Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05068 Vaccinium macrocarpon HOM05D006377 ORTHO05D008001 1.2e-118 429.9 215 100.0
Rhsim07G0175800 Rhododendron simsii HOM05D006377 ORTHO05D008001 1.0e-85 320.5 211 80.6
CSS0017897 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 6.1e-75 284.6 216 73.6
CSS0039444 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 9.8e-73 277.3 216 72.2
Prupe.6G338600 Prunus persica HOM05D006377 ORTHO05D008001 2.0e-70 269.6 219 67.6
MD12G1236300 Malus domestica HOM05D006377 ORTHO05D008001 1.1e-68 263.8 215 67.0
Actinidia05760 Actinidia chinensis HOM05D006377 ORTHO05D008001 5.5e-68 261.5 216 69.0
TAR365G0273 Trochodendron aralioides HOM05D006377 ORTHO05D008001 1.0e-66 257.3 215 68.4
Haze_04319 Corylus avellana HOM05D006377 ORTHO05D008001 1.4e-66 256.9 215 63.3
PGSC0003DMG400022504 Solanum tuberosum HOM05D006377 ORTHO05D008001 6.8e-66 254.6 217 65.9
Sopen01g041500 Solanum pennellii HOM05D006377 ORTHO05D008001 4.4e-65 251.9 217 65.4
RcHm_v2.0_Chr3g0452211 Rosa chinensis HOM05D006377 ORTHO05D008001 5.7e-65 251.5 215 65.1
FvH4_6g03680 Fragaria vesca HOM05D006377 ORTHO05D008001 1.3e-64 250.4 216 65.3
FAN05G1987 Fragaria x ananassa HOM05D006377 ORTHO05D008001 1.3e-64 250.4 215 63.7
Cfa006472 Carpinus fangiana HOM05D006377 ORTHO05D008001 2.2e-64 249.6 215 61.4
Cc02_g31420 Coffea canephora HOM05D006377 ORTHO05D008001 2.2e-64 249.6 218 61.9
Nitab4.5_0002361g0100 Nicotiana tabacum HOM05D006377 ORTHO05D008001 2.2e-64 249.6 216 64.4
FAN14G3144 Fragaria x ananassa HOM05D006377 ORTHO05D008001 2.8e-64 249.2 216 64.8
Nn2g12517 Nelumbo nucifera HOM05D006377 ORTHO05D008001 3.7e-64 248.8 216 65.3
CAN.G134.174 Capsicum annuum HOM05D006377 ORTHO05D008001 4.9e-64 248.4 212 64.6
FAN05G4075 Fragaria x ananassa HOM05D006377 ORTHO05D008001 4.9e-64 248.4 222 62.2
Nitab4.5_0002840g0030 Nicotiana tabacum HOM05D006377 ORTHO05D008001 4.9e-64 248.4 215 63.7
QL03p023258 Quercus lobata HOM05D006377 ORTHO05D008001 6.3e-64 248.1 214 63.1
MD04G1219300 Malus domestica HOM05D006377 ORTHO05D008001 1.8e-63 246.5 222 63.1
Hma1.2p1_0332F.1_g127770 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 7.0e-63 244.6 210 63.8
QL03p023964 Quercus lobata HOM05D006377 ORTHO05D008001 9.2e-63 244.2 214 62.1
Solyc01g097910.2 Solanum lycopersicum HOM05D006377 ORTHO05D008001 9.2e-63 244.2 217 64.1
EL10Ac4g09192 Beta vulgaris HOM05D006377 ORTHO05D008001 3.5e-62 242.3 217 64.1
CiPaw.08G178700 Carya illinoinensis HOM05D006377 ORTHO05D008001 3.5e-62 242.3 216 61.6
FAN09G4008 Fragaria x ananassa HOM05D006377 ORTHO05D008001 2.3e-61 239.6 209 64.1
Sc20g0000200 Simmondsia chinensis HOM05D006377 ORTHO05D008001 1.1e-60 237.3 215 61.9
THA.LOC104805815 Tarenaya hassleriana HOM05D006377 ORTHO05D008001 1.1e-60 237.3 218 58.7
Oeu012478.1 Olea europaea HOM05D006377 ORTHO05D008001 4.3e-60 235.3 218 61.9
Ah.06g192660 Amaranthus hybridus HOM05D006377 ORTHO05D008001 7.3e-60 234.6 216 62.0
CsaV3_2G004360 Cucumis sativus L. HOM05D006377 ORTHO05D008001 2.1e-59 233.0 213 60.1
Dinv11572 Davidia involucrata HOM05D006377 ORTHO05D008001 2.1e-59 233.0 199 63.8
Oeu027050.1 Olea europaea HOM05D006377 ORTHO05D008001 2.1e-59 233.0 218 59.6
Aqoxy2G02484 Aquilegia oxysepala HOM05D006377 ORTHO05D008001 8.0e-59 231.1 220 60.9
ClCG02G016370 Citrullus lanatus HOM05D006377 ORTHO05D008001 3.0e-58 229.2 213 59.6
MELO3C004358.2 Cucumis melo HOM05D006377 ORTHO05D008001 3.0e-58 229.2 212 59.9
Manes.08G127500 Manihot esculenta HOM05D006377 ORTHO05D008001 3.0e-58 229.2 222 59.9
PSO210G5336 Papaver somniferum HOM05D006377 ORTHO05D008001 3.0e-58 229.2 215 59.1
TWI36G1766 Tripterygium wilfordii HOM05D006377 ORTHO05D008001 3.0e-58 229.2 215 61.4
Thecc.05G289700 Theobroma cacao HOM05D006377 ORTHO05D008001 4.0e-58 228.8 216 63.0
Lsat_1_v5_gn_2_67840 Lactuca sativa HOM05D006377 ORTHO05D008001 6.8e-58 228.0 201 61.7
PGR004G2824 Punica granatum HOM05D006377 ORTHO05D008001 6.8e-58 228.0 215 58.6
Actinidia30919 Actinidia chinensis HOM05D006377 ORTHO05D008001 8.9e-58 227.6 186 71.5
Duzib177G1058 Durio zibethinus HOM05D006377 ORTHO05D008001 1.2e-57 227.3 220 62.7
Potri.005G049000 Populus trichocarpa HOM05D006377 ORTHO05D008001 1.5e-57 226.9 215 59.5
Sed0019582 Sechium edule HOM05D006377 ORTHO05D008001 1.5e-57 226.9 208 60.6
ECA238G1597 Erigeron canadensis HOM05D006377 ORTHO05D008001 3.4e-57 225.7 205 60.0
Peaxi162Scf00404g00014 Petunia axillaris HOM05D006377 ORTHO05D008001 4.4e-57 225.3 210 61.0
MSTRG.3650 Avicennia marina HOM05D006377 ORTHO05D008001 9.8e-57 224.2 216 58.8
Gorai.007G285800 Gossypium raimondii HOM05D006377 ORTHO05D008001 9.8e-57 224.2 220 59.5
Ciclev10002532m.g Citrus clementina HOM05D006377 ORTHO05D008001 1.7e-56 223.4 217 59.4
Gohir.D11G265800 Gossypium hirsutum HOM05D006377 ORTHO05D008001 1.7e-56 223.4 220 59.5
Potri.013G035700 Populus trichocarpa HOM05D006377 ORTHO05D008001 2.2e-56 223.0 215 57.7
HanXRQChr04g0094091 Helianthus annuus HOM05D006377 ORTHO05D008001 6.4e-56 221.5 211 59.7
Gohir.A11G256100 Gossypium hirsutum HOM05D006377 ORTHO05D008001 4.1e-55 218.8 222 58.1
MBI19_g37073_MAGBIO Magnolia biondii HOM05D006377 ORTHO05D008001 4.1e-55 218.8 215 60.5
Lj7P475T32 Lonicera japonica HOM05D006377 ORTHO05D008001 2.0e-54 216.5 216 59.3
SGA_v2.0_scaffold35G13993 Striga asiatica HOM05D006377 ORTHO05D008001 2.0e-54 216.5 166 65.7
Medtr7g114590 Medicago truncatula HOM05D006377 ORTHO05D008001 1.0e-53 214.2 207 56.5
unitig_0.g1675 Utricularia gibba HOM05D006377 ORTHO05D008001 1.3e-53 213.8 159 66.7
Zm00001eb140200 Zea mays HOM05D006377 ORTHO05D008001 1.7e-53 213.4 155 67.7
PSO761G0064 Papaver somniferum HOM05D006377 ORTHO05D008001 3.0e-53 212.6 215 56.7
Carub.0002s0934 Capsella rubella HOM05D006377 ORTHO05D008001 3.9e-53 212.2 198 59.1
Lj1g0014721 Lotus japonicus HOM05D006377 ORTHO05D008001 5.0e-53 211.8 216 56.9
Os08g0323400 Oryza sativa ssp. japonica HOM05D006377 ORTHO05D008001 1.1e-52 210.7 166 65.7
SalBow5G2979 Salvia bowleyana HOM05D006377 ORTHO05D008001 3.3e-52 209.1 215 55.8
TPR.G7004 Trifolium pratense HOM05D006377 ORTHO05D008001 3.3e-52 209.1 212 54.2
Atru.chr2.718 Acer truncatum HOM05D006377 ORTHO05D008001 4.3e-52 208.8 153 71.9
Glyma.03G245100 Glycine max HOM05D006377 ORTHO05D008001 4.3e-52 208.8 205 55.6
Phvul.006G099300 Phaseolus vulgaris HOM05D006377 ORTHO05D008001 5.6e-52 208.4 216 55.6
CDE01G0680 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 1.2e-51 207.2 211 57.3
Zm00001eb061720 Zea mays HOM05D006377 ORTHO05D008001 1.2e-51 207.2 111 83.8
CARHR055600 Cardamine hirsuta HOM05D006377 ORTHO05D008001 1.6e-51 206.8 203 55.7
AUR62000968 Chenopodium quinoa HOM05D006377 ORTHO05D008001 2.1e-51 206.5 203 58.1
arahy.Tifrunner.gnm1.ann1.VW98FE Arachis hypogaea HOM05D006377 ORTHO05D008001 2.8e-51 206.1 121 81.0
FAN02G4534 Fragaria x ananassa HOM05D006377 ORTHO05D008001 2.8e-51 206.1 155 67.7
Ca_09403_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 3.6e-51 205.7 122 78.7
Ca_30164_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 3.6e-51 205.7 122 78.7
Sabra05G0044300 Salix brachista HOM05D006377 ORTHO05D008001 3.6e-51 205.7 215 56.7
CDE12G0044 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 4.7e-51 205.3 212 57.5
Aa31LG2G12300 Aethionema arabicum HOM05D006377 ORTHO05D008001 6.2e-51 204.9 138 72.5
Cpa.g.sc264.18 Carica papaya HOM05D006377 ORTHO05D008001 1.0e-50 204.1 113 83.2
Zm00001eb061690 Zea mays HOM05D006377 ORTHO05D008001 1.0e-50 204.1 111 82.9
A04p07500 Brassica napus HOM05D006377 ORTHO05D008001 1.4e-50 203.8 139 72.7
C04p41160 Brassica napus HOM05D006377 ORTHO05D008001 1.4e-50 203.8 139 72.7
BolC4t25698H Brassica oleracea HOM05D006377 ORTHO05D008001 1.4e-50 203.8 139 72.7
BraA04t16445Z Brassica rapa HOM05D006377 ORTHO05D008001 1.4e-50 203.8 139 72.7
Migut.E01572 Erythranthe guttata HOM05D006377 ORTHO05D008001 1.4e-50 203.8 172 60.5
Lalb_Chr15g0076921 Lupinus albus HOM05D006377 ORTHO05D008001 1.8e-50 203.4 205 58.0
AL1G64910 Arabidopsis lyrata HOM05D006377 ORTHO05D008001 4.0e-50 202.2 209 56.5
Thhalv10023702m.g Eutrema salsugineum HOM05D006377 ORTHO05D008001 5.2e-50 201.8 114 80.7
VMungo0540G1412 Vigna mungo HOM05D006377 ORTHO05D008001 5.2e-50 201.8 215 55.8
BcaB02g08603 Brassica carinata HOM05D006377 ORTHO05D008001 8.9e-50 201.1 193 59.1
AT1G54500 Arabidopsis thaliana HOM05D006377 ORTHO05D008001 1.2e-49 200.7 209 55.5
BcaC02g09303 Brassica carinata HOM05D006377 ORTHO05D008001 1.5e-49 200.3 192 56.2
SpUn0001_0720 Schrenkiella parvula HOM05D006377 ORTHO05D008001 5.8e-49 198.4 192 54.7
ATR0796G227 Amborella trichopoda HOM05D006377 ORTHO05D008001 9.8e-49 197.6 214 53.7
Zm00001eb061700 Zea mays HOM05D006377 ORTHO05D008001 9.8e-49 197.6 155 63.9
HPP92_001948 Vanilla planifolia HOM05D006377 ORTHO05D008001 4.9e-48 195.3 213 53.5
Zm00001eb061670 Zea mays HOM05D006377 ORTHO05D008001 1.9e-47 193.4 140 67.9
Psat5g039080 Pisum sativum HOM05D006377 ORTHO05D008001 5.4e-47 191.8 191 57.1
Manes.09G157000 Manihot esculenta HOM05D006377 ORTHO05D008001 1.0e-45 187.6 187 59.4
Zm00001eb061710 Zea mays HOM05D006377 ORTHO05D008001 1.0e-45 187.6 155 62.6
Sabra13G0035000 Salix brachista HOM05D006377 ORTHO05D008001 1.1e-44 184.1 175 58.9
Duzib128G0229 Durio zibethinus HOM05D006377 ORTHO05D008001 3.3e-44 182.6 190 57.9
SEGI_38373 Sequoiadendron giganteum HOM05D006377 ORTHO05D008001 5.6e-44 181.8 215 50.2
AagrBONN_evm.TU.Sc2ySwM_344.5347 Anthoceros agrestis HOM05D006377 ORTHO05D008001 7.3e-44 181.4 188 52.7
AUR62004997 Chenopodium quinoa HOM05D006377 ORTHO05D008001 9.5e-44 181.0 185 56.8
AagrBONN_evm.TU.Sc2ySwM_368.50 Anthoceros agrestis HOM05D006377 ORTHO05D008001 1.6e-43 180.3 188 53.7
Pp3c1_22450 Physcomitrium patens HOM05D006377 ORTHO05D008001 1.5e-41 173.7 122 68.9
Pp3c2_13970 Physcomitrium patens HOM05D006377 ORTHO05D008001 2.2e-40 169.9 112 72.3
Mapoly0032s0089 Marchantia polymorpha HOM05D006377 ORTHO05D008001 6.4e-40 168.3 166 54.8
AagrBONN_evm.TU.Sc2ySwM_368.3396 Anthoceros agrestis HOM05D006377 ORTHO05D008001 1.4e-39 167.2 126 61.1
CBR_g55374 Chara braunii HOM05D006377 ORTHO05D008001 7.1e-39 164.9 113 65.5
Hma1.2p1_0332F.1_g127760 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 7.1e-39 164.9 160 56.2
SMO137G0026 Selaginella moellendorffii HOM05D006377 ORTHO05D008001 3.5e-38 162.5 108 67.6
unitig_748.g7013 Utricularia gibba HOM05D000757 ORTHO05D000622 2.3e-37 159.8 127 61.4
DCAR_009137 Daucus carota HOM05D006377 ORTHO05D008001 1.1e-36 157.5 188 50.5
MCO15G508 Micromonas commoda HOM05D006377 ORTHO05D008001 5.6e-28 128.6 113 53.1
Cre07.g315150 Chlamydomonas reinhardtii HOM05D006377 ORTHO05D008001 1.6e-27 127.1 129 47.3
Zm00001eb061680 Zea mays HOM05D006377 ORTHO05D008001 3.4e-25 119.4 121 49.6
PRCOL_00004455 Prasinoderma coloniale HOM05D006377 ORTHO05D008001 2.7e-22 109.8 127 45.7
Hma1.2p1_0332F.1_g127740 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 1.2e-14 84.3 98 46.9
Actinidia36920 Actinidia chinensis HOM05D006377 ORTHO05D057244 5.3e-10 68.9 158 41.8


User provided reference genes

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