Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro04368 Vaccinium macrocarpon HOM05D005168 ORTHO05D006358 5.1e-66 254.2 123 100.0
CSS0038486 Camellia sinensis var. sinensis HOM05D005168 ORTHO05D006358 4.5e-46 188.0 120 72.5
CSS0004439 Camellia sinensis var. sinensis HOM05D005168 ORTHO05D006358 7.1e-44 180.6 122 71.3
Actinidia37940 Actinidia chinensis HOM05D005168 ORTHO05D006358 2.1e-43 179.1 120 72.5
MSTRG.22344 Avicennia marina HOM05D005168 ORTHO05D006358 1.5e-38 162.9 123 60.2
Rhsim07G0250400 Rhododendron simsii HOM05D005168 ORTHO05D006358 3.4e-38 161.8 120 66.7
SGA_v2.0_scaffold19G08553 Striga asiatica HOM05D005168 ORTHO05D006358 9.9e-38 160.2 120 60.8
SGA_v2.0_scaffold47G17500 Striga asiatica HOM05D005168 ORTHO05D006358 1.3e-37 159.8 120 60.8
SalBow8G1113 Salvia bowleyana HOM05D005168 ORTHO05D006358 6.4e-37 157.5 123 56.1
Solyc04g054510.4 Solanum lycopersicum HOM05D005168 ORTHO05D006358 8.4e-37 157.1 120 60.8
PGSC0003DMG400022038 Solanum tuberosum HOM05D005168 ORTHO05D006358 8.4e-37 157.1 120 60.8
Nitab4.5_0003251g0060 Nicotiana tabacum HOM05D005168 ORTHO05D006358 3.2e-36 155.2 120 59.2
Nitab4.5_0000337g0010 Nicotiana tabacum HOM05D005168 ORTHO05D006358 4.2e-36 154.8 120 59.2
Cc10_g01450 Coffea canephora HOM05D005168 ORTHO05D006358 7.1e-36 154.1 119 58.8
Hma1.2p1_0733F.1_g210170 Hydrangea macrophylla HOM05D005168 ORTHO05D006358 3.5e-35 151.8 120 60.0
CAN.G727.4 Capsicum annuum HOM05D005168 ORTHO05D006358 6.0e-35 151.0 120 57.5
Peaxi162Scf00553g00216 Petunia axillaris HOM05D005168 ORTHO05D006358 1.3e-34 149.8 120 56.7
Migut.N03173 Erythranthe guttata HOM05D005168 ORTHO05D006358 1.8e-34 149.4 123 54.5
DCAR_015742 Daucus carota HOM05D005168 ORTHO05D006358 3.3e-33 145.2 120 54.2
PSO541G4324 Papaver somniferum HOM05D005168 ORTHO05D006358 1.5e-30 136.3 125 57.6
PSO675G5410 Papaver somniferum HOM05D005168 ORTHO05D006358 1.5e-30 136.3 125 57.6
Sopen04g024330 Solanum pennellii HOM05D005168 ORTHO05D006358 4.5e-30 134.8 109 58.7
unitig_22.g6797 Utricularia gibba HOM05D005168 ORTHO05D006358 1.7e-29 132.9 123 49.6
GSVIVG01009945001 Vitis vinifera HOM05D005168 ORTHO05D006358 1.1e-28 130.2 125 51.2
Nn3g19859 Nelumbo nucifera HOM05D005168 ORTHO05D006358 1.9e-28 129.4 124 53.2
TWI56G1449 Tripterygium wilfordii HOM05D005168 ORTHO05D006358 3.2e-28 128.6 118 50.8
Lsat_1_v5_gn_2_14120 Lactuca sativa HOM05D005168 ORTHO05D006358 4.2e-28 128.3 118 50.8
Dinv40488 Davidia involucrata HOM05D005168 ORTHO05D006358 5.5e-28 127.9 105 57.1
ECA238G1857 Erigeron canadensis HOM05D005168 ORTHO05D006358 5.5e-28 127.9 118 50.0
QL01p031168 Quercus lobata HOM05D005168 ORTHO05D006358 7.1e-28 127.5 118 51.7
Manes.14G063600 Manihot esculenta HOM05D005168 ORTHO05D006358 6.0e-27 124.4 112 52.7
TAR622G0958 Trochodendron aralioides HOM05D005168 ORTHO05D006358 6.0e-27 124.4 125 52.0
CDE11G0347 Ceratophyllum demersum HOM05D005168 ORTHO05D006358 1.3e-26 123.2 127 50.4
CiPaw.07G147200 Carya illinoinensis HOM05D005168 ORTHO05D006358 2.3e-26 122.5 119 50.4
Medtr3g102420 Medicago truncatula HOM05D005168 ORTHO05D006358 2.3e-26 122.5 118 50.8
Psat5g045240 Pisum sativum HOM05D005168 ORTHO05D006358 2.3e-26 122.5 118 50.0
Sc15g0004820 Simmondsia chinensis HOM05D005168 ORTHO05D006358 2.3e-26 122.5 130 49.2
Haze_22662 Corylus avellana HOM05D005168 ORTHO05D006358 3.9e-26 121.7 118 50.8
HanXRQChr04g0101211 Helianthus annuus HOM05D005168 ORTHO05D006358 3.9e-26 121.7 118 48.3
Ca_00384_v3 Cicer arietinum L. HOM05D005168 ORTHO05D006358 5.1e-26 121.3 118 49.2
Haze_17776 Corylus avellana HOM05D005168 ORTHO05D006358 8.7e-26 120.6 118 50.0
CANSAT11G0916 Cannabis sativa HOM05D005168 ORTHO05D006358 1.1e-25 120.2 118 50.8
Lj1g0018211 Lotus japonicus HOM05D005168 ORTHO05D006358 1.1e-25 120.2 118 48.3
Cfa012889 Carpinus fangiana HOM05D005168 ORTHO05D006358 1.5e-25 119.8 118 50.0
Atru.chr1.3654 Acer truncatum HOM05D005168 ORTHO05D006358 7.4e-25 117.5 118 45.8
Lalb_Chr11g0067001 Lupinus albus HOM05D005168 ORTHO05D006358 7.4e-25 117.5 121 47.9
Aa31LG4G6030 Aethionema arabicum HOM05D005168 ORTHO05D006358 1.3e-24 116.7 120 48.3
arahy.Tifrunner.gnm1.ann1.TKX6L5 Arachis hypogaea HOM05D005168 ORTHO05D006358 2.2e-24 115.9 124 49.2
Cpa.g.sc58.102 Carica papaya HOM05D005168 ORTHO05D006358 2.2e-24 115.9 120 48.3
Prupe.6G147400 Prunus persica HOM05D005168 ORTHO05D006358 2.2e-24 115.9 119 50.4
THA.LOC104825467 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 2.2e-24 115.9 111 51.4
THA.LOC104825468 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 2.2e-24 115.9 111 50.5
Sed0007604 Sechium edule HOM05D005168 ORTHO05D006358 3.7e-24 115.2 118 47.5
Potri.013G015000 Populus trichocarpa HOM05D005168 ORTHO05D006358 4.8e-24 114.8 113 47.8
MELO3C011355.2 Cucumis melo HOM05D005168 ORTHO05D006358 6.3e-24 114.4 118 48.3
CsaV3_2G024260 Cucumis sativus L. HOM05D005168 ORTHO05D006358 6.3e-24 114.4 118 47.5
Phvul.001G175600 Phaseolus vulgaris HOM05D005168 ORTHO05D006358 6.3e-24 114.4 113 49.6
THA.LOC104811420 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 8.2e-24 114.0 111 49.5
arahy.Tifrunner.gnm1.ann1.GU7A1M Arachis hypogaea HOM05D005168 ORTHO05D006358 1.1e-23 113.6 124 48.4
MD08G1010500 Malus domestica HOM05D005168 ORTHO05D006358 1.1e-23 113.6 119 47.1
Os03g0711700 Oryza sativa ssp. japonica HOM05D005168 ORTHO05D006358 1.1e-23 113.6 121 47.9
Eucgr.C01258 Eucalyptus grandis HOM05D005168 ORTHO05D006358 1.4e-23 113.2 114 50.9
EL10Ac1g02165 Beta vulgaris HOM05D005168 ORTHO05D006358 1.8e-23 112.8 130 45.4
VMungo1080G1160 Vigna mungo HOM05D005168 ORTHO05D006358 1.8e-23 112.8 121 48.8
Hund09202 Selenicereus undatus HOM05D005168 ORTHO05D006358 3.1e-23 112.1 127 47.2
Eucgr.H00960 Eucalyptus grandis HOM05D005168 ORTHO05D006358 4.1e-23 111.7 114 50.9
Glyma.03G178900 Glycine max HOM05D005168 ORTHO05D006358 5.3e-23 111.3 113 47.8
PGR031G0142 Punica granatum HOM05D005168 ORTHO05D006358 5.3e-23 111.3 118 47.5
Carub.0005s0380 Capsella rubella HOM05D005168 ORTHO05D006358 9.0e-23 110.5 118 47.5
Thecc.08G047200 Theobroma cacao HOM05D005168 ORTHO05D006358 9.0e-23 110.5 118 50.0
BcaB03g14336 Brassica carinata HOM05D005168 ORTHO05D006358 1.5e-22 109.8 111 49.5
BcaB03g14344 Brassica carinata HOM05D005168 ORTHO05D006358 1.5e-22 109.8 111 49.5
A07p16030 Brassica napus HOM05D005168 ORTHO05D006358 1.5e-22 109.8 111 49.5
C07p23400 Brassica napus HOM05D005168 ORTHO05D006358 1.5e-22 109.8 111 49.5
BolC7t42872H Brassica oleracea HOM05D005168 ORTHO05D006358 1.5e-22 109.8 111 49.5
BraA07t29331Z Brassica rapa HOM05D005168 ORTHO05D006358 1.5e-22 109.8 111 49.5
BcaB07g32021 Brassica carinata HOM05D005168 ORTHO05D006358 2.6e-22 109.0 114 47.4
Duzib093G1099 Durio zibethinus HOM05D005168 ORTHO05D006358 2.6e-22 109.0 119 51.3
Mapoly0043s0107 Marchantia polymorpha HOM05D005168 ORTHO05D006358 3.4e-22 108.6 121 47.1
AL5G14600 Arabidopsis lyrata HOM05D005168 ORTHO05D006358 5.9e-22 107.8 111 48.6
Sp1g17830 Schrenkiella parvula HOM05D005168 ORTHO05D006358 5.9e-22 107.8 111 48.6
AT3G25940 Arabidopsis thaliana HOM05D005168 ORTHO05D006358 7.6e-22 107.5 114 47.4
Aqoxy2G01931 Aquilegia oxysepala HOM05D005168 ORTHO05D006358 1.0e-21 107.1 127 46.5
BraA06t24725Z Brassica rapa HOM05D005168 ORTHO05D006358 1.0e-21 107.1 111 47.7
CARHR020540 Cardamine hirsuta HOM05D005168 ORTHO05D006358 1.0e-21 107.1 114 47.4
BcaC05g25900 Brassica carinata HOM05D005168 ORTHO05D006358 1.3e-21 106.7 111 47.7
C05p18550 Brassica napus HOM05D005168 ORTHO05D006358 1.3e-21 106.7 111 47.7
BolC5t30566H Brassica oleracea HOM05D005168 ORTHO05D006358 1.3e-21 106.7 111 47.7
Gohir.A06G002600 Gossypium hirsutum HOM05D005168 ORTHO05D006358 2.2e-21 105.9 118 50.0
Gohir.D06G005600 Gossypium hirsutum HOM05D005168 ORTHO05D006358 2.2e-21 105.9 118 50.0
Gorai.010G002800 Gossypium raimondii HOM05D005168 ORTHO05D006358 2.2e-21 105.9 118 50.0
SEGI_04309 Sequoiadendron giganteum HOM05D005168 ORTHO05D006358 2.9e-21 105.5 124 42.7
Thhalv10009132m.g Eutrema salsugineum HOM05D005168 ORTHO05D006358 3.8e-21 105.1 111 47.7
CARHR146930 Cardamine hirsuta HOM05D005168 ORTHO05D006358 5.0e-21 104.8 111 48.6
Thhalv10019327m.g Eutrema salsugineum HOM05D005168 ORTHO05D006358 8.5e-21 104.0 111 47.7
A06p16200 Brassica napus HOM05D005168 ORTHO05D006358 1.4e-20 103.2 111 46.8
Ciclev10003775m.g Citrus clementina HOM05D005168 ORTHO05D006358 3.2e-20 102.1 115 43.5
FvH4_1g24780 Fragaria vesca HOM05D005168 ORTHO05D006358 3.2e-20 102.1 124 44.4
FAN23G3095 Fragaria x ananassa HOM05D005168 ORTHO05D006358 5.5e-20 101.3 124 43.5
AagrBONN_evm.TU.Sc2ySwM_368.3393 Anthoceros agrestis HOM05D005168 ORTHO05D006358 1.2e-19 100.1 121 43.0
Zm00001eb054840 Zea mays HOM05D005168 ORTHO05D006358 6.1e-19 97.8 113 44.2
Pp3c24_7070 Physcomitrium patens HOM05D005168 ORTHO05D006358 2.3e-18 95.9 161 34.8
Lj4A21T59 Lonicera japonica HOM05D005168 ORTHO05D006358 1.1e-15 87.0 68 57.4
RcHm_v2.0_Chr2g0124111 Rosa chinensis HOM05D005168 ORTHO05D006358 2.0e-14 82.8 124 37.1
Cre01.g018000 Chlamydomonas reinhardtii HOM05D005168 ORTHO05D006358 2.6e-14 82.4 121 35.5
Sabra13G0016900 Salix brachista HOM05D005168 ORTHO05D006358 3.4e-14 82.0 92 44.6
SMO351G0141 Selaginella moellendorffii HOM05D005168 ORTHO05D006358 4.5e-14 81.6 115 37.4
Eucgr.L01842 Eucalyptus grandis HOM05D005168 ORTHO05D006358 1.3e-13 80.1 62 58.1
Sabra13G0012900 Salix brachista HOM05D005168 ORTHO05D006358 1.7e-13 79.7 90 44.4
Aqoxy6G02286 Aquilegia oxysepala HOM05D005168 ORTHO05D006358 3.8e-13 78.6 117 38.5
ATR0057G015 Amborella trichopoda HOM05D005168 ORTHO05D006358 4.2e-12 75.1 95 41.1
HPP92_028162 Vanilla planifolia HOM05D005168 ORTHO05D006358 1.6e-11 73.2 92 44.6
MCO15G369 Micromonas commoda HOM05D005168 ORTHO05D006358 3.6e-11 72.0 130 35.4
Glyma.19G179600 Glycine max HOM05D005168 ORTHO05D006358 1.5e-09 66.6 59 49.2
TPR.G9182 Trifolium pratense HOM05D005168 ORTHO05D006358 2.6e-09 65.9 82 36.6
AT1G20065 Arabidopsis thaliana HOM05D005168 ORTHO05D006358 5.7e-09 64.7 56 50.0
Ca_15982_v3 Cicer arietinum L. HOM05D005168 ORTHO05D006358 9.7e-09 63.9 51 52.9
MD15G1010600 Malus domestica HOM05D005168 ORTHO05D006358 9.7e-09 63.9 52 51.9
CDE09G0329 Ceratophyllum demersum HOM05D005168 ORTHO05D006358 3.7e-08 62.0 86 46.5
AL1G32870 Arabidopsis lyrata HOM05D005168 ORTHO05D006358 6.3e-08 61.2 53 49.1
CBR_g23850 Chara braunii HOM05D005168 ORTHO05D006358 6.3e-08 61.2 88 38.6
FAN26G0870 Fragaria x ananassa HOM05D005168 ORTHO05D006358 8.2e-08 60.8 70 47.1
Eucgr.F02832 Eucalyptus grandis HOM05D005168 ORTHO05D006358 1.4e-07 60.1 82 39.0
Lsat_1_v5_gn_2_14240 Lactuca sativa HOM05D005168 ORTHO05D006358 4.1e-07 58.5 43 53.5
ECA238G0944 Erigeron canadensis HOM05D005168 ORTHO05D006358 1.2e-06 57.0 70 37.1
AUR62041475 Chenopodium quinoa HOM05D005168 ORTHO05D006358 2.0e-06 56.2 85 42.4
ClCG08G014170 Citrullus lanatus HOM05D005168 ORTHO05D006358 2.6e-06 55.8 38 60.5
AUR62040557 Chenopodium quinoa HOM05D005168 ORTHO05D006358 3.4e-06 55.5 64 48.4
THA.LOC109116732 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 4.5e-06 55.1 45 53.3


User provided reference genes

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