Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 2.3e-66 255.4 122 100.0
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 1.4e-52 209.5 121 86.8
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 1.2e-48 196.4 121 81.0
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 4.4e-46 188.0 121 76.9
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 1.6e-43 179.5 122 71.3
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 7.8e-43 177.2 121 71.1
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 7.8e-43 177.2 121 74.4
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 1.0e-42 176.8 121 71.9
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 1.7e-42 176.0 121 69.4
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 5.1e-42 174.5 121 70.2
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 1.1e-41 173.3 121 66.9
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 2.5e-41 172.2 121 70.2
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 2.5e-41 172.2 121 67.8
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 7.3e-41 170.6 121 70.2
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 9.5e-41 170.2 121 67.8
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 1.2e-40 169.9 121 66.1
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 1.2e-40 169.9 121 66.1
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 1.2e-40 169.9 121 69.4
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 1.6e-40 169.5 121 67.8
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 1.6e-40 169.5 121 67.8
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 1.6e-40 169.5 121 68.6
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 1.6e-40 169.5 122 67.2
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 1.6e-40 169.5 121 71.1
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 1.6e-40 169.5 121 68.6
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 2.1e-40 169.1 121 67.8
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 2.1e-40 169.1 121 70.2
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 2.1e-40 169.1 121 68.6
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 2.8e-40 168.7 121 68.6
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 2.8e-40 168.7 121 66.9
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 2.8e-40 168.7 121 66.9
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 4.7e-40 167.9 121 67.8
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 4.7e-40 167.9 121 67.8
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 6.2e-40 167.5 124 67.7
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 6.2e-40 167.5 121 67.8
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 6.2e-40 167.5 121 67.8
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 6.2e-40 167.5 121 66.1
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 8.1e-40 167.2 121 69.4
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 1.1e-39 166.8 122 66.4
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 1.4e-39 166.4 121 66.1
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 1.8e-39 166.0 121 66.1
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 1.8e-39 166.0 121 66.1
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 1.8e-39 166.0 129 65.9
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 2.3e-39 165.6 121 64.5
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 2.3e-39 165.6 122 67.2
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 4.0e-39 164.9 121 66.9
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 4.0e-39 164.9 124 67.7
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 5.2e-39 164.5 121 64.5
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 6.8e-39 164.1 121 67.8
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 1.5e-38 162.9 121 65.3
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 2.0e-38 162.5 121 66.1
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 3.4e-38 161.8 121 65.3
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 3.4e-38 161.8 121 66.9
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 7.6e-38 160.6 121 64.5
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 1.3e-37 159.8 121 64.5
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 1.7e-37 159.5 121 61.2
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 1.7e-37 159.5 121 63.6
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 2.9e-37 158.7 122 63.9
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 3.7e-37 158.3 122 61.5
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 3.7e-37 158.3 124 63.7
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 4.9e-37 157.9 121 64.5
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 4.9e-37 157.9 121 63.6
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 8.3e-37 157.1 121 62.0
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 1.1e-36 156.8 121 63.6
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 1.9e-36 156.0 121 65.3
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 2.4e-36 155.6 124 62.1
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 2.4e-36 155.6 121 62.8
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 3.2e-36 155.2 123 63.4
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 7.1e-36 154.1 121 61.2
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 1.2e-35 153.3 121 64.5
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 1.3e-34 149.8 123 58.5
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 1.1e-33 146.7 123 57.7
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 1.2e-32 143.3 124 59.7
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 2.1e-32 142.5 80 82.5
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 3.1e-31 138.7 121 56.2
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 8.9e-31 137.1 128 54.7
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 2.6e-30 135.6 80 77.5
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 4.4e-30 134.8 76 82.9
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 4.4e-30 134.8 122 58.2
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 5.4e-28 127.9 107 64.5
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 7.1e-28 127.5 106 61.3
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 2.1e-27 125.9 119 48.7
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 3.9e-26 121.7 122 50.0
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 4.3e-25 118.2 69 73.9
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 4.8e-24 114.8 120 49.2
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 6.2e-24 114.4 126 50.0
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 1.2e-22 110.2 105 58.1


User provided reference genes

Program Settings