Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 0.0e+00 1229.2 627 100.0
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 1.4e-260 902.9 670 73.0
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 2.6e-227 792.3 627 69.1
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 1.9e-217 759.6 568 71.7
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.0e-191 674.1 597 60.8
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 2.0e-187 659.8 537 66.9
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 2.0e-182 643.3 596 60.6
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 2.7e-179 632.9 632 56.0
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 3.3e-177 625.9 635 56.1
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 4.0e-175 619.0 634 55.7
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 7.8e-171 604.7 636 54.7
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 3.0e-170 602.8 632 55.1
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 1.1e-169 600.9 615 54.5
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 7.3e-169 598.2 629 54.5
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 4.0e-167 592.4 607 54.7
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 6.8e-167 591.7 618 55.3
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 1.2e-166 590.9 624 53.8
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 1.2e-166 590.9 631 54.0
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 6.4e-165 585.1 608 55.4
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 9.2e-164 581.3 621 53.6
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 4.6e-163 578.9 621 53.8
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 1.3e-162 577.4 594 53.7
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 1.3e-162 577.4 616 51.0
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 2.3e-162 576.6 622 53.5
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 3.9e-162 575.9 598 52.5
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 1.5e-161 573.9 614 51.6
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 7.3e-161 571.6 623 53.6
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 1.2e-160 570.9 602 52.8
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 5.2e-159 565.5 596 54.0
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 8.9e-159 564.7 593 54.0
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 3.4e-158 562.8 563 55.8
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 9.9e-158 561.2 598 53.5
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 1.3e-157 560.8 591 54.1
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 2.2e-157 560.1 596 53.9
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 1.1e-156 557.8 622 51.9
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 1.9e-156 557.0 626 52.6
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 2.4e-156 556.6 510 60.4
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 4.1e-156 555.8 601 52.2
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 4.1e-156 555.8 621 53.0
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 5.4e-156 555.4 627 52.8
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 4.6e-155 552.4 639 51.5
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 1.7e-154 550.4 627 49.8
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 1.7e-154 550.4 630 52.7
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 1.5e-153 547.4 598 51.8
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 2.5e-153 546.6 601 51.6
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 3.3e-153 546.2 631 51.8
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 4.3e-153 545.8 625 50.9
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 5.6e-153 545.4 628 51.9
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 2.8e-152 543.1 628 51.1
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 3.6e-152 542.7 605 51.2
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 1.7e-149 533.9 599 51.4
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 2.2e-149 533.5 520 55.8
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 2.9e-149 533.1 633 50.2
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 1.2e-147 527.7 624 49.4
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 1.6e-147 527.3 595 50.9
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 2.7e-147 526.6 664 48.2
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 3.5e-147 526.2 591 51.6
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 1.3e-144 517.7 603 49.1
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 1.1e-143 514.6 596 50.8
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 3.1e-143 513.1 543 53.8
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 5.4e-140 502.3 598 48.7
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 9.3e-140 501.5 603 48.8
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 9.3e-140 501.5 465 58.9
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 1.6e-139 500.7 603 48.8
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 6.0e-139 498.8 612 49.5
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 1.3e-138 497.7 599 48.7
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 6.6e-138 495.4 601 49.3
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 9.6e-137 491.5 592 49.7
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 1.6e-136 490.7 590 49.2
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 1.1e-135 488.0 612 47.2
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 1.4e-135 487.6 623 46.1
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 6.9e-135 485.3 601 47.8
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 9.0e-135 485.0 597 48.9
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 9.0e-135 485.0 597 48.9
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 1.5e-134 484.2 592 49.2
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 1.5e-134 484.2 609 47.8
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 1.5e-134 484.2 601 49.3
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 2.0e-134 483.8 592 48.3
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 2.6e-134 483.4 602 47.7
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 9.9e-134 481.5 486 57.2
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 2.2e-133 480.3 625 46.7
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 4.9e-133 479.2 563 50.3
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 7.1e-132 475.3 609 47.1
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 6.0e-131 472.2 602 47.2
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 6.0e-131 472.2 592 48.0
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 7.9e-131 471.9 612 46.6
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 4.3e-129 466.1 624 46.2
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 1.8e-127 460.7 597 46.2
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 2.0e-126 457.2 612 45.6
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.1e-124 451.4 626 47.0
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 2.5e-124 450.3 622 45.2
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 1.3e-122 444.5 616 45.6
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 5.7e-121 439.1 436 57.6
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 2.1e-115 420.6 300 71.7
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 1.9e-113 414.1 385 59.2
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 1.6e-107 394.4 445 50.1
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 5.1e-106 389.4 628 39.8
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 4.1e-103 379.8 478 47.9
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 3.8e-101 373.2 598 39.0
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 3.0e-98 363.6 305 61.6
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 1.3e-96 358.2 600 37.8
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 3.7e-96 356.7 442 47.5
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 2.3e-90 337.4 324 56.8
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 2.8e-80 303.9 257 62.6
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 8.0e-75 285.8 259 56.4
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 5.7e-73 279.6 299 49.8
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 1.6e-67 261.5 497 34.4
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 5.9e-62 243.0 278 53.2
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 4.3e-60 236.9 243 54.3
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 7.8e-54 216.1 257 50.6
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 1.5e-49 201.8 168 61.3
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 6.6e-45 186.4 299 36.1
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 4.3e-44 183.7 271 43.5
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 1.1e-42 179.1 513 26.7
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 5.2e-42 176.8 208 46.6
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.2e-38 165.6 199 49.2
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.7e-37 161.8 269 39.8
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 9.6e-36 156.0 271 38.7
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 1.2e-33 149.1 243 40.7
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 1.4e-31 142.1 106 70.8
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 1.4e-26 125.6 165 40.0
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 2.4e-26 124.8 231 35.5
Cpa.g.sc26.239 Carica papaya HOM05D005865 ORTHO05D006867 5.6e-20 103.6 56 82.1
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 7.4e-20 103.2 208 38.5
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 9.6e-20 102.8 310 26.5
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 4.0e-18 97.4 73 64.4
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 5.3e-18 97.1 174 36.2
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 1.5e-17 95.5 167 40.1
MELO3C035121.2 Cucumis melo HOM05D005865 ORTHO05D000044 2.4e-15 88.2 65 67.7
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 2.4e-10 71.6 64 59.4
MELO3C031410.2 Cucumis melo HOM05D005865 ORTHO05D006867 9.0e-10 69.7 111 36.9
Lj2A91G56 Lonicera japonica HOM05D005865 ORTHO05D006867 1.0e-08 66.2 38 78.9
Actinidia29777 Actinidia chinensis HOM05D005865 ORTHO05D006867 3.5e-06 57.8 70 55.7
Hma1.2p1_1100F.1_g257150 Hydrangea macrophylla HOM05D000065 ORTHO05D003979 6.0e-06 57.0 57 59.6


User provided reference genes

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