Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02895 Vaccinium macrocarpon HOM05D002376 ORTHO05D008821 2.6e-77 292.0 148 100.0
Rhsim13G0061900 Rhododendron simsii HOM05D002376 ORTHO05D008821 3.2e-59 231.9 164 78.0
Dinv28710 Davidia involucrata HOM05D002376 ORTHO05D008821 3.7e-55 218.4 134 82.8
Cfa010938 Carpinus fangiana HOM05D002376 ORTHO05D008821 7.0e-54 214.2 145 74.5
Lj1A123G47 Lonicera japonica HOM05D002376 ORTHO05D008821 3.5e-53 211.8 135 80.0
CSS0003249 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 1.3e-52 209.9 130 79.2
Haze_24442 Corylus avellana HOM05D002376 ORTHO05D008821 1.3e-52 209.9 144 72.9
Manes.18G140300 Manihot esculenta HOM05D002376 ORTHO05D008821 2.9e-52 208.8 150 73.3
CSS0028475 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 6.5e-52 207.6 154 72.7
MD11G1061300 Malus domestica HOM05D002376 ORTHO05D008821 1.5e-51 206.5 153 68.6
RcHm_v2.0_Chr5g0072361 Rosa chinensis HOM05D002376 ORTHO05D008821 7.2e-51 204.1 151 68.2
Migut.H01101 Erythranthe guttata HOM05D002376 ORTHO05D008821 9.4e-51 203.8 133 75.2
Actinidia23182 Actinidia chinensis HOM05D002376 ORTHO05D008821 1.2e-50 203.4 137 77.4
CiPaw.13G066200 Carya illinoinensis HOM05D002376 ORTHO05D008821 1.6e-50 203.0 153 69.3
HanXRQChr01g0012551 Helianthus annuus HOM05D002376 ORTHO05D008821 6.1e-50 201.1 150 70.7
TWI75G1859 Tripterygium wilfordii HOM05D002376 ORTHO05D008821 8.0e-50 200.7 149 69.8
GSVIVG01024598001 Vitis vinifera HOM05D002376 ORTHO05D008821 8.0e-50 200.7 148 68.2
TAR623G0666 Trochodendron aralioides HOM05D002376 ORTHO05D008821 1.8e-49 199.5 132 74.2
TAR287G0002 Trochodendron aralioides HOM05D002376 ORTHO05D008821 2.3e-49 199.1 148 66.2
Prupe.6G044100 Prunus persica HOM05D002376 ORTHO05D008821 6.8e-49 197.6 153 65.4
Nitab4.5_0000755g0130 Nicotiana tabacum HOM05D002376 ORTHO05D008821 1.2e-48 196.8 134 76.1
Sopen11g027160 Solanum pennellii HOM05D002376 ORTHO05D008821 2.6e-48 195.7 133 74.4
PGSC0003DMG400026358 Solanum tuberosum HOM05D002376 ORTHO05D008821 4.4e-48 194.9 133 73.7
QL03p067094 Quercus lobata HOM05D002376 ORTHO05D008821 5.7e-48 194.5 156 65.4
Nitab4.5_0009324g0020 Nicotiana tabacum HOM05D002376 ORTHO05D008821 7.5e-48 194.1 134 74.6
Peaxi162Scf00003g00413 Petunia axillaris HOM05D002376 ORTHO05D008821 9.8e-48 193.7 134 74.6
COL.COLO4_11184 Corchorus olitorius HOM05D002376 ORTHO05D008821 1.3e-47 193.4 152 67.8
Solyc11g068450.2 Solanum lycopersicum HOM05D002376 ORTHO05D008821 1.3e-47 193.4 133 73.7
ClCG02G019170 Citrullus lanatus HOM05D002376 ORTHO05D008821 1.7e-47 193.0 124 74.2
SalBow2G0685 Salvia bowleyana HOM05D002376 ORTHO05D008821 2.2e-47 192.6 126 71.4
Oeu064671.1 Olea europaea HOM05D000883 ORTHO05D002942 2.8e-47 192.2 133 72.2
CANSAT54G2364 Cannabis sativa HOM05D002376 ORTHO05D008821 3.7e-47 191.8 126 73.0
Thecc.09G361000 Theobroma cacao HOM05D002376 ORTHO05D008821 3.7e-47 191.8 152 69.1
SalBow2G2295 Salvia bowleyana HOM05D002376 ORTHO05D008821 1.1e-46 190.3 126 69.8
Cc01_g09100 Coffea canephora HOM05D002376 ORTHO05D008821 1.4e-46 189.9 133 72.2
DCAR_014464 Daucus carota HOM05D002376 ORTHO05D008821 2.4e-46 189.1 129 72.1
Duzib168G1911 Durio zibethinus HOM05D002376 ORTHO05D008821 3.1e-46 188.7 150 65.3
PGR102G2282 Punica granatum HOM05D002376 ORTHO05D008821 3.1e-46 188.7 155 65.8
Lsat_1_v5_gn_5_175460 Lactuca sativa HOM05D002376 ORTHO05D008821 4.1e-46 188.3 122 75.4
THA.LOC104800780 Tarenaya hassleriana HOM05D002376 ORTHO05D008821 5.4e-46 188.0 128 72.7
Sed0011436 Sechium edule HOM05D002376 ORTHO05D008821 9.1e-46 187.2 124 72.6
CsaV3_6G019000 Cucumis sativus L. HOM05D002376 ORTHO05D008821 1.6e-45 186.4 124 71.8
MELO3C025682.2 Cucumis melo HOM05D002376 ORTHO05D008821 2.7e-45 185.7 124 71.8
LjContig00141g0012114 Lotus japonicus HOM05D002376 ORTHO05D008821 7.7e-45 184.1 126 73.0
BcaB01g04113 Brassica carinata HOM05D002376 ORTHO05D008821 1.0e-44 183.7 124 72.6
Eucgr.B04014 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.0e-44 183.7 159 61.6
Eucgr.B04017 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.0e-44 183.7 159 61.6
Glyma.02G234100 Glycine max HOM05D002376 ORTHO05D008821 1.0e-44 183.7 126 71.4
Gorai.003G151600 Gossypium raimondii HOM05D002376 ORTHO05D008821 1.0e-44 183.7 124 75.0
arahy.Tifrunner.gnm1.ann1.F02FPT Arachis hypogaea HOM05D002376 ORTHO05D008821 1.3e-44 183.3 152 64.5
Carub.0004s1148 Capsella rubella HOM05D002376 ORTHO05D008821 1.3e-44 183.3 137 67.9
Ciclev10017044m.g Citrus clementina HOM05D002376 ORTHO05D008821 1.7e-44 183.0 124 71.8
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 2.3e-44 182.6 124 71.8
CARHR123650 Cardamine hirsuta HOM05D002376 ORTHO05D008821 2.9e-44 182.2 137 67.2
Aa31LG5G6370 Aethionema arabicum HOM05D002376 ORTHO05D008821 3.8e-44 181.8 124 72.6
ATR0586G003 Amborella trichopoda HOM05D002376 ORTHO05D008821 3.8e-44 181.8 125 66.4
Gohir.D03G144300 Gossypium hirsutum HOM05D002376 ORTHO05D008821 3.8e-44 181.8 124 74.2
Phvul.008G249600 Phaseolus vulgaris HOM05D002376 ORTHO05D008821 3.8e-44 181.8 126 69.8
BcaC01g05988 Brassica carinata HOM05D002376 ORTHO05D008821 5.0e-44 181.4 140 66.4
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 5.0e-44 181.4 140 66.4
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 5.0e-44 181.4 140 66.4
FvH4_3g40170 Fragaria vesca HOM05D002376 ORTHO05D008821 6.5e-44 181.0 124 67.7
Sabra13G0126300 Salix brachista HOM05D002376 ORTHO05D008821 6.5e-44 181.0 140 66.4
Gohir.A03G024200 Gossypium hirsutum HOM05D002376 ORTHO05D008821 1.5e-43 179.9 124 73.4
Thhalv10017367m.g Eutrema salsugineum HOM05D002376 ORTHO05D008821 2.5e-43 179.1 124 70.2
Sp4g12890 Schrenkiella parvula HOM05D002376 ORTHO05D008821 3.3e-43 178.7 120 71.7
Lalb_Chr17g0345531 Lupinus albus HOM05D002376 ORTHO05D008821 4.2e-43 178.3 149 63.1
TPR.G17753 Trifolium pratense HOM05D002376 ORTHO05D008821 4.2e-43 178.3 130 69.2
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 4.2e-43 178.3 122 70.5
Potri.013G156700 Populus trichocarpa HOM05D002376 ORTHO05D008821 5.5e-43 177.9 156 62.8
Medtr5g074880 Medicago truncatula HOM05D002376 ORTHO05D008821 9.5e-43 177.2 123 73.2
AT2G30330 Arabidopsis thaliana HOM05D002376 ORTHO05D008821 1.2e-42 176.8 143 62.9
PSO170G0682 Papaver somniferum HOM05D002376 ORTHO05D008821 1.2e-42 176.8 124 68.5
Aqoxy4G02143 Aquilegia oxysepala HOM05D002376 ORTHO05D008821 1.6e-42 176.4 123 69.9
AL4G25190 Arabidopsis lyrata HOM05D002376 ORTHO05D008821 1.6e-42 176.4 124 69.4
Atru.chr6.2418 Acer truncatum HOM05D002376 ORTHO05D008821 1.4e-41 173.3 137 63.5
CDE06G1730 Ceratophyllum demersum HOM05D002376 ORTHO05D008821 1.8e-41 172.9 121 66.1
AUR62009722 Chenopodium quinoa HOM05D002376 ORTHO05D008821 1.8e-41 172.9 123 69.9
Lalb_Chr10g0103701 Lupinus albus HOM05D002376 ORTHO05D008821 8.9e-41 170.6 146 58.9
Ah.15g096510 Amaranthus hybridus HOM05D002376 ORTHO05D008821 1.2e-40 170.2 122 68.9
AUR62036225 Chenopodium quinoa HOM05D002376 ORTHO05D008821 3.4e-40 168.7 123 68.3
EL10Ac7g15863 Beta vulgaris HOM05D002376 ORTHO05D008821 5.7e-40 167.9 142 60.6
Dinv12257 Davidia involucrata HOM05D002376 ORTHO05D008821 9.8e-40 167.2 122 75.4
Os11g0112300 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 2.8e-39 165.6 124 62.9
Psat2g052040 Pisum sativum HOM05D002376 ORTHO05D008821 2.8e-39 165.6 153 60.8
HPP92_009016 Vanilla planifolia HOM05D002376 ORTHO05D008821 3.7e-39 165.2 126 61.9
arahy.Tifrunner.gnm1.ann1.6WW78Y Arachis hypogaea HOM05D002376 ORTHO05D008821 4.9e-39 164.9 195 51.3
Actinidia32596 Actinidia chinensis HOM05D002376 ORTHO05D008821 1.4e-38 163.3 104 76.9
CAN.G1358.8 Capsicum annuum HOM05D002376 ORTHO05D008821 2.4e-38 162.5 100 79.0
Prupe.6G095400 Prunus persica HOM05D002376 ORTHO05D008821 7.0e-38 161.0 149 59.1
Eucgr.L02725 Eucalyptus grandis HOM05D002376 ORTHO05D008821 2.7e-37 159.1 108 70.4
MD03G1059100 Malus domestica HOM05D002376 ORTHO05D008821 4.5e-37 158.3 158 57.6
Eucgr.B02271 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.3e-36 156.8 108 69.4
CSS0017661 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 1.1e-35 153.7 100 77.0
MBI15_g06972_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 1.2e-34 150.2 171 49.7
Nn4g26021 Nelumbo nucifera HOM05D002376 ORTHO05D008821 8.0e-34 147.5 116 63.8
Sc06g0008070 Simmondsia chinensis HOM05D002376 ORTHO05D008821 2.3e-33 146.0 120 64.2
Cpa.g.sc2.331 Carica papaya HOM05D002376 ORTHO05D008821 4.4e-32 141.7 100 71.0
PSO017G2121 Papaver somniferum HOM05D002376 ORTHO05D008821 9.8e-32 140.6 103 65.0
COL.COLO4_11185 Corchorus olitorius HOM05D002376 ORTHO05D008821 1.3e-31 140.2 122 63.9
SGA_v2.0_scaffold77G25373 Striga asiatica HOM05D002376 ORTHO05D008821 1.1e-30 137.1 103 66.0
Mapoly0069s0031 Marchantia polymorpha HOM05D002376 ORTHO05D008821 1.9e-30 136.3 122 51.6
Pp3c20_8500 Physcomitrium patens HOM05D002376 ORTHO05D008821 1.9e-30 136.3 119 53.8
FAN21G3738 Fragaria x ananassa HOM05D002376 ORTHO05D008821 7.0e-30 134.4 122 57.4
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 1.2e-29 133.7 96 68.8
Hund18966 Selenicereus undatus HOM05D002376 ORTHO05D008821 2.7e-29 132.5 97 66.0
AagrBONN_evm.TU.Sc2ySwM_228.448 Anthoceros agrestis HOM05D002376 ORTHO05D008821 1.0e-28 130.6 120 51.7
FAN11G0211 Fragaria x ananassa HOM05D002376 ORTHO05D008821 8.6e-28 127.5 96 61.5
FAN16G0225 Fragaria x ananassa HOM05D002376 ORTHO05D008821 2.5e-27 125.9 96 60.4
Ca_05691_v3 Cicer arietinum L. HOM05D002376 ORTHO05D008821 1.6e-26 123.2 92 70.7
Os12g0416500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 4.9e-23 111.7 90 60.0
SMO361G0428 Selaginella moellendorffii HOM05D002376 ORTHO05D008821 2.3e-20 102.8 99 52.5
MBI07_g35969_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 6.6e-20 101.3 71 70.4
CBR_g4891 Chara braunii HOM05D006348 ORTHO05D008261 2.5e-19 99.4 101 44.6
MBI15_g36803_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 2.5e-19 99.4 126 46.0
SHI19244 Sapria himalayana HOM05D002376 ORTHO05D008821 5.6e-19 98.2 90 57.8
Zm00001eb276260 Zea mays HOM05D002376 ORTHO05D008821 6.2e-18 94.7 74 62.2
Os12g0111900 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 5.2e-17 91.7 94 48.9
MD03G1104100 Malus domestica HOM05D002376 ORTHO05D008821 4.4e-16 88.6 151 37.7
ECA248G3831 Erigeron canadensis HOM05D002376 ORTHO05D008821 5.4e-14 81.6 78 59.0
MCO04G004 Micromonas commoda HOM05D002376 ORTHO05D008821 5.1e-12 75.1 113 31.9


User provided reference genes

Program Settings