Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02372 Vaccinium macrocarpon HOM05D006460 ORTHO05D008143 0.0e+00 1082.0 530 100.0
Actinidia21358 Actinidia chinensis HOM05D006460 ORTHO05D008143 3.2e-194 682.2 535 65.6
Rhsim13G0001100 Rhododendron simsii HOM05D006460 ORTHO05D008143 9.4e-194 680.6 467 75.8
CSS0037090 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 3.8e-187 658.7 535 64.5
Duzib138G1376 Durio zibethinus HOM05D006460 ORTHO05D008143 2.0e-175 619.8 527 61.3
TAR362G0080 Trochodendron aralioides HOM05D006460 ORTHO05D008143 3.4e-175 619.0 527 61.3
Lj1C11T12 Lonicera japonica HOM05D006460 ORTHO05D008143 9.2e-173 610.9 527 60.3
COL.COLO4_23162 Corchorus olitorius HOM05D006460 ORTHO05D008143 2.0e-172 609.8 521 61.0
Atru.chr5.915 Acer truncatum HOM05D006460 ORTHO05D008143 1.0e-171 607.4 517 60.7
Prupe.3G004500 Prunus persica HOM05D006460 ORTHO05D008143 6.6e-171 604.7 524 59.5
QL12p034319 Quercus lobata HOM05D006460 ORTHO05D008143 4.7e-169 598.6 522 60.3
Potri.002G189800 Populus trichocarpa HOM05D006460 ORTHO05D008143 1.8e-168 596.7 519 59.0
CAN.G100.27 Capsicum annuum HOM05D006460 ORTHO05D008143 1.5e-167 593.6 520 59.2
Eucgr.H00886 Eucalyptus grandis HOM05D006460 ORTHO05D008143 5.8e-167 591.7 517 59.2
Haze_05122 Corylus avellana HOM05D006460 ORTHO05D008143 1.3e-166 590.5 521 58.2
GSVIVG01028196001 Vitis vinifera HOM05D006460 ORTHO05D008143 2.9e-166 589.3 517 59.8
Gorai.001G146600 Gossypium raimondii HOM05D006460 ORTHO05D008143 8.3e-166 587.8 517 59.0
Gohir.D07G134900 Gossypium hirsutum HOM05D006460 ORTHO05D008143 2.4e-165 586.3 517 58.8
Sabra02G0165800 Salix brachista HOM05D006460 ORTHO05D008143 2.4e-165 586.3 519 58.2
Sc17g0000180 Simmondsia chinensis HOM05D006460 ORTHO05D008143 4.1e-165 585.5 520 59.0
PGSC0003DMG400005211 Solanum tuberosum HOM05D006460 ORTHO05D008143 9.2e-165 584.3 517 58.0
MD09G1293200 Malus domestica HOM05D006460 ORTHO05D008143 1.6e-164 583.6 524 59.4
TWI14G0400 Tripterygium wilfordii HOM05D006460 ORTHO05D008143 6.0e-164 581.6 521 57.8
Solyc01g068050.3 Solanum lycopersicum HOM05D006460 ORTHO05D008143 1.7e-163 580.1 517 57.6
FAN28G1427 Fragaria x ananassa HOM05D006460 ORTHO05D008143 2.3e-163 579.7 529 57.3
PGR083G0788 Punica granatum HOM05D006460 ORTHO05D008143 8.6e-163 577.8 518 59.1
Ciclev10001046m.g Citrus clementina HOM05D006460 ORTHO05D008143 1.5e-162 577.0 522 57.7
Cpa.g.sc543.2 Carica papaya HOM05D006460 ORTHO05D008143 1.6e-161 573.5 527 59.0
FvH4_1g26500 Fragaria vesca HOM05D006460 ORTHO05D008143 2.8e-161 572.8 529 56.9
Thecc.01G322200 Theobroma cacao HOM05D006460 ORTHO05D008143 8.1e-161 571.2 519 58.0
Oeu002575.1 Olea europaea HOM05D006460 ORTHO05D008143 1.8e-160 570.1 519 56.3
Sed0027463 Sechium edule HOM05D006460 ORTHO05D008143 1.8e-160 570.1 517 57.1
CANSAT56G1882 Cannabis sativa HOM05D006460 ORTHO05D008143 4.0e-160 568.9 523 57.7
DCAR_012316 Daucus carota HOM05D006460 ORTHO05D008143 8.9e-160 567.8 517 57.1
Nn4g25417 Nelumbo nucifera HOM05D006460 ORTHO05D008143 1.5e-159 567.0 537 57.0
RcHm_v2.0_Chr3g0486571 Rosa chinensis HOM05D006460 ORTHO05D008143 2.0e-159 566.6 539 56.0
ClCG09G004700 Citrullus lanatus HOM05D006460 ORTHO05D008143 4.4e-159 565.5 528 56.6
CiPaw.04G089700 Carya illinoinensis HOM05D006460 ORTHO05D008143 2.2e-158 563.1 514 58.2
Lalb_Chr17g0338451 Lupinus albus HOM05D006460 ORTHO05D008143 3.7e-158 562.4 525 56.4
AUR62024570 Chenopodium quinoa HOM05D006460 ORTHO05D008143 2.4e-157 559.7 517 57.3
SalBow6G2760 Salvia bowleyana HOM05D006460 ORTHO05D008143 3.5e-156 555.8 524 55.7
AUR62011736 Chenopodium quinoa HOM05D006460 ORTHO05D008143 2.3e-155 553.1 517 57.1
Phvul.003G019300 Phaseolus vulgaris HOM05D006460 ORTHO05D008143 3.0e-155 552.7 517 56.1
Lj2g0013221 Lotus japonicus HOM05D006460 ORTHO05D008143 5.1e-155 552.0 518 55.8
VMungo1215G1636 Vigna mungo HOM05D006460 ORTHO05D008143 8.6e-155 551.2 531 54.4
Cc01_g21920 Coffea canephora HOM05D006460 ORTHO05D008143 1.5e-154 550.4 519 57.4
Manes.05G010900 Manihot esculenta HOM05D006460 ORTHO05D008143 2.5e-154 549.7 516 56.2
Ca_12543_v3 Cicer arietinum L. HOM05D006460 ORTHO05D008143 2.1e-153 546.6 517 54.9
Glyma.07G170000 Glycine max HOM05D006460 ORTHO05D008143 8.1e-153 544.7 515 55.0
Aqoxy5G02768 Aquilegia oxysepala HOM05D006460 ORTHO05D008143 1.4e-152 543.9 525 53.5
Nitab4.5_0000222g0270 Nicotiana tabacum HOM05D006460 ORTHO05D008143 1.4e-152 543.9 550 53.5
Migut.D00030 Erythranthe guttata HOM05D006460 ORTHO05D008143 8.9e-152 541.2 524 55.0
HanXRQChr13g0414441 Helianthus annuus HOM05D006460 ORTHO05D008143 1.2e-151 540.8 517 56.3
THA.LOC104801320 Tarenaya hassleriana HOM05D006460 ORTHO05D008143 3.4e-151 539.3 521 53.0
Gohir.A07G130500 Gossypium hirsutum HOM05D006460 ORTHO05D008143 5.8e-151 538.5 517 55.7
Hund09677 Selenicereus undatus HOM05D006460 ORTHO05D008143 2.2e-150 536.6 519 54.3
Aa31LG5G1480 Aethionema arabicum HOM05D006460 ORTHO05D008143 7.1e-149 531.6 515 52.8
MSTRG.21724 Avicennia marina HOM05D006460 ORTHO05D008143 2.1e-148 530.0 523 54.3
Psat6g046360 Pisum sativum HOM05D006460 ORTHO05D008143 4.6e-148 528.9 517 53.4
TPR.G36866 Trifolium pratense HOM05D006460 ORTHO05D008143 6.0e-148 528.5 552 51.1
Lsat_1_v5_gn_8_167341 Lactuca sativa HOM05D006460 ORTHO05D008143 1.0e-147 527.7 515 55.0
Medtr1g032120 Medicago truncatula HOM05D006460 ORTHO05D008143 1.3e-147 527.3 518 53.7
arahy.Tifrunner.gnm1.ann1.N25L3F Arachis hypogaea HOM05D006460 ORTHO05D008143 1.7e-147 526.9 544 52.4
Thhalv10028644m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 2.3e-147 526.6 521 52.2
Thhalv10028645m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 2.3e-147 526.6 521 52.2
SGA_v2.0_scaffold417G51258 Striga asiatica HOM05D006460 ORTHO05D008143 5.1e-147 525.4 524 54.2
Sp6g01720 Schrenkiella parvula HOM05D006460 ORTHO05D008143 1.9e-146 523.5 519 52.4
FAN26G0500 Fragaria x ananassa HOM05D006460 ORTHO05D008143 3.3e-146 522.7 529 53.7
FAN19G0891 Fragaria x ananassa HOM05D006460 ORTHO05D008143 7.3e-146 521.5 529 53.7
arahy.Tifrunner.gnm1.ann1.R72PZK Arachis hypogaea HOM05D006460 ORTHO05D008143 2.1e-145 520.0 550 51.1
AT4G01880 Arabidopsis thaliana HOM05D006460 ORTHO05D008143 6.2e-145 518.5 521 52.8
CSS0008981 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 1.1e-144 517.7 457 61.7
BraA03t12325Z Brassica rapa HOM05D006460 ORTHO05D008143 1.8e-144 516.9 517 52.2
CARHR249840 Cardamine hirsuta HOM05D006460 ORTHO05D008143 1.8e-144 516.9 516 52.3
A03p31440 Brassica napus HOM05D006460 ORTHO05D008143 8.9e-144 514.6 518 51.9
Cfa004883 Carpinus fangiana HOM05D006460 ORTHO05D008143 8.9e-144 514.6 465 57.6
C03p38430 Brassica napus HOM05D006460 ORTHO05D008143 1.2e-143 514.2 518 51.9
AL6G51420 Arabidopsis lyrata HOM05D006460 ORTHO05D008143 2.0e-143 513.5 522 52.5
BcaC01g06799 Brassica carinata HOM05D006460 ORTHO05D008143 2.6e-143 513.1 516 51.7
BolC3t16117H Brassica oleracea HOM05D006460 ORTHO05D008143 2.6e-143 513.1 516 51.7
Carub.0006s3536 Capsella rubella HOM05D006460 ORTHO05D008143 5.8e-143 511.9 519 50.9
BcaB01g02385 Brassica carinata HOM05D006460 ORTHO05D008143 1.7e-142 510.4 519 51.1
PSO357G0369 Papaver somniferum HOM05D006460 ORTHO05D008143 3.8e-142 509.2 518 52.9
EL10As5g23582 Beta vulgaris HOM05D006460 ORTHO05D008143 8.4e-142 508.1 527 52.2
CDE08G1018 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 2.7e-140 503.1 530 51.3
ATR0796G118 Amborella trichopoda HOM05D006460 ORTHO05D008143 3.1e-136 489.6 547 48.8
Nitab4.5_0002994g0020 Nicotiana tabacum HOM05D006460 ORTHO05D008143 6.7e-131 471.9 546 48.9
MELO3C023610.2 Cucumis melo HOM05D006460 ORTHO05D008143 8.7e-131 471.5 504 50.6
Dinv33158 Davidia involucrata HOM05D001974 ORTHO05D001995 5.6e-130 468.8 383 62.7
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 4.8e-129 465.7 485 52.2
CsaV3_7G030430 Cucumis sativus L. HOM05D006460 ORTHO05D008143 4.2e-125 452.6 413 58.6
Eucgr.L00887 Eucalyptus grandis HOM05D006460 ORTHO05D008143 1.6e-124 450.7 398 58.8
Ah.11g045760 Amaranthus hybridus HOM05D006460 ORTHO05D008143 2.6e-119 433.3 520 47.3
HPP92_010877 Vanilla planifolia HOM05D000746 ORTHO05D000573 2.9e-118 429.9 518 44.6
PSO170G6216 Papaver somniferum HOM05D006460 ORTHO05D008143 9.3e-117 424.9 432 53.0
PSO384G3244 Papaver somniferum HOM05D006460 ORTHO05D008143 1.3e-115 421.0 433 52.4
Zm00001eb211340 Zea mays HOM05D006460 ORTHO05D008143 3.4e-103 379.8 431 47.8
Sopen01g029980 Solanum pennellii HOM05D006460 ORTHO05D008143 3.8e-102 376.3 337 58.5
Peaxi162Scf00919g00047 Petunia axillaris HOM05D006460 ORTHO05D008143 2.0e-98 364.0 401 50.4
Pp3c21_16200 Physcomitrium patens HOM05D006460 ORTHO05D008143 7.4e-98 362.1 568 37.3
AagrBONN_evm.TU.Sc2ySwM_228.322 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.8e-96 357.5 529 38.4
Mapoly0095s0050 Marchantia polymorpha HOM05D006460 ORTHO05D008143 3.4e-95 353.2 546 38.5
AagrBONN_evm.TU.Sc2ySwM_344.3324 Anthoceros agrestis HOM05D006460 ORTHO05D008143 3.2e-93 346.7 524 38.2
SMO010G0007 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 1.3e-81 308.1 523 35.8
MBI18_g28900_MAGBIO Magnolia biondii HOM05D006460 ORTHO05D008143 2.5e-77 293.9 499 37.9
unitig_578.g16638 Utricularia gibba HOM05D006460 ORTHO05D008143 7.2e-69 265.8 259 55.2
Os03g0833200 Oryza sativa ssp. japonica HOM05D006460 ORTHO05D008143 8.9e-59 232.3 262 47.7
MCO13G012 Micromonas commoda HOM05D006460 ORTHO05D008143 9.8e-50 202.2 542 29.0
MD17G1281000 Malus domestica HOM05D006460 ORTHO05D008143 1.2e-44 185.3 239 45.6
SEGI_40178 Sequoiadendron giganteum HOM05D006460 ORTHO05D008143 4.7e-44 183.3 282 38.7
AUR62029044 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.9e-40 171.4 158 60.8
AUR62036055 Chenopodium quinoa HOM05D006460 ORTHO05D008143 2.4e-40 171.0 158 60.8
PRCOL_00001885 Prasinoderma coloniale HOM05D006460 ORTHO05D008143 2.4e-35 154.5 547 25.4
SMO339G0034 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 3.1e-35 154.1 301 32.2
AagrBONN_evm.TU.Sc2ySwM_228.45 Anthoceros agrestis HOM05D006460 ORTHO05D008143 5.6e-21 106.7 232 33.6
Hund09679 Selenicereus undatus HOM05D006460 ORTHO05D008143 3.1e-19 100.9 116 47.4
QL04p085746 Quercus lobata HOM05D006460 ORTHO05D008143 1.7e-17 95.1 107 48.6
RcHm_v2.0_Chr7g0232271 Rosa chinensis HOM05D006460 ORTHO05D008143 6.4e-17 93.2 78 62.8
Cre16.g654992 Chlamydomonas reinhardtii HOM05D006460 ORTHO05D008143 8.4e-17 92.8 822 18.6
CBR_g49426 Chara braunii HOM05D006460 ORTHO05D008143 5.4e-16 90.1 83 48.2
AUR62007801 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.1e-13 82.4 82 57.3
QL05p033637 Quercus lobata HOM05D000101 ORTHO05D000089 2.0e-10 71.6 68 55.9
CDE02G3709 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 4.5e-10 70.5 46 67.4
CSS0016884 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 5.8e-10 70.1 65 52.3
CSS0037496 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 5.8e-10 70.1 65 52.3
AUR62043166 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.8e-06 58.5 66 53.0


User provided reference genes

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