Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05092 Vaccinium macrocarpon HOM05D005002 ORTHO05D006016 3.4e-71 271.6 138 100.0
Actinidia03570 Actinidia chinensis HOM05D005002 ORTHO05D006016 1.1e-64 250.0 138 92.8
Rhsim07G0172200 Rhododendron simsii HOM05D001416 ORTHO05D005885 7.7e-63 243.8 138 92.8
Duzib168G1293 Durio zibethinus HOM05D005002 ORTHO05D006016 1.1e-61 240.0 138 85.5
CSS0035568 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 3.2e-61 238.4 138 87.7
CSS0022428 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 4.2e-61 238.0 138 87.0
Thecc.09G010700 Theobroma cacao HOM05D005002 ORTHO05D006016 4.2e-61 238.0 138 86.2
Gohir.A05G062833 Gossypium hirsutum HOM05D005002 ORTHO05D006016 7.2e-61 237.3 138 84.1
Gohir.A05G062900 Gossypium hirsutum HOM05D005002 ORTHO05D006016 7.2e-61 237.3 138 84.1
Gohir.D05G065400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 7.2e-61 237.3 138 84.1
Gorai.009G066200 Gossypium raimondii HOM05D005002 ORTHO05D006016 7.2e-61 237.3 138 84.1
Gohir.A07G034400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.2e-60 236.5 138 84.1
Gohir.D07G038000 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.2e-60 236.5 138 84.1
Gorai.001G039800 Gossypium raimondii HOM05D005002 ORTHO05D006016 1.2e-60 236.5 138 84.1
TAR622G0454 Trochodendron aralioides HOM05D005002 ORTHO05D006016 3.6e-60 235.0 138 85.5
Dinv03972 Davidia involucrata HOM05D005002 ORTHO05D006016 4.7e-60 234.6 138 86.2
Glyma.18G054400 Glycine max HOM05D005002 ORTHO05D006016 4.7e-60 234.6 138 85.5
QL01p029339 Quercus lobata HOM05D005002 ORTHO05D006016 6.1e-60 234.2 136 84.6
RcHm_v2.0_Chr6g0269591 Rosa chinensis HOM05D005002 ORTHO05D006016 6.1e-60 234.2 143 86.0
CAN.G566.59 Capsicum annuum HOM05D005002 ORTHO05D006016 1.0e-59 233.4 137 84.7
Phvul.008G002400 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 1.0e-59 233.4 138 85.5
Dinv03977 Davidia involucrata HOM05D005002 ORTHO05D006016 1.4e-59 233.0 138 84.8
Prupe.1G399400 Prunus persica HOM05D005002 ORTHO05D006016 1.4e-59 233.0 145 84.8
Glyma.11G160400 Glycine max HOM05D005002 ORTHO05D006016 2.3e-59 232.3 138 84.1
ClCG08G013890 Citrullus lanatus HOM05D005002 ORTHO05D006016 3.0e-59 231.9 138 84.1
Sed0003546 Sechium edule HOM05D005002 ORTHO05D006016 3.0e-59 231.9 138 83.3
EL10Ac2g02432 Beta vulgaris HOM05D005002 ORTHO05D006016 3.9e-59 231.5 135 84.4
CSS0010222 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 3.9e-59 231.5 138 86.2
Lj1g0025268 Lotus japonicus HOM05D005002 ORTHO05D006016 3.9e-59 231.5 136 86.0
PGR044G1228 Punica granatum HOM05D005002 ORTHO05D006016 3.9e-59 231.5 130 87.7
GSVIVG01023467001 Vitis vinifera HOM05D005002 ORTHO05D006016 3.9e-59 231.5 138 84.1
Nitab4.5_0001110g0170 Nicotiana tabacum HOM05D005002 ORTHO05D006016 6.7e-59 230.7 134 85.1
VMungo1383G3578 Vigna mungo HOM05D005002 ORTHO05D006016 6.7e-59 230.7 138 84.1
Lalb_Chr08g0234011 Lupinus albus HOM05D005002 ORTHO05D006016 8.8e-59 230.3 138 84.1
Manes.03G005700 Manihot esculenta HOM05D005002 ORTHO05D006016 8.8e-59 230.3 137 82.5
TWI34G0825 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 8.8e-59 230.3 140 85.0
GSVIVG01023464001 Vitis vinifera HOM05D005002 ORTHO05D006016 8.8e-59 230.3 138 82.6
VMungo1383G2539 Vigna mungo HOM05D005002 ORTHO05D006016 1.5e-58 229.6 138 84.8
CANSAT25G2804 Cannabis sativa HOM05D005002 ORTHO05D006016 2.6e-58 228.8 138 81.9
Peaxi162Scf00459g00833 Petunia axillaris HOM05D005002 ORTHO05D006016 2.6e-58 228.8 134 84.3
FvH4_2g11240 Fragaria vesca HOM05D005002 ORTHO05D006016 3.3e-58 228.4 146 82.2
Oeu008768.2 Olea europaea HOM05D005002 ORTHO05D006016 3.3e-58 228.4 136 83.1
Solyc12g096470.2 Solanum lycopersicum HOM05D005002 ORTHO05D006016 7.4e-58 227.3 137 82.5
Sopen12g032300 Solanum pennellii HOM05D005002 ORTHO05D006016 7.4e-58 227.3 137 82.5
PGSC0003DMG400029278 Solanum tuberosum HOM05D005002 ORTHO05D006016 7.4e-58 227.3 137 82.5
Ciclev10009813m.g Citrus clementina HOM05D005002 ORTHO05D006016 1.3e-57 226.5 145 80.7
Sed0020410 Sechium edule HOM05D005002 ORTHO05D006016 1.3e-57 226.5 138 81.2
MD08G1049200 Malus domestica HOM05D005002 ORTHO05D006016 1.7e-57 226.1 138 82.6
Medtr7g080740 Medicago truncatula HOM05D005002 ORTHO05D006016 2.2e-57 225.7 141 81.6
Cc00_g22050 Coffea canephora HOM05D005002 ORTHO05D006016 1.1e-56 223.4 130 85.4
AL7G20310 Arabidopsis lyrata HOM05D005002 ORTHO05D006016 1.4e-56 223.0 138 81.9
Eucgr.B03202 Eucalyptus grandis HOM05D005002 ORTHO05D006016 1.4e-56 223.0 133 82.0
Sp7g29520 Schrenkiella parvula HOM05D005002 ORTHO05D006016 1.4e-56 223.0 138 81.9
AT4G31720 Arabidopsis thaliana HOM05D005002 ORTHO05D006016 1.8e-56 222.6 138 81.2
BcaC09g51961 Brassica carinata HOM05D005002 ORTHO05D006016 4.1e-56 221.5 138 80.4
C01p07220 Brassica napus HOM05D005002 ORTHO05D006016 4.1e-56 221.5 138 80.4
BolC1t00713H Brassica oleracea HOM05D005002 ORTHO05D006016 4.1e-56 221.5 138 80.4
BcaNung05179 Brassica carinata HOM05D005002 ORTHO05D006016 5.3e-56 221.1 138 80.4
A01p06560 Brassica napus HOM05D005002 ORTHO05D006016 5.3e-56 221.1 138 80.4
BraA01t00615Z Brassica rapa HOM05D005002 ORTHO05D006016 5.3e-56 221.1 138 80.4
arahy.Tifrunner.gnm1.ann1.1V29TX Arachis hypogaea HOM05D005002 ORTHO05D006016 7.0e-56 220.7 138 81.2
Nn3g17630 Nelumbo nucifera HOM05D005002 ORTHO05D006016 9.1e-56 220.3 139 81.3
Lalb_Chr10g0091021 Lupinus albus HOM05D005002 ORTHO05D006016 1.2e-55 219.9 139 81.3
QL02p017669 Quercus lobata HOM05D005002 ORTHO05D006016 1.2e-55 219.9 136 80.1
BraA08t33811Z Brassica rapa HOM05D005002 ORTHO05D006016 1.5e-55 219.5 138 80.4
TWI63G0754 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 1.5e-55 219.5 165 72.1
FAN24G1669 Fragaria x ananassa HOM05D005002 ORTHO05D006016 2.0e-55 219.2 159 74.8
Carub.0007s0884 Capsella rubella HOM05D005002 ORTHO05D006016 3.5e-55 218.4 138 79.0
Migut.A00405 Erythranthe guttata HOM05D005002 ORTHO05D006016 3.5e-55 218.4 136 81.6
Psat0s2083g0280 Pisum sativum HOM05D005002 ORTHO05D006016 3.5e-55 218.4 141 77.3
THA.LOC104819944 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 4.5e-55 218.0 138 79.0
Thhalv10026546m.g Eutrema salsugineum HOM05D005002 ORTHO05D006016 5.9e-55 217.6 138 79.0
Aa31LG2G18620 Aethionema arabicum HOM05D005002 ORTHO05D006016 7.7e-55 217.2 138 80.4
TPR.G12644 Trifolium pratense HOM05D005002 ORTHO05D006016 1.0e-54 216.9 143 79.0
TPR.G15628 Trifolium pratense HOM05D005002 ORTHO05D006016 1.0e-54 216.9 145 77.9
THA.LOC104803866 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 1.7e-54 216.1 138 79.0
arahy.Tifrunner.gnm1.ann1.JDP7FN Arachis hypogaea HOM05D005002 ORTHO05D006016 2.9e-54 215.3 145 77.9
A08p18490 Brassica napus HOM05D005002 ORTHO05D006016 2.9e-54 215.3 138 78.3
HanXRQChr14g0453401 Helianthus annuus HOM05D005002 ORTHO05D006016 6.5e-54 214.2 138 75.4
BcaB03g12714 Brassica carinata HOM05D005002 ORTHO05D006016 8.5e-54 213.8 138 79.0
HanXRQChr07g0195931 Helianthus annuus HOM05D005002 ORTHO05D006016 1.1e-53 213.4 138 75.4
Sc23g0006270 Simmondsia chinensis HOM05D005002 ORTHO05D006016 2.5e-53 212.2 128 82.8
PSO782G1729 Papaver somniferum HOM05D005002 ORTHO05D006016 5.5e-53 211.1 136 80.1
MSTRG.25811 Avicennia marina HOM05D005002 ORTHO05D006016 1.2e-52 209.9 136 77.2
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 1.6e-52 209.5 136 75.7
ECA238G2697 Erigeron canadensis HOM05D005002 ORTHO05D006016 2.1e-52 209.1 141 73.8
PSO478G2205 Papaver somniferum HOM05D005002 ORTHO05D006016 2.1e-52 209.1 136 79.4
Potri.018G013300 Populus trichocarpa HOM05D005002 ORTHO05D006016 2.1e-52 209.1 124 83.9
RcHm_v2.0_Chr2g0161651 Rosa chinensis HOM05D005002 ORTHO05D006016 2.7e-52 208.8 127 83.5
DCAR_020711 Daucus carota HOM05D004285 ORTHO05D006016 4.7e-52 208.0 130 80.0
Lsat_1_v5_gn_6_32161 Lactuca sativa HOM05D005002 ORTHO05D006016 4.7e-52 208.0 138 72.5
Sabra18G0017200 Salix brachista HOM05D005002 ORTHO05D006016 4.7e-52 208.0 124 83.1
DCAR_020712 Daucus carota HOM05D005002 ORTHO05D006016 1.8e-51 206.1 129 79.8
Aqoxy7G00066 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 2.3e-51 205.7 124 83.9
Cfa017847 Carpinus fangiana HOM05D005002 ORTHO05D006016 6.7e-51 204.1 138 75.4
Actinidia14152 Actinidia chinensis HOM05D005002 ORTHO05D006016 1.1e-50 203.4 110 93.6
CDE04G1191 Ceratophyllum demersum HOM05D005002 ORTHO05D006016 2.6e-50 202.2 132 75.8
BcaC01g01070 Brassica carinata HOM05D005002 ORTHO05D006016 7.4e-50 200.7 126 81.0
C03p87650 Brassica napus HOM05D005002 ORTHO05D006016 7.4e-50 200.7 126 81.0
ATR0691G047 Amborella trichopoda HOM05D005002 ORTHO05D006016 9.7e-50 200.3 132 74.2
HPP92_000490 Vanilla planifolia HOM05D005002 ORTHO05D006016 1.3e-49 199.9 132 75.0
MD15G1045700 Malus domestica HOM05D005002 ORTHO05D006016 1.7e-49 199.5 138 76.1
Os09g0431500 Oryza sativa ssp. japonica HOM05D005002 ORTHO05D006016 9.1e-48 193.7 129 72.9
CSS0031521 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 2.0e-47 192.6 110 87.3
MELO3C011321.2 Cucumis melo HOM05D005002 ORTHO05D006016 1.3e-46 189.9 110 85.5
Hma1.2p1_0192F.1_g083460 Hydrangea macrophylla HOM05D005002 ORTHO05D006016 2.2e-46 189.1 117 82.9
AUR62020301 Chenopodium quinoa HOM05D005002 ORTHO05D006016 2.9e-46 188.7 112 84.8
AUR62037698 Chenopodium quinoa HOM05D005002 ORTHO05D006016 5.0e-46 188.0 114 83.3
Haze_18362 Corylus avellana HOM05D005002 ORTHO05D006016 1.9e-45 186.0 111 82.9
Zm00001eb313590 Zea mays HOM05D005002 ORTHO05D006016 1.9e-45 186.0 138 68.1
Ah.09g224730 Amaranthus hybridus HOM05D005002 ORTHO05D006016 1.6e-44 183.0 146 70.5
FAN15G1411 Fragaria x ananassa HOM05D000348 ORTHO05D000244 1.6e-44 183.0 107 86.0
Ca_06528_v3 Cicer arietinum L. HOM05D005002 ORTHO05D006016 5.2e-43 177.9 113 82.3
BcaC09g51955 Brassica carinata HOM05D005002 ORTHO05D006016 1.5e-42 176.4 128 71.1
BolC3t21083H Brassica oleracea HOM05D000888 ORTHO05D000740 2.2e-41 172.6 110 79.1
SalBow4G2991 Salvia bowleyana HOM05D005002 ORTHO05D006016 6.3e-41 171.0 108 80.6
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 2.7e-39 165.6 112 73.2
BcaC09g51957 Brassica carinata HOM05D005002 ORTHO05D006016 1.2e-36 156.8 141 62.4
Mapoly0011s0105 Marchantia polymorpha HOM05D005002 ORTHO05D006016 2.1e-36 156.0 119 68.9
unitig_93.g30701 Utricularia gibba HOM05D005002 ORTHO05D006016 1.0e-35 153.7 136 60.3
Lju41A41T35 Lonicera japonica HOM05D005002 ORTHO05D006016 5.2e-35 151.4 185 49.7
COL.COLO4_21113 Corchorus olitorius HOM05D005002 ORTHO05D006016 1.5e-34 149.8 97 74.2
Pp3c6_16040 Physcomitrium patens HOM05D005002 ORTHO05D006016 2.0e-34 149.4 116 62.9
Duzib168G1591 Durio zibethinus HOM05D005002 ORTHO05D006016 2.2e-33 146.0 85 85.9
COL.COLO4_19003 Corchorus olitorius HOM05D005002 ORTHO05D006016 8.3e-33 144.1 86 82.6
RcHm_v2.0_Chr2g0161711 Rosa chinensis HOM05D005002 ORTHO05D006016 2.7e-31 139.0 85 83.5
Duzib187G1493 Durio zibethinus HOM05D005002 ORTHO05D006016 4.2e-29 131.7 87 77.0
MSTRG.9875 Avicennia marina HOM05D005002 ORTHO05D006016 1.2e-28 130.2 85 80.0
CARHR239610 Cardamine hirsuta HOM05D005002 ORTHO05D006016 1.6e-28 129.8 85 80.0
Aqoxy7G00833 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 1.4e-27 126.7 73 83.6
MBI15_g18374_MAGBIO Magnolia biondii HOM05D005002 ORTHO05D006016 1.4e-27 126.7 133 57.1
Duzib150G1286 Durio zibethinus HOM05D005002 ORTHO05D006016 1.2e-26 123.6 100 66.0
CBR_g30254 Chara braunii HOM05D005002 ORTHO05D006016 2.6e-26 122.5 105 56.2
SMO141G0065 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 1.4e-24 116.7 121 55.4
SGA_v2.0_scaffold193G40677 Striga asiatica HOM05D005002 ORTHO05D006016 5.4e-24 114.8 97 61.9
Nitab4.5_0000668g0030 Nicotiana tabacum HOM05D005002 ORTHO05D006016 2.3e-22 109.4 65 83.1
SMO356G0735 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 1.5e-21 106.7 115 47.8
Lalb_Chr08g0233981 Lupinus albus HOM05D005002 ORTHO05D006016 1.9e-21 106.3 66 80.3
Lalb_Chr08g0233961 Lupinus albus HOM05D005002 ORTHO05D006016 2.8e-20 102.4 53 90.6
CiPaw.15G092700 Carya illinoinensis HOM05D005002 ORTHO05D006016 6.8e-19 97.8 53 84.9
FAN27G2219 Fragaria x ananassa HOM05D005002 ORTHO05D006016 2.6e-18 95.9 50 94.0
COL.COLO4_27723 Corchorus olitorius HOM05D005002 ORTHO05D006016 2.9e-17 92.4 52 80.8
FAN20G1660 Fragaria x ananassa HOM05D005002 ORTHO05D006016 4.9e-17 91.7 61 78.7
QL12p013723 Quercus lobata HOM05D005002 ORTHO05D006016 8.3e-17 90.9 61 75.4
Phvul.009G222000 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 1.9e-16 89.7 77 61.0
PRCOL_00006189 Prasinoderma coloniale HOM05D005002 ORTHO05D006016 2.7e-15 85.9 126 36.5
SEGI_02469 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 3.5e-15 85.5 63 69.8
EL10Ac5g10893 Beta vulgaris HOM05D005002 ORTHO05D006016 3.0e-14 82.4 45 84.4
MCO01G145 Micromonas commoda HOM05D005002 ORTHO05D006016 1.1e-13 80.5 108 42.6
Actinidia25736 Actinidia chinensis HOM05D005002 ORTHO05D006016 4.7e-12 75.1 158 37.3
Cre16.g657000 Chlamydomonas reinhardtii HOM05D005002 ORTHO05D006016 3.1e-11 72.4 126 33.3
HanXRQChr14g0435251 Helianthus annuus HOM05D005002 ORTHO05D006016 4.6e-07 58.5 55 60.0
SEGI_34318 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 6.0e-07 58.2 41 68.3


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