Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 1.2e-255 885.9 448 100.0
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 6.7e-201 704.1 492 75.8
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 1.1e-182 643.7 500 69.0
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 5.8e-168 594.7 497 65.2
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 5.6e-155 551.6 494 60.7
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 1.1e-153 547.4 495 61.2
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 2.5e-147 526.2 468 61.5
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 4.3e-147 525.4 503 57.5
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 7.3e-147 524.6 488 58.2
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 9.5e-147 524.2 425 64.7
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 1.6e-146 523.5 495 58.0
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 1.8e-145 520.0 495 56.4
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 3.1e-145 519.2 484 56.8
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 4.9e-143 511.9 481 57.8
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 9.2e-142 507.7 465 57.4
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 1.2e-141 507.3 489 56.6
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 2.1e-141 506.5 482 56.8
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 3.5e-141 505.8 423 61.2
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 3.5e-141 505.8 559 53.0
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 4.6e-141 505.4 484 56.0
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 4.6e-141 505.4 482 57.3
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 1.7e-140 503.4 472 58.1
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 1.6e-138 496.9 499 54.7
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 3.6e-138 495.7 485 55.5
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 1.1e-137 494.2 464 56.9
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 2.4e-137 493.0 418 61.2
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 2.4e-137 493.0 459 57.1
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 5.3e-137 491.9 502 56.2
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 9.0e-137 491.1 465 56.6
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 1.2e-136 490.7 498 54.4
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 7.6e-136 488.0 465 56.6
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 9.9e-136 487.6 416 61.3
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 9.9e-136 487.6 496 54.2
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.7e-135 486.9 486 54.9
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 3.8e-135 485.7 501 53.5
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 8.4e-135 484.6 494 55.7
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 1.1e-134 484.2 441 58.0
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 2.4e-134 483.0 429 59.0
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 5.4e-134 481.9 462 56.5
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 7.1e-134 481.5 496 54.0
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 1.2e-133 480.7 440 58.2
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 1.2e-133 480.7 448 58.0
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 1.6e-133 480.3 496 53.8
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 3.5e-133 479.2 440 58.0
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 1.0e-132 477.6 441 57.6
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 1.3e-132 477.2 482 55.2
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 3.0e-132 476.1 443 57.3
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.1e-131 474.2 465 55.1
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 9.6e-131 471.1 470 55.3
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 1.3e-130 470.7 448 56.7
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 6.2e-130 468.4 480 54.8
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 8.1e-130 468.0 455 55.8
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 1.1e-129 467.6 447 55.9
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 5.3e-129 465.3 434 57.4
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 5.3e-129 465.3 406 59.6
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 9.0e-129 464.5 440 56.4
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 2.6e-128 463.0 423 59.8
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 2.6e-128 463.0 419 57.3
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 3.4e-128 462.6 423 59.8
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 7.6e-128 461.5 373 61.9
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 7.6e-128 461.5 454 55.3
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 9.9e-128 461.1 426 56.8
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 1.7e-127 460.3 414 57.2
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 2.4e-126 456.4 458 52.8
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 4.2e-126 455.7 493 53.1
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 5.4e-126 455.3 516 50.8
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 1.6e-125 453.8 415 56.4
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 2.7e-125 453.0 420 57.1
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 4.6e-125 452.2 437 54.5
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 1.8e-124 450.3 445 53.3
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 2.3e-124 449.9 448 56.7
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 3.0e-124 449.5 404 58.2
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 5.1e-124 448.7 419 55.4
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 6.7e-124 448.4 523 49.9
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 1.5e-123 447.2 491 51.1
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 4.3e-123 445.7 415 55.4
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 5.6e-123 445.3 480 52.7
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 2.8e-122 443.0 327 66.7
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 4.8e-122 442.2 463 52.7
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 2.0e-120 436.8 327 66.4
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 4.5e-120 435.6 425 53.9
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 5.5e-118 428.7 283 74.6
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 2.1e-117 426.8 443 53.5
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 2.1e-117 426.8 440 52.7
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 6.7e-116 421.8 393 55.0
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 2.5e-115 419.9 419 53.9
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 2.5e-115 419.9 425 55.5
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 2.8e-114 416.4 492 48.6
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.7e-114 416.0 374 56.1
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 1.1e-113 414.5 405 55.1
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 1.3e-111 407.5 519 46.6
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 1.3e-111 407.5 323 62.2
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 1.7e-111 407.1 336 59.8
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 3.8e-111 406.0 425 50.6
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 4.9e-111 405.6 422 53.3
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 5.3e-105 385.6 490 46.5
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 9.7e-99 364.8 361 57.9
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 5.0e-87 325.9 302 53.6
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 2.0e-80 303.9 423 43.0
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 3.0e-76 290.0 430 40.7
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 9.1e-73 278.5 421 37.5
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 3.5e-72 276.6 176 75.0
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 1.5e-70 271.2 334 47.3
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 1.0e-68 265.0 227 60.8
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 1.7e-66 257.7 400 39.2
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 5.9e-64 249.2 422 37.2
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 7.8e-56 222.2 287 48.8
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 1.3e-55 221.5 214 55.6
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 4.9e-42 176.4 317 39.1
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 5.1e-39 166.4 210 49.0
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 2.6e-35 154.1 101 71.3
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 9.9e-35 152.1 440 29.1
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 1.2e-32 145.2 102 62.7
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 1.3e-31 141.7 164 53.7
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 5.6e-30 136.3 116 56.0
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 3.0e-23 114.0 87 63.2
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 9.0e-20 102.4 311 27.0
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 3.8e-18 97.1 101 59.4
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 1.7e-15 88.2 90 46.7
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 4.8e-13 80.1 103 49.5
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 8.1e-13 79.3 56 73.2
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 8.1e-13 79.3 76 51.3
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 1.8e-12 78.2 73 50.7
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 9.9e-11 72.4 57 63.2
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 2.2e-10 71.2 107 45.8
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 8.4e-10 69.3 51 60.8


User provided reference genes

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