Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02951 Vaccinium macrocarpon HOM05D000366 ORTHO05D026437 1.4e-78 296.2 144 100.0
Rhsim13G0068000 Rhododendron simsii HOM05D000366 ORTHO05D000437 1.4e-46 189.9 167 63.5
CSS0028830 Camellia sinensis var. sinensis HOM05D000366 ORTHO05D000437 1.6e-39 166.4 152 61.2
Actinidia32636 Actinidia chinensis HOM05D000366 ORTHO05D026437 2.1e-39 166.0 141 61.7
Actinidia23226 Actinidia chinensis HOM05D000366 ORTHO05D000437 8.1e-39 164.1 144 59.7
Dinv28658 Davidia involucrata HOM05D000366 ORTHO05D000437 2.0e-29 132.9 156 52.6
Dinv03095 Davidia involucrata HOM05D000366 ORTHO05D000437 9.0e-22 107.5 99 56.6
Lj1C131G7 Lonicera japonica HOM05D000366 ORTHO05D000437 2.6e-21 105.9 163 42.9
Lalb_Chr15g0082981 Lupinus albus HOM05D000366 ORTHO05D000437 9.6e-16 87.4 145 39.3
TPR.G29027 Trifolium pratense HOM05D000366 ORTHO05D000437 1.3e-15 87.0 140 42.1
Thecc.09G299000 Theobroma cacao HOM05D000366 ORTHO05D000437 4.8e-15 85.1 149 37.6
ECA236G5035 Erigeron canadensis HOM05D000366 ORTHO05D000437 6.2e-15 84.7 153 39.2
HanXRQChr09g0261771 Helianthus annuus HOM05D000366 ORTHO05D000437 6.2e-15 84.7 151 37.7
CAN.G1023.1 Capsicum annuum HOM05D000366 ORTHO05D000437 2.4e-14 82.8 145 41.4
Peaxi162Scf00540g00214 Petunia axillaris HOM05D000366 ORTHO05D000437 5.3e-14 81.6 81 54.3
Peaxi162Scf00207g00633 Petunia axillaris HOM05D000366 ORTHO05D000437 1.5e-13 80.1 80 52.5
Ca_14957_v3 Cicer arietinum L. HOM05D000366 ORTHO05D000437 2.6e-13 79.3 162 38.9
PGSC0003DMG400022079 Solanum tuberosum HOM05D000366 ORTHO05D000437 2.6e-13 79.3 99 44.4
Nitab4.5_0000719g0100 Nicotiana tabacum HOM05D000366 ORTHO05D000437 5.8e-13 78.2 149 34.2
Sopen03g019830 Solanum pennellii HOM05D000366 ORTHO05D000437 5.8e-13 78.2 145 39.3
PGSC0003DMG400016917 Solanum tuberosum HOM05D000366 ORTHO05D000437 7.6e-13 77.8 79 53.2
Lj6g0002719 Lotus japonicus HOM05D000366 ORTHO05D000437 1.7e-12 76.6 151 37.7
Solyc09g031580.3 Solanum lycopersicum HOM05D000366 ORTHO05D000437 1.7e-12 76.6 80 50.0
Sopen09g013940 Solanum pennellii HOM05D000366 ORTHO05D000437 1.7e-12 76.6 111 42.3
Nitab4.5_0000839g0030 Nicotiana tabacum HOM05D000366 ORTHO05D000437 2.2e-12 76.3 80 50.0
Nitab4.5_0001371g0040 Nicotiana tabacum HOM05D000366 ORTHO05D000437 2.2e-12 76.3 80 50.0
Hund18838 Selenicereus undatus HOM05D000366 ORTHO05D000437 2.2e-12 76.3 153 35.3
MD11G1071500 Malus domestica HOM05D000366 ORTHO05D000437 2.9e-12 75.9 143 36.4
Nitab4.5_0000684g0160 Nicotiana tabacum HOM05D000366 ORTHO05D000437 2.9e-12 75.9 149 36.9
QL01p038772 Quercus lobata HOM05D000366 ORTHO05D000437 6.4e-12 74.7 147 37.4
Solyc03g071550.3 Solanum lycopersicum HOM05D000366 ORTHO05D000437 8.4e-12 74.3 92 50.0
Atru.chr3.4178 Acer truncatum HOM05D000043 ORTHO05D000437 1.1e-11 73.9 80 50.0
FAN11G0256 Fragaria x ananassa HOM05D000366 ORTHO05D000090 1.4e-11 73.6 80 48.8
Atru.chr3.4188 Acer truncatum HOM05D000366 ORTHO05D000437 2.4e-11 72.8 95 45.3
Lsat_1_v5_gn_8_70821 Lactuca sativa HOM05D000366 ORTHO05D000437 2.4e-11 72.8 149 34.9
FAN25G2814 Fragaria x ananassa HOM05D000366 ORTHO05D000437 3.2e-11 72.4 80 48.8
Duzib168G1898 Durio zibethinus HOM05D000366 ORTHO05D000437 4.2e-11 72.0 81 45.7
FvH4_3g44310 Fragaria vesca HOM05D000366 ORTHO05D000437 4.2e-11 72.0 80 47.5
Sc21g0006460 Simmondsia chinensis HOM05D000366 ORTHO05D000437 4.2e-11 72.0 103 42.7
SGA_v2.0_scaffold120G32900 Striga asiatica HOM05D000366 ORTHO05D000437 5.4e-11 71.6 153 34.0
arahy.Tifrunner.gnm1.ann1.ZYQ7LA Arachis hypogaea HOM05D000366 ORTHO05D000437 7.1e-11 71.2 143 36.4
Prupe.6G055100 Prunus persica HOM05D000366 ORTHO05D000437 1.2e-10 70.5 81 49.4
EL10Ac7g16192 Beta vulgaris HOM05D000366 ORTHO05D000437 1.6e-10 70.1 112 43.8
FAN11G2311 Fragaria x ananassa HOM05D000366 ORTHO05D000437 2.1e-10 69.7 78 47.4
CiPaw.14G057900 Carya illinoinensis HOM05D000366 ORTHO05D000437 2.7e-10 69.3 81 53.1
FvH4_3g38950 Fragaria vesca HOM05D000366 ORTHO05D026437 2.7e-10 69.3 78 47.4
Medtr3g464550 Medicago truncatula HOM05D000366 ORTHO05D000437 2.7e-10 69.3 146 34.2
Potri.009G072600 Populus trichocarpa HOM05D000366 ORTHO05D000437 2.7e-10 69.3 90 42.2
Hund20988 Selenicereus undatus HOM05D000366 ORTHO05D000437 3.5e-10 68.9 85 45.9
TWI79G0902 Tripterygium wilfordii HOM05D000366 ORTHO05D000437 3.5e-10 68.9 89 47.2
AUR62001624 Chenopodium quinoa HOM05D000366 ORTHO05D000437 1.0e-09 67.4 151 35.8
RcHm_v2.0_Chr5g0070181 Rosa chinensis HOM05D000366 ORTHO05D000437 1.0e-09 67.4 80 48.8
Glyma.11G171200 Glycine max HOM05D000366 ORTHO05D000437 1.3e-09 67.0 147 37.4
arahy.Tifrunner.gnm1.ann1.S706JK Arachis hypogaea HOM05D000366 ORTHO05D000437 1.8e-09 66.6 143 35.0
FAN21G1554 Fragaria x ananassa HOM05D000366 ORTHO05D000437 1.8e-09 66.6 80 46.2
Psat5g152800 Pisum sativum HOM05D000366 ORTHO05D000437 2.3e-09 66.2 146 34.9
Sabra09G0054900 Salix brachista HOM05D000366 ORTHO05D000437 2.3e-09 66.2 129 37.2
Cpa.g.sc2.437 Carica papaya HOM05D000366 ORTHO05D000437 3.9e-09 65.5 79 45.6
Cc01_g14390 Coffea canephora HOM05D000366 ORTHO05D000437 3.9e-09 65.5 82 48.8
Gorai.001G116700 Gossypium raimondii HOM05D000366 ORTHO05D000437 5.1e-09 65.1 127 34.6
Ciclev10027689m.g Citrus clementina HOM05D000366 ORTHO05D000437 6.7e-09 64.7 160 31.9
Glyma.11G170900 Glycine max HOM05D000366 ORTHO05D000437 1.9e-08 63.2 147 34.7
VMungo0647G2119 Vigna mungo HOM05D000366 ORTHO05D000437 1.9e-08 63.2 80 41.2
Lalb_Chr17g0345161 Lupinus albus HOM05D000366 ORTHO05D000437 2.5e-08 62.8 76 42.1
Ah.10g029430 Amaranthus hybridus HOM05D000366 ORTHO05D000437 3.3e-08 62.4 148 35.1
DCAR_007366 Daucus carota HOM05D000366 ORTHO05D000437 4.3e-08 62.0 137 37.2
Glyma.14G194800 Glycine max HOM05D000366 ORTHO05D000437 4.3e-08 62.0 76 47.4
Psat2g057000 Pisum sativum HOM05D000366 ORTHO05D000437 4.3e-08 62.0 82 42.7
AUR62020153 Chenopodium quinoa HOM05D000366 ORTHO05D000437 5.6e-08 61.6 151 37.1
Phvul.008G260100 Phaseolus vulgaris HOM05D000366 ORTHO05D000437 5.6e-08 61.6 80 43.8
Ca_26261_v3 Cicer arietinum L. HOM05D000366 ORTHO05D000437 9.6e-08 60.8 80 45.0
arahy.Tifrunner.gnm1.ann1.J886VA Arachis hypogaea HOM05D000366 ORTHO05D000437 1.3e-07 60.5 143 32.9
TAR623G0601 Trochodendron aralioides HOM05D000366 ORTHO05D000437 1.3e-07 60.5 109 36.7
Psat5g152920 Pisum sativum HOM05D000366 ORTHO05D026437 1.6e-07 60.1 145 33.1
Migut.N00775 Erythranthe guttata HOM05D000366 ORTHO05D000437 2.1e-07 59.7 82 43.9
Gohir.A07G104600 Gossypium hirsutum HOM05D000366 ORTHO05D000437 2.1e-07 59.7 127 33.1
GSVIVG01024716001 Vitis vinifera HOM05D000366 ORTHO05D000437 2.8e-07 59.3 33 81.8
Medtr5g071340 Medicago truncatula HOM05D000366 ORTHO05D000437 6.2e-07 58.2 80 42.5
PGR010G0007 Punica granatum HOM05D000366 ORTHO05D000437 6.2e-07 58.2 80 43.8
PGR119G0306 Punica granatum HOM05D000366 ORTHO05D000437 6.2e-07 58.2 80 43.8
CAN.G394.137 Capsicum annuum HOM05D000366 ORTHO05D000437 1.1e-06 57.4 78 42.3
ECA248G0431 Erigeron canadensis HOM05D000366 ORTHO05D000437 1.4e-06 57.0 145 33.8
Glyma.02G227900 Glycine max HOM05D000366 ORTHO05D000437 1.4e-06 57.0 48 60.4
Gohir.D07G108600 Gossypium hirsutum HOM05D000366 ORTHO05D000437 1.4e-06 57.0 146 34.2
Lj2C1083G3 Lonicera japonica HOM05D000366 ORTHO05D000437 1.4e-06 57.0 134 37.3
Manes.12G090700 Manihot esculenta HOM05D000366 ORTHO05D000437 1.4e-06 57.0 142 33.8
Sed0009073 Sechium edule HOM05D000366 ORTHO05D000437 5.3e-06 55.1 148 32.4
TPR.G27813 Trifolium pratense HOM05D000366 ORTHO05D000437 5.3e-06 55.1 34 73.5
Sopen06g033450 Solanum pennellii HOM05D000366 ORTHO05D000437 6.9e-06 54.7 76 40.8
Cfa011718 Carpinus fangiana HOM05D000366 ORTHO05D000437 9.0e-06 54.3 76 43.4
Ciclev10013761m.g Citrus clementina HOM05D000366 ORTHO05D000437 9.0e-06 54.3 32 71.9
MD03G1066300 Malus domestica HOM05D000366 ORTHO05D000437 9.0e-06 54.3 36 69.4
SGA_v2.0_scaffold144G35867 Striga asiatica HOM05D000366 ORTHO05D000437 9.0e-06 54.3 83 43.4


User provided reference genes

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