226 ORTHO05D005723 6.8e-21 106.7 72 76.4
CiPaw.03G026700 Carya illinoinensis HOM05D003226 ORTHO05D005723 8.9e-21 106.3 74 73.0
Atru.chr8.162 Acer truncatum HOM05D003226 ORTHO05D005723 1.2e-20 105.9 85 68.2
GSVIVG01011408001 Vitis vinifera HOM05D003226 ORTHO05D005723 1.5e-20 105.5 91 60.4
PGR004G1048 Punica granatum HOM05D003226 ORTHO05D005723 2.0e-20 105.1 128 53.1
FAN20G3149 Fragaria x ananassa HOM05D003226 ORTHO05D005723 3.4e-20 104.4 121 51.2
SalBow1G4412 Salvia bowleyana HOM05D003226 ORTHO05D005723 3.4e-20 104.4 100 62.0
Solyc02g087980.3 Solanum lycopersicum HOM05D003226 ORTHO05D005723 3.4e-20 104.4 77 70.1
Psat4g106040 Pisum sativum HOM05D003226 ORTHO05D005723 5.8e-20 103.6 103 57.3
CsaV3_5G027630 Cucumis sativus L. HOM05D003226 ORTHO05D005723 7.5e-20 103.2 100 60.0
PGSC0003DMG400001326 Solanum tuberosum HOM05D003226 ORTHO05D005723 7.5e-20 103.2 77 70.1
Manes.02G046500 Manihot esculenta HOM05D003226 ORTHO05D005723 1.3e-19 102.4 133 48.9
RcHm_v2.0_Chr6g0300801 Rosa chinensis HOM05D003226 ORTHO05D005723 1.3e-19 102.4 199 41.7
SGA_v2.0_scaffold499G52482 Striga asiatica HOM05D003226 ORTHO05D005723 1.3e-19 102.4 100 60.0
MBI18_g02834_MAGBIO Magnolia biondii HOM05D003226 ORTHO05D005723 1.7e-19 102.1 151 43.0
Aqoxy6G02361 Aquilegia oxysepala HOM05D003226 ORTHO05D005723 6.4e-19 100.1 137 47.4
Carub.0005s0749 Capsella rubella HOM05D003226 ORTHO05D005723 6.4e-19 100.1 100 58.0
vmacro05694 Vaccinium macrocarpon HOM05D003226 ORTHO05D005723 8.3e-19 99.8 248 37.9
Cfa007554 Carpinus fangiana HOM05D003226 ORTHO05D005723 1.9e-18 98.6 69 73.9
QL02p063973 Quercus lobata HOM05D003226 ORTHO05D005723 1.9e-18 98.6 83 67.5
MELO3C022910.2 Cucumis melo HOM05D003226 ORTHO05D005723 3.2e-18 97.8 119 51.3
FvH4_2g39941 Fragaria vesca HOM05D003226 ORTHO05D005723 3.2e-18 97.8 196 40.8
HanXRQChr15g0473961 Helianthus annuus HOM05D003226 ORTHO05D005723 7.0e-18 96.7 129 47.3
HPP92_015724 Vanilla planifolia HOM05D003226 ORTHO05D005723 7.0e-18 96.7 102 54.9
THA.LOC104805468 Tarenaya hassleriana HOM05D003226 ORTHO05D005723 2.7e-17 94.7 92 58.7
RcHm_v2.0_Chr7g0223741 Rosa chinensis HOM05D003226 ORTHO05D005723 6.0e-17 93.6 107 51.4
Thhalv10003529m.g Eutrema salsugineum HOM05D003226 ORTHO05D005723 1.0e-16 92.8 153 43.8
Actinidia06098 Actinidia chinensis HOM05D003226 ORTHO05D005723 2.3e-16 91.7 290 33.8
Glyma.13G062800 Glycine max HOM05D003226 ORTHO05D005723 8.6e-16 89.7 149 43.0
Potri.017G083200 Populus trichocarpa HOM05D003226 ORTHO05D005723 1.9e-15 88.6 158 41.8
Ca_22432_v3 Cicer arietinum L. HOM05D003226 ORTHO05D005723 4.3e-15 87.4 105 47.6
FvH4_5g30910 Fragaria vesca HOM05D003226 ORTHO05D005723 4.3e-15 87.4 107 48.6
RcHm_v2.0_Chr7g0226461 Rosa chinensis HOM05D003226 ORTHO05D005723 2.1e-14 85.1 213 33.8
SGA_v2.0_scaffold1G00329 Striga asiatica HOM05D003226 ORTHO05D005723 2.3e-13 81.6 69 63.8
Sp2g17560 Schrenkiella parvula HOM05D003226 ORTHO05D005723 1.2e-12 79.3 95 51.6
Aqoxy293s003 Aquilegia oxysepala HOM05D003226 ORTHO05D005723 2.0e-12 78.6 61 67.2
AL8G21600 Arabidopsis lyrata HOM05D003226 ORTHO05D005723 3.4e-12 77.8 77 55.8
Sabra17G0073700 Salix brachista HOM05D003226 ORTHO05D005723 5.8e-12 77.0 195 36.9
Nn4g25634 Nelumbo nucifera HOM05D003226 ORTHO05D005723 2.2e-11 75.1 102 47.1
Ah.10g031620 Amaranthus hybridus HOM05D003226 ORTHO05D005723 2.9e-11 74.7 281 29.2
MD02G1198100 Malus domestica HOM05D003226 ORTHO05D005723 2.9e-11 74.7 112 42.9
Aqoxy5G00921 Aquilegia oxysepala HOM05D003226 ORTHO05D005723 4.9e-11 73.9 143 39.2
Lalb_Chr21g0318701 Lupinus albus HOM05D003226 ORTHO05D005723 8.3e-11 73.2 131 38.2
ClCG11G000030 Citrullus lanatus HOM05D003226 ORTHO05D005723 1.1e-10 72.8 248 30.2
PSO017G5293 Papaver somniferum HOM05D003226 ORTHO05D005723 1.9e-10 72.0 304 28.0
CARHR037400 Cardamine hirsuta HOM05D003226 ORTHO05D005723 2.4e-10 71.6 149 37.6
CANSAT64G2675 Cannabis sativa HOM05D003226 ORTHO05D005723 9.2e-10 69.7 140 38.6
Cpa.g.sc140.54 Carica papaya HOM05D003226 ORTHO05D005723 1.6e-09 68.9 51 68.6
AUR62029891 Chenopodium quinoa HOM05D003226 ORTHO05D005723 2.7e-09 68.2 263 29.3
Eucgr.I01943 Eucalyptus grandis HOM05D003226 ORTHO05D005723 2.7e-09 68.2 113 43.4
AUR62039793 Chenopodium quinoa HOM05D003226 ORTHO05D005723 6.0e-09 67.0 248 29.8
PSO170G5698 Papaver somniferum HOM05D003226 ORTHO05D005723 6.0e-09 67.0 304 28.3
Aqoxy5G00799 Aquilegia oxysepala HOM05D003226 ORTHO05D005723 5.1e-08 63.9 239 28.9
Zm00001eb291710 Zea mays HOM05D003226 ORTHO05D005723 8.6e-08 63.2 51 60.8
AUR62034416 Chenopodium quinoa HOM05D003226 ORTHO05D005723 1.1e-07 62.8 304 29.6
TPR.G36529 Trifolium pratense HOM05D003226 ORTHO05D005723 1.1e-07 62.8 112 39.3
ATR0605G313 Amborella trichopoda HOM05D003226 ORTHO05D005723 1.9e-07 62.0 63 55.6
QL12p008948 Quercus lobata HOM05D003226 ORTHO05D000594 3.3e-07 61.2 86 48.8
AagrBONN_evm.TU.Sc2ySwM_228.4924 Anthoceros agrestis HOM05D003226 ORTHO05D038364 4.3e-07 60.8 79 45.6
BcaC06g33656 Brassica carinata HOM05D003226 ORTHO05D005723 5.6e-07 60.5 141 37.6
C07p37860 Brassica napus HOM05D003226 ORTHO05D005723 7.3e-07 60.1 142 37.3
BolC7t44308H Brassica oleracea HOM05D003226 ORTHO05D005723 7.3e-07 60.1 142 37.3
Mapoly0189s0011 Marchantia polymorpha HOM05D003226 ORTHO05D005723 7.3e-07 60.1 102 36.3
unitig_899.g15524 Utricularia gibba HOM05D003226 ORTHO05D005723 9.5e-07 59.7 292 27.1
Medtr7g091430 Medicago truncatula HOM05D003226 ORTHO05D005723 2.1e-06 58.5 83 42.2


User provided reference genes

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