Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 0.0e+00 1241.9 613 100.0
Cc04_g09090 Coffea canephora HOM05D006175 ORTHO05D008081 3.9e-207 725.3 609 62.9
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 6.6e-207 724.5 631 60.7
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 5.6e-206 721.5 610 61.8
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 6.2e-205 718.0 604 62.1
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 6.4e-202 708.0 616 60.4
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 1.1e-201 707.2 611 61.9
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 7.1e-201 704.5 603 61.2
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 7.8e-200 701.0 611 59.6
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 1.0e-199 700.7 605 60.8
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 2.3e-199 699.5 605 60.7
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 3.9e-199 698.7 612 60.3
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 4.3e-198 695.3 604 63.1
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 8.1e-197 691.0 608 59.9
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 8.1e-197 691.0 605 60.2
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 1.4e-196 690.3 603 59.9
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 3.1e-196 689.1 609 59.8
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 1.5e-195 686.8 604 58.9
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 3.4e-195 685.6 618 58.6
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 3.4e-195 685.6 597 60.0
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 4.4e-195 685.3 599 59.9
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 5.8e-195 684.9 599 60.1
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 9.9e-195 684.1 607 58.5
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 2.2e-194 682.9 606 60.2
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 4.9e-194 681.8 607 59.8
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 8.4e-194 681.0 599 59.4
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 2.4e-193 679.5 607 59.8
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 4.1e-193 678.7 606 60.1
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 4.1e-193 678.7 600 59.8
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 1.6e-192 676.8 605 58.7
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 2.1e-192 676.4 606 59.7
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 6.0e-192 674.9 607 58.6
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 6.0e-192 674.9 607 59.3
ClCG04G012690 Citrullus lanatus HOM05D006175 ORTHO05D008081 1.7e-191 673.3 607 57.5
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 8.6e-191 671.0 628 56.4
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 1.1e-190 670.6 608 58.7
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 1.9e-190 669.8 607 58.6
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 4.3e-190 668.7 615 58.0
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 3.6e-189 665.6 607 58.2
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 1.1e-188 664.1 608 58.7
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 1.5e-187 660.2 607 60.5
Sed0010232 Sechium edule HOM05D006175 ORTHO05D008081 2.0e-187 659.8 612 57.4
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 5.8e-187 658.3 603 58.2
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 5.8e-187 658.3 604 59.3
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 9.9e-187 657.5 609 58.1
Zm00001eb037700 Zea mays HOM05D006175 ORTHO05D008081 1.7e-186 656.8 609 56.3
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 8.4e-186 654.4 619 57.0
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 1.4e-185 653.7 608 58.1
SGA_v2.0_scaffold90G27775 Striga asiatica HOM05D006175 ORTHO05D008081 1.9e-185 653.3 613 56.4
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 1.0e-183 647.5 571 61.1
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 2.3e-183 646.4 603 57.7
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 8.7e-183 644.4 603 56.6
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 2.1e-181 639.8 609 56.3
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 1.1e-180 637.5 610 56.2
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 4.0e-180 635.6 604 55.8
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 5.3e-180 635.2 609 56.3
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 1.7e-178 630.2 606 55.4
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 3.8e-178 629.0 602 55.8
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 2.4e-177 626.3 606 55.1
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 4.2e-177 625.5 606 55.1
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 5.4e-177 625.2 605 54.9
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 1.2e-176 624.0 606 55.0
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 1.6e-176 623.6 566 58.8
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 1.3e-175 620.5 606 54.8
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 3.9e-175 619.0 617 55.9
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 5.1e-175 618.6 611 54.2
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 6.6e-175 618.2 584 55.5
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 1.1e-174 617.5 607 53.7
Lj5A165T85 Lonicera japonica HOM05D006175 ORTHO05D008081 1.9e-174 616.7 451 68.3
vmacro01251 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 9.6e-174 614.4 689 53.6
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 3.6e-173 612.5 607 54.4
BcaB01g03058 Brassica carinata HOM05D006175 ORTHO05D008081 4.8e-173 612.1 606 54.6
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 6.2e-173 611.7 599 53.3
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 1.4e-172 610.5 607 53.7
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 4.0e-172 609.0 609 54.5
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 7.9e-168 594.7 601 53.2
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 3.3e-166 589.3 603 53.1
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 2.0e-163 580.1 496 59.3
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 3.0e-151 539.7 629 49.0
Nitab4.5_0001180g0190 Nicotiana tabacum HOM05D006175 ORTHO05D008081 6.7e-151 538.5 606 51.5
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 9.7e-150 534.6 600 47.5
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 3.1e-148 529.6 454 54.8
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 7.7e-147 525.0 608 48.0
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 3.2e-145 519.6 606 49.2
COL.COLO4_27108 Corchorus olitorius HOM05D006175 ORTHO05D008081 1.6e-144 517.3 587 49.2
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 2.3e-143 513.5 606 43.9
Rhsim06G0000100 Rhododendron simsii HOM05D006175 ORTHO05D008081 1.0e-138 498.0 317 75.4
HanXRQChr05g0129731 Helianthus annuus HOM05D006175 ORTHO05D008081 4.4e-134 482.6 353 67.7
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 5.7e-134 482.3 600 43.8
Prupe.5G240100 Prunus persica HOM05D006175 ORTHO05D008081 9.7e-134 481.5 603 48.4
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 4.8e-133 479.2 607 44.8
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 9.1e-132 474.9 622 45.0
Lalb_Chr22g0353691 Lupinus albus HOM05D006175 ORTHO05D008081 1.5e-129 467.6 317 69.4
HPP92_019162 Vanilla planifolia HOM05D006175 ORTHO05D008081 2.7e-128 463.4 611 43.7
HanXRQChr11g0338981 Helianthus annuus HOM05D006175 ORTHO05D008081 1.7e-122 444.1 323 67.8
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 5.5e-113 412.5 601 39.8
FAN18G1603 Fragaria x ananassa HOM05D006175 ORTHO05D008081 3.1e-108 396.7 245 76.3
unitig_0.g1094 Utricularia gibba HOM05D006175 ORTHO05D008081 1.9e-97 360.9 614 38.6
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 1.3e-93 348.2 380 49.7
Glyma.09G169100 Glycine max HOM05D006175 ORTHO05D008081 4.6e-91 339.7 308 57.1
Psat6g072600 Pisum sativum HOM05D006175 ORTHO05D008081 1.7e-90 337.8 631 37.4
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 6.8e-79 299.3 585 31.5
AL4G26880 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 2.2e-77 294.3 409 42.8
Cre10.g424200 Chlamydomonas reinhardtii HOM05D006175 ORTHO05D008081 1.8e-63 248.1 497 32.6
PRCOL_00003367 Prasinoderma coloniale HOM05D006175 ORTHO05D008081 6.0e-59 233.0 486 34.2
VMungo1215G0683 Vigna mungo HOM05D006175 ORTHO05D008081 6.0e-59 233.0 197 57.9
AUR62043421 Chenopodium quinoa HOM05D006175 ORTHO05D008081 3.6e-56 223.8 171 63.2
Lalb_Chr22g0353701 Lupinus albus HOM05D006175 ORTHO05D008081 2.4e-52 211.1 279 48.0
HanXRQChr05g0129721 Helianthus annuus HOM05D006175 ORTHO05D008081 4.0e-47 193.7 250 48.8
CDE04G1443 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 2.9e-45 187.6 103 79.6
HanXRQChr11g0338971 Helianthus annuus HOM05D006175 ORTHO05D008081 6.5e-45 186.4 250 48.0
FAN04G2119 Fragaria x ananassa HOM05D006175 ORTHO05D008081 2.8e-40 171.0 265 43.0
FAN13G0892 Fragaria x ananassa HOM05D006175 ORTHO05D008081 2.8e-40 171.0 249 43.4
FAN08G2730 Fragaria x ananassa HOM05D006175 ORTHO05D008081 3.7e-40 170.6 249 43.4
CDE04G2185 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 8.7e-34 149.4 85 77.6
Cfa025039 Carpinus fangiana HOM05D006175 ORTHO05D008081 6.7e-18 96.7 405 24.4
CSS0024377 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D043346 5.7e-17 93.6 50 88.0
Ca_23674_v3 Cicer arietinum L. HOM05D006175 ORTHO05D008081 7.4e-17 93.2 145 38.6
Thecc.04G242900 Theobroma cacao HOM05D006175 ORTHO05D008081 8.5e-13 79.7 43 79.1
CDE04G3312 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 9.7e-09 66.2 53 56.6
BcaC05g28616 Brassica carinata HOM05D002760 ORTHO05D001361 2.8e-08 64.7 31 83.9
A07p06810 Brassica napus HOM05D002760 ORTHO05D003169 2.8e-08 64.7 31 83.9
BNapus_Darmor_BZH_scaffold_38p01460 Brassica napus HOM05D002760 ORTHO05D003169 2.8e-08 64.7 31 83.9
BraA03t12607Z Brassica rapa HOM05D002760 ORTHO05D003169 2.8e-08 64.7 31 83.9
C05p47240 Brassica napus HOM05D002760 ORTHO05D003169 8.2e-08 63.2 31 80.6
Actinidia31560 Actinidia chinensis HOM05D006175 ORTHO05D008081 1.8e-07 62.0 53 67.9
Thecc.10G092900 Theobroma cacao HOM05D006175 ORTHO05D008952 1.2e-06 59.3 166 30.1
TPR.G28017 Trifolium pratense HOM05D006175 ORTHO05D008081 2.7e-06 58.2 61 54.1


User provided reference genes

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