Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03355 Vaccinium macrocarpon HOM05D005567 ORTHO05D005651 5.0e-44 180.6 86 100.0
vmacro03436 Vaccinium macrocarpon HOM05D005567 ORTHO05D005651 1.7e-39 165.6 78 100.0
Rhsim13G0117000 Rhododendron simsii HOM05D005567 ORTHO05D005651 1.6e-34 149.1 82 87.8
Dinv32216 Davidia involucrata HOM05D005567 ORTHO05D005651 3.9e-33 144.4 79 86.1
Hma1.2p1_1794F.1_g302670 Hydrangea macrophylla HOM05D005567 ORTHO05D005651 1.5e-32 142.5 81 82.7
Rhsim11G0051300 Rhododendron simsii HOM05D005567 ORTHO05D005651 9.7e-32 139.8 70 92.9
Oeu040093.1 Olea europaea HOM05D005567 ORTHO05D005651 7.0e-30 133.7 79 81.0
Oeu054932.1 Olea europaea HOM05D005567 ORTHO05D005651 1.6e-29 132.5 79 81.0
Actinidia13448 Actinidia chinensis HOM05D005567 ORTHO05D005651 2.6e-29 131.7 80 80.0
Ciclev10025380m.g Citrus clementina HOM05D005567 ORTHO05D005651 2.6e-29 131.7 78 80.8
Sed0009662 Sechium edule HOM05D005567 ORTHO05D005651 3.5e-29 131.3 74 77.0
GSVIVG01021538001 Vitis vinifera HOM05D005567 ORTHO05D005651 3.5e-29 131.3 78 78.2
Oeu008947.1 Olea europaea HOM05D005567 ORTHO05D005651 4.5e-29 131.0 79 79.7
PGR031G2076 Punica granatum HOM05D005567 ORTHO05D005651 2.2e-28 128.6 78 74.4
CAN.G160.8 Capsicum annuum HOM05D005567 ORTHO05D005651 3.8e-28 127.9 78 70.5
Nn3g20454 Nelumbo nucifera HOM05D005567 ORTHO05D005651 3.8e-28 127.9 74 78.4
COL.COLO4_31019 Corchorus olitorius HOM05D005567 ORTHO05D005651 6.5e-28 127.1 72 76.4
Manes.15G124500 Manihot esculenta HOM05D005567 ORTHO05D005651 6.5e-28 127.1 78 69.2
PGR035G0006 Punica granatum HOM05D005567 ORTHO05D005651 6.5e-28 127.1 73 78.1
MD05G1280500 Malus domestica HOM05D005567 ORTHO05D005651 8.5e-28 126.7 76 69.7
Prupe.4G084900 Prunus persica HOM05D005567 ORTHO05D005651 8.5e-28 126.7 78 74.4
MBI18_g03007_MAGBIO Magnolia biondii HOM05D005567 ORTHO05D005651 1.5e-27 125.9 76 73.7
MELO3C007111.2 Cucumis melo HOM05D005567 ORTHO05D005651 1.9e-27 125.6 73 75.3
SHI38399 Sapria himalayana HOM05D005567 ORTHO05D005651 1.9e-27 125.6 69 76.8
Nitab4.5_0003551g0060 Nicotiana tabacum HOM05D005567 ORTHO05D005651 2.5e-27 125.2 77 70.1
Duzib192G0463 Durio zibethinus HOM05D005567 ORTHO05D005651 3.2e-27 124.8 72 73.6
Atru.chr10.1112 Acer truncatum HOM05D005567 ORTHO05D005651 5.5e-27 124.0 78 74.4
CiPaw.09G120700 Carya illinoinensis HOM05D005567 ORTHO05D005651 5.5e-27 124.0 78 74.4
CsaV3_6G051950 Cucumis sativus L. HOM05D005567 ORTHO05D005651 5.5e-27 124.0 73 74.0
SGA_v2.0_scaffold1G00200 Striga asiatica HOM05D005567 ORTHO05D005651 5.5e-27 124.0 72 75.0
Nitab4.5_0002611g0120 Nicotiana tabacum HOM05D005567 ORTHO05D005651 7.2e-27 123.6 77 68.8
TWI73G0487 Tripterygium wilfordii HOM05D005567 ORTHO05D005651 7.2e-27 123.6 76 73.7
Potri.004G158000 Populus trichocarpa HOM05D005567 ORTHO05D005651 1.6e-26 122.5 80 71.2
Solyc07g005890.3 Solanum lycopersicum HOM05D005567 ORTHO05D005651 1.6e-26 122.5 73 69.9
Sopen07g002020 Solanum pennellii HOM05D005567 ORTHO05D005651 1.6e-26 122.5 73 69.9
PGSC0003DMG401011204 Solanum tuberosum HOM05D005567 ORTHO05D005651 1.6e-26 122.5 73 69.9
TAR626G1087 Trochodendron aralioides HOM05D005567 ORTHO05D005651 1.6e-26 122.5 72 75.0
Cfa000907 Carpinus fangiana HOM05D005567 ORTHO05D005651 2.1e-26 122.1 74 77.0
MSTRG.16261 Avicennia marina HOM05D005567 ORTHO05D005651 3.6e-26 121.3 72 73.6
Eucgr.E02430 Eucalyptus grandis HOM05D005567 ORTHO05D005651 4.7e-26 120.9 71 73.2
Lsat_1_v5_gn_3_121441 Lactuca sativa HOM05D005567 ORTHO05D005651 6.1e-26 120.6 80 72.5
Cc11_g02850 Coffea canephora HOM05D005567 ORTHO05D005651 8.0e-26 120.2 69 75.4
Sc05g0006010 Simmondsia chinensis HOM05D005567 ORTHO05D005651 1.0e-25 119.8 71 74.6
PGSC0003DMG400022975 Solanum tuberosum HOM05D005567 ORTHO05D005651 1.0e-25 119.8 73 68.5
Gohir.A05G146500 Gossypium hirsutum HOM05D005567 ORTHO05D005651 2.3e-25 118.6 72 72.2
Gohir.D05G149000 Gossypium hirsutum HOM05D005567 ORTHO05D005651 2.3e-25 118.6 72 72.2
Gorai.009G153000 Gossypium raimondii HOM05D005567 ORTHO05D005651 2.3e-25 118.6 72 72.2
FvH4_3g05121 Fragaria vesca HOM05D005567 ORTHO05D005651 5.2e-25 117.5 77 67.5
FAN11G3281 Fragaria x ananassa HOM05D005567 ORTHO05D005651 5.2e-25 117.5 77 67.5
QL05p055424 Quercus lobata HOM05D005567 ORTHO05D005651 6.7e-25 117.1 73 69.9
AUR62027404 Chenopodium quinoa HOM05D005567 ORTHO05D005651 8.8e-25 116.7 78 65.4
HanXRQChr13g0422501 Helianthus annuus HOM05D005567 ORTHO05D005651 8.8e-25 116.7 77 68.8
SGA_v2.0_scaffold58G20438 Striga asiatica HOM05D005567 ORTHO05D005651 8.8e-25 116.7 72 69.4
CANSAT35G1600 Cannabis sativa HOM05D005567 ORTHO05D005651 1.2e-24 116.3 80 67.5
AUR62031319 Chenopodium quinoa HOM05D005567 ORTHO05D005651 1.5e-24 115.9 78 66.7
Aqoxy5G03882 Aquilegia oxysepala HOM05D005567 ORTHO05D005651 2.6e-24 115.2 69 73.9
RcHm_v2.0_Chr5g0014641 Rosa chinensis HOM05D005567 ORTHO05D005651 3.3e-24 114.8 77 64.9
Lj4g0007029 Lotus japonicus HOM05D005567 ORTHO05D005651 9.7e-24 113.2 75 61.3
DCAR_003891 Daucus carota HOM05D005567 ORTHO05D005651 1.3e-23 112.8 77 68.8
FAN21G1630 Fragaria x ananassa HOM05D005567 ORTHO05D005651 1.3e-23 112.8 77 66.2
ClCG01G024830 Citrullus lanatus HOM05D005567 ORTHO05D005651 1.7e-23 112.5 62 80.6
FAN16G1390 Fragaria x ananassa HOM05D005567 ORTHO05D005651 1.7e-23 112.5 77 63.6
FAN25G0576 Fragaria x ananassa HOM05D005567 ORTHO05D005651 1.7e-23 112.5 77 64.9
EL10Ac8g19315 Beta vulgaris HOM05D005567 ORTHO05D005651 2.2e-23 112.1 78 62.8
HPP92_028168 Vanilla planifolia HOM05D005567 ORTHO05D005651 2.2e-23 112.1 70 67.1
arahy.Tifrunner.gnm1.ann1.EWV0WN Arachis hypogaea HOM05D005567 ORTHO05D005651 2.8e-23 111.7 78 60.3
arahy.Tifrunner.gnm1.ann1.JRZ00F Arachis hypogaea HOM05D005567 ORTHO05D005651 2.8e-23 111.7 78 60.3
Sp7g14250 Schrenkiella parvula HOM05D005567 ORTHO05D005651 2.8e-23 111.7 77 63.6
ATR0661G527 Amborella trichopoda HOM05D005567 ORTHO05D005651 3.7e-23 111.3 77 64.9
Thhalv10024904m.g Eutrema salsugineum HOM05D005567 ORTHO05D005651 3.7e-23 111.3 77 63.6
Lalb_Chr02g0156151 Lupinus albus HOM05D005567 ORTHO05D005651 4.8e-23 110.9 75 61.3
CSS0035269 Camellia sinensis var. sinensis HOM05D005567 ORTHO05D005651 8.3e-23 110.2 62 83.9
RcHm_v2.0_Chr5g0014671 Rosa chinensis HOM05D005567 ORTHO05D005651 1.8e-22 109.0 76 64.5
Aa31LG10G6270 Aethionema arabicum HOM05D002639 ORTHO05D005651 3.1e-22 108.2 77 63.6
Lj2A322G63 Lonicera japonica HOM05D005567 ORTHO05D005651 3.1e-22 108.2 100 57.0
Psat7g080400 Pisum sativum HOM05D005567 ORTHO05D005651 3.1e-22 108.2 72 62.5
Ah.14g086310 Amaranthus hybridus HOM05D005567 ORTHO05D005651 7.0e-22 107.1 78 60.3
Oeu054930.1 Olea europaea HOM05D005567 ORTHO05D005651 7.0e-22 107.1 87 62.1
THA.LOC104802575 Tarenaya hassleriana HOM05D005567 ORTHO05D005651 7.0e-22 107.1 66 69.7
Ca_18163_v3 Cicer arietinum L. HOM05D005567 ORTHO05D005651 9.1e-22 106.7 73 57.5
Medtr5g077690 Medicago truncatula HOM05D005567 ORTHO05D005651 9.1e-22 106.7 73 57.5
VMungo0251G3629 Vigna mungo HOM05D005567 ORTHO05D005651 9.1e-22 106.7 73 65.8
CARHR290380 Cardamine hirsuta HOM05D005567 ORTHO05D005651 1.2e-21 106.3 66 68.2
AT4G15850 Arabidopsis thaliana HOM05D005567 ORTHO05D005651 2.0e-21 105.5 66 66.7
ECA240G2278 Erigeron canadensis HOM05D005567 ORTHO05D005651 2.0e-21 105.5 68 70.6
AL7G39430 Arabidopsis lyrata HOM05D005567 ORTHO05D005651 2.7e-21 105.1 66 66.7
CDE11G0998 Ceratophyllum demersum HOM05D005567 ORTHO05D005651 2.7e-21 105.1 66 71.2
Carub.0007s2580 Capsella rubella HOM05D005567 ORTHO05D005651 4.5e-21 104.4 77 59.7
Migut.M00885 Erythranthe guttata HOM05D005567 ORTHO05D005651 4.5e-21 104.4 84 58.3
TPR.G21614 Trifolium pratense HOM05D002142 ORTHO05D005651 5.9e-21 104.0 73 54.8
TPR.G9554 Trifolium pratense HOM05D005567 ORTHO05D005651 5.9e-21 104.0 73 54.8
A01p21660 Brassica napus HOM05D005567 ORTHO05D005651 7.7e-21 103.6 77 58.4
BraA01t02075Z Brassica rapa HOM05D005567 ORTHO05D005651 7.7e-21 103.6 77 58.4
BcaC09g50276 Brassica carinata HOM05D005567 ORTHO05D005651 1.0e-20 103.2 76 60.5
BcaC09g50282 Brassica carinata HOM05D005567 ORTHO05D005651 1.0e-20 103.2 76 60.5
C01p27020 Brassica napus HOM05D005567 ORTHO05D005651 1.0e-20 103.2 76 60.5
BolC1t02650H Brassica oleracea HOM05D005567 ORTHO05D005651 1.0e-20 103.2 76 60.5
SEGI_23194 Sequoiadendron giganteum HOM05D005567 ORTHO05D005651 1.0e-20 103.2 76 61.8
BcaNung00240 Brassica carinata HOM05D005567 ORTHO05D005651 1.3e-20 102.8 76 60.5
Cpa.g.sc17.43 Carica papaya HOM05D005567 ORTHO05D005651 1.3e-20 102.8 67 70.1
Os02g0795900 Oryza sativa ssp. japonica HOM05D005567 ORTHO05D005651 5.0e-20 100.9 77 59.7
Phvul.002G179500 Phaseolus vulgaris HOM05D005567 ORTHO05D005651 1.9e-19 99.0 78 60.3
PSO675G8008 Papaver somniferum HOM05D005567 ORTHO05D005651 2.1e-18 95.5 80 55.0
Zm00001eb257820 Zea mays HOM05D005567 ORTHO05D005651 3.6e-18 94.7 68 63.2
PSO339G4780 Papaver somniferum HOM05D005567 ORTHO05D005651 8.0e-18 93.6 80 56.2
PSO384G1189 Papaver somniferum HOM05D005567 ORTHO05D005651 8.0e-18 93.6 80 56.2
PSO541G2802 Papaver somniferum HOM05D005567 ORTHO05D005651 8.0e-18 93.6 80 53.8
Glyma.14G115100 Glycine max HOM05D005326 ORTHO05D006734 4.0e-17 91.3 70 57.1
Glyma.08G231300 Glycine max HOM05D005567 ORTHO05D005651 6.8e-17 90.5 67 59.7
Mapoly0149s0031 Marchantia polymorpha HOM05D017422 ORTHO05D005651 2.2e-15 85.5 74 51.4
Pp3c6_13920 Physcomitrium patens HOM05D005567 ORTHO05D005651 8.3e-15 83.6 70 50.0
SMO139G0134 Selaginella moellendorffii HOM05D005567 ORTHO05D005651 8.3e-15 83.6 70 55.7
AagrBONN_evm.TU.Sc2ySwM_344.3570 Anthoceros agrestis HOM05D005567 ORTHO05D005651 1.2e-13 79.7 72 50.0
CSS0004710 Camellia sinensis var. sinensis HOM05D005567 ORTHO05D005651 5.9e-13 77.4 39 89.7
CSS0049309 Camellia sinensis var. sinensis HOM05D005567 ORTHO05D005651 5.9e-13 77.4 39 89.7
CSS0008572 Camellia sinensis var. sinensis HOM05D005567 ORTHO05D005651 2.9e-12 75.1 38 89.5
CBR_g39259 Chara braunii HOM05D000019 ORTHO05D000002 7.2e-11 70.5 68 47.1
Peaxi162Scf00401g00029 Petunia axillaris HOM05D005567 ORTHO05D005651 9.5e-11 70.1 38 81.6
Hund12175 Selenicereus undatus HOM05D005567 ORTHO05D005651 1.2e-10 69.7 38 81.6
Lj2C923G5 Lonicera japonica HOM05D005567 ORTHO05D005651 2.8e-10 68.6 31 96.8
Lj2C924T4 Lonicera japonica HOM05D005567 ORTHO05D005651 6.1e-10 67.4 31 93.5
Hund17757 Selenicereus undatus HOM05D005567 ORTHO05D005651 5.7e-08 60.8 39 64.1
Cre07.g319750 Chlamydomonas reinhardtii HOM05D005567 ORTHO05D005651 4.9e-07 57.8 69 43.5
CAN.G2122.3 Capsicum annuum HOM05D005567 ORTHO05D005651 9.2e-06 53.5 38 47.4
FAN16G0453 Fragaria x ananassa HOM05D005567 ORTHO05D005651 9.2e-06 53.5 31 71.0


User provided reference genes

Program Settings