Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02240 Vaccinium macrocarpon HOM05D004759 ORTHO05D005722 2.1e-158 562.4 291 100.0
vmacro22691 Vaccinium macrocarpon HOM05D004759 ORTHO05D005722 2.1e-155 552.4 289 99.3
Rhsim11G0187000 Rhododendron simsii HOM05D004759 ORTHO05D005722 2.4e-135 485.7 289 86.9
Peaxi162Scf00362g01041 Petunia axillaris HOM05D004759 ORTHO05D005722 7.1e-119 431.0 288 73.3
PGSC0003DMG400001638 Solanum tuberosum HOM05D004759 ORTHO05D005722 4.3e-116 421.8 289 73.0
Solyc01g111040.4 Solanum lycopersicum HOM05D004759 ORTHO05D005722 9.7e-116 420.6 289 72.7
CAN.G588.16 Capsicum annuum HOM05D004759 ORTHO05D005722 3.7e-115 418.7 289 72.7
Sopen01g053100 Solanum pennellii HOM05D004759 ORTHO05D005722 4.8e-115 418.3 289 72.7
Cfa005166 Carpinus fangiana HOM05D004759 ORTHO05D005722 1.8e-114 416.4 287 71.4
Nitab4.5_0000283g0200 Nicotiana tabacum HOM05D004759 ORTHO05D005722 8.5e-112 407.5 289 71.6
TWI79G0483 Tripterygium wilfordii HOM05D004759 ORTHO05D005722 8.5e-112 407.5 287 71.4
Gohir.A03G202700 Gossypium hirsutum HOM05D004759 ORTHO05D005722 1.4e-111 406.8 288 70.8
Potri.009G127800 Populus trichocarpa HOM05D004759 ORTHO05D005722 2.5e-111 406.0 287 71.8
Manes.04G079000 Manihot esculenta HOM05D004759 ORTHO05D005722 1.2e-110 403.7 287 70.4
Lj5A186G40 Lonicera japonica HOM05D004759 ORTHO05D005722 1.6e-110 403.3 288 70.1
Duzib248G0603 Durio zibethinus HOM05D004759 ORTHO05D005722 6.1e-110 401.4 287 71.8
QL11p047309 Quercus lobata HOM05D004759 ORTHO05D005722 6.1e-110 401.4 287 70.0
Eucgr.I01368 Eucalyptus grandis HOM05D004759 ORTHO05D005722 1.0e-109 400.6 286 71.7
Sabra04G0112000 Salix brachista HOM05D004759 ORTHO05D005722 1.0e-109 400.6 287 71.4
Gorai.005G251800 Gossypium raimondii HOM05D004759 ORTHO05D005722 1.8e-109 399.8 288 70.5
Thecc.02G068600 Theobroma cacao HOM05D004759 ORTHO05D005722 1.8e-109 399.8 287 69.7
CANSAT25G1906 Cannabis sativa HOM05D004759 ORTHO05D005722 3.0e-109 399.1 289 69.9
Prupe.8G158800 Prunus persica HOM05D004759 ORTHO05D005722 5.1e-109 398.3 288 69.4
COL.COLO4_17240 Corchorus olitorius HOM05D004759 ORTHO05D005722 6.7e-109 397.9 288 69.8
Duzib132G0429 Durio zibethinus HOM05D004759 ORTHO05D005722 6.7e-109 397.9 287 71.1
PGR042G1303 Punica granatum HOM05D004759 ORTHO05D005722 6.7e-109 397.9 292 68.2
Sabra09G0098000 Salix brachista HOM05D004759 ORTHO05D005722 8.8e-109 397.5 288 69.8
Cc02_g16670 Coffea canephora HOM05D004759 ORTHO05D005722 1.5e-108 396.7 287 69.7
Migut.B00161 Erythranthe guttata HOM05D004759 ORTHO05D005722 1.5e-108 396.7 285 69.8
CiPaw.06G125800 Carya illinoinensis HOM05D004759 ORTHO05D005722 2.5e-108 396.0 287 69.0
Gohir.D02G224000 Gossypium hirsutum HOM05D004759 ORTHO05D005722 4.3e-108 395.2 288 69.1
GSVIVG01024116001 Vitis vinifera HOM05D004759 ORTHO05D005722 5.7e-108 394.8 287 70.0
Ciclev10028685m.g Citrus clementina HOM05D004759 ORTHO05D005722 9.7e-108 394.0 288 69.1
Potri.004G166900 Populus trichocarpa HOM05D004759 ORTHO05D005722 9.7e-108 394.0 288 71.2
ClCG02G004370 Citrullus lanatus HOM05D004759 ORTHO05D005722 1.7e-107 393.3 288 69.4
Hma1.2p1_0032F.1_g019720 Hydrangea macrophylla HOM05D004759 ORTHO05D005722 6.3e-107 391.3 288 71.5
MELO3C013383.2 Cucumis melo HOM05D004759 ORTHO05D005722 1.8e-106 389.8 285 69.1
CsaV3_7G000740 Cucumis sativus L. HOM05D004759 ORTHO05D005722 3.1e-106 389.0 288 68.4
TAR376G0227 Trochodendron aralioides HOM05D004759 ORTHO05D005722 6.9e-106 387.9 288 68.4
arahy.Tifrunner.gnm1.ann1.8G8R7R Arachis hypogaea HOM05D004759 ORTHO05D005722 1.2e-105 387.1 291 68.4
Medtr4g075610 Medicago truncatula HOM05D004759 ORTHO05D005722 1.2e-105 387.1 286 68.5
TPR.G17153 Trifolium pratense HOM05D004759 ORTHO05D005722 1.2e-105 387.1 286 68.9
arahy.Tifrunner.gnm1.ann1.B05S7J Arachis hypogaea HOM05D004759 ORTHO05D005722 2.0e-105 386.3 291 68.4
Actinidia20479 Actinidia chinensis HOM05D004759 ORTHO05D005722 3.4e-105 385.6 290 69.0
CiPaw.05G076100 Carya illinoinensis HOM05D004759 ORTHO05D005722 3.4e-105 385.6 288 68.4
FAN24G2027 Fragaria x ananassa HOM05D004759 ORTHO05D005722 3.4e-105 385.6 290 69.0
Sed0015502 Sechium edule HOM05D004759 ORTHO05D005722 3.4e-105 385.6 288 68.4
Ca_18993_v3 Cicer arietinum L. HOM05D004759 ORTHO05D005722 4.5e-105 385.2 286 69.6
MD05G1114400 Malus domestica HOM05D004759 ORTHO05D005722 5.9e-105 384.8 286 67.5
RcHm_v2.0_Chr6g0245891 Rosa chinensis HOM05D004759 ORTHO05D005722 7.7e-105 384.4 284 69.7
Atru.chr5.3204 Acer truncatum HOM05D004759 ORTHO05D005722 1.3e-104 383.6 289 66.4
FvH4_2g02210 Fragaria vesca HOM05D004759 ORTHO05D005722 1.3e-104 383.6 290 68.6
Glyma.11G097500 Glycine max HOM05D004759 ORTHO05D005722 1.3e-104 383.6 288 69.1
FAN15G1889 Fragaria x ananassa HOM05D004759 ORTHO05D005722 2.9e-104 382.5 290 68.6
Lsat_1_v5_gn_8_126780 Lactuca sativa HOM05D004759 ORTHO05D005722 3.8e-104 382.1 286 67.5
VMungo1127G1183 Vigna mungo HOM05D004759 ORTHO05D005722 3.8e-104 382.1 289 68.9
Phvul.011G025600 Phaseolus vulgaris HOM05D004759 ORTHO05D005722 5.0e-104 381.7 288 68.8
SalBow6G6339 Salvia bowleyana HOM05D004759 ORTHO05D005722 5.0e-104 381.7 283 66.4
MD10G1116400 Malus domestica HOM05D004759 ORTHO05D005722 1.1e-103 380.6 287 67.9
Haze_02210 Corylus avellana HOM05D004759 ORTHO05D005722 1.4e-103 380.2 283 68.6
Glyma.06G005900 Glycine max HOM05D004759 ORTHO05D005722 2.5e-103 379.4 287 65.9
SGA_v2.0_scaffold32G13244 Striga asiatica HOM05D004759 ORTHO05D005722 7.2e-103 377.9 286 68.2
FAN27G2697 Fragaria x ananassa HOM05D004759 ORTHO05D005722 1.6e-102 376.7 290 67.9
FAN20G1238 Fragaria x ananassa HOM05D004759 ORTHO05D005722 2.1e-102 376.3 290 67.9
ECA233G0594 Erigeron canadensis HOM05D004759 ORTHO05D005722 4.7e-102 375.2 286 66.8
HanXRQChr17g0555191 Helianthus annuus HOM05D004759 ORTHO05D005722 6.1e-102 374.8 286 67.1
Lj1g0004015 Lotus japonicus HOM05D004759 ORTHO05D005722 1.8e-101 373.2 289 65.1
MSTRG.5434 Avicennia marina HOM05D004759 ORTHO05D005722 2.3e-101 372.9 278 66.5
Gorai.008G032900 Gossypium raimondii HOM05D004759 ORTHO05D005722 3.0e-101 372.5 283 66.8
TWI31G1308 Tripterygium wilfordii HOM05D004759 ORTHO05D005722 5.1e-101 371.7 288 67.0
Phvul.009G000900 Phaseolus vulgaris HOM05D004759 ORTHO05D005722 2.0e-100 369.8 287 64.1
Psat7g178120 Pisum sativum HOM05D004759 ORTHO05D005722 3.3e-100 369.0 289 65.1
MSTRG.16864 Avicennia marina HOM05D004759 ORTHO05D005722 5.7e-100 368.2 287 64.5
VMungo1309G1106 Vigna mungo HOM05D004759 ORTHO05D005722 1.3e-99 367.1 287 64.8
Glyma.04G006200 Glycine max HOM05D004759 ORTHO05D005722 1.7e-99 366.7 288 63.5
EL10Ac9g21461 Beta vulgaris HOM05D004759 ORTHO05D005722 2.2e-99 366.3 290 63.1
AUR62013108 Chenopodium quinoa HOM05D004759 ORTHO05D005722 2.4e-98 362.8 290 63.8
Lalb_Chr19g0139561 Lupinus albus HOM05D004759 ORTHO05D005722 4.1e-98 362.1 289 64.4
THA.LOC104824783 Tarenaya hassleriana HOM05D004759 ORTHO05D005722 2.0e-97 359.8 283 65.0
PSO170G3415 Papaver somniferum HOM05D004759 ORTHO05D005722 3.5e-97 359.0 290 62.4
AL7G10680 Arabidopsis lyrata HOM05D004759 ORTHO05D005722 5.9e-97 358.2 284 61.3
AUR62010113 Chenopodium quinoa HOM05D004759 ORTHO05D005722 5.9e-97 358.2 290 63.8
PSO700G0005 Papaver somniferum HOM05D004759 ORTHO05D005722 5.9e-97 358.2 290 62.1
CARHR247920 Cardamine hirsuta HOM05D004759 ORTHO05D005722 1.0e-96 357.5 284 62.0
MBI05_g15352_MAGBIO Magnolia biondii HOM05D004759 ORTHO05D005722 1.7e-96 356.7 295 62.0
Ah.01g009490 Amaranthus hybridus HOM05D004759 ORTHO05D005722 3.2e-95 352.4 290 61.0
AT4G38810 Arabidopsis thaliana HOM05D004759 ORTHO05D005722 5.5e-95 351.7 291 60.5
MSTRG.27666 Avicennia marina HOM05D004759 ORTHO05D005722 9.4e-95 350.9 286 60.5
Sc18g0006740 Simmondsia chinensis HOM05D004759 ORTHO05D005722 2.7e-94 349.4 289 61.9
A06p48900 Brassica napus HOM05D004759 ORTHO05D005722 3.9e-93 345.5 285 62.1
BraA06t27758Z Brassica rapa HOM05D004759 ORTHO05D005722 3.9e-93 345.5 285 62.1
Ca_15318_v3 Cicer arietinum L. HOM05D004759 ORTHO05D005722 8.8e-93 344.4 285 62.1
BcaNung01966 Brassica carinata HOM05D004759 ORTHO05D005722 3.3e-92 342.4 285 61.1
Medtr3g117680 Medicago truncatula HOM05D004759 ORTHO05D005722 3.3e-92 342.4 288 60.8
Hund06394 Selenicereus undatus HOM05D004759 ORTHO05D005722 5.7e-92 341.7 291 57.7
Thhalv10025463m.g Eutrema salsugineum HOM05D004759 ORTHO05D005722 1.7e-91 340.1 290 61.0
C07p63570 Brassica napus HOM05D004759 ORTHO05D005722 2.2e-91 339.7 292 60.6
BolC7t46770H Brassica oleracea HOM05D004759 ORTHO05D005722 2.2e-91 339.7 292 60.6
Aa31LG6G16400 Aethionema arabicum HOM05D004759 ORTHO05D005722 4.8e-91 338.6 287 58.9
Manes.11G078000 Manihot esculenta HOM05D004759 ORTHO05D005722 6.3e-91 338.2 251 67.7
Nitab4.5_0000980g0350 Nicotiana tabacum HOM05D004759 ORTHO05D005722 6.3e-91 338.2 289 63.0
Sp7g37010 Schrenkiella parvula HOM05D004759 ORTHO05D005722 8.2e-91 337.8 292 58.9
Psat5g003440 Pisum sativum HOM05D004759 ORTHO05D005722 3.1e-90 335.9 287 60.6
Gohir.D12G032200 Gossypium hirsutum HOM05D004759 ORTHO05D005722 1.2e-89 334.0 255 67.1
TPR.G38567 Trifolium pratense HOM05D004759 ORTHO05D005722 2.0e-89 333.2 287 58.9
Duzib052G1250 Durio zibethinus HOM05D004759 ORTHO05D005722 3.5e-89 332.4 258 67.4
TAR628G0309 Trochodendron aralioides HOM05D004759 ORTHO05D005722 2.2e-88 329.7 279 62.7
Hund00052 Selenicereus undatus HOM05D004759 ORTHO05D005722 2.9e-88 329.3 304 56.6
Gohir.A12G040100 Gossypium hirsutum HOM05D004759 ORTHO05D005722 5.5e-87 325.1 255 65.5
Actinidia00585 Actinidia chinensis HOM05D004759 ORTHO05D005722 2.7e-86 322.8 225 73.3
Sed0015287 Sechium edule HOM05D004759 ORTHO05D005722 6.1e-86 321.6 257 63.8
Os10g0177200 Oryza sativa ssp. japonica HOM05D004759 ORTHO05D005722 9.7e-84 314.3 289 56.1
Sed0012827 Sechium edule HOM05D000600 ORTHO05D000432 3.8e-80 302.4 241 63.5
Carub.0007s0066 Capsella rubella HOM05D004759 ORTHO05D005722 3.2e-79 299.3 253 58.9
ATR0481G015 Amborella trichopoda HOM05D004759 ORTHO05D005722 5.5e-79 298.5 277 54.5
Nn5g30165 Nelumbo nucifera HOM05D004759 ORTHO05D005722 1.2e-78 297.4 245 62.0
SHI05655 Sapria himalayana HOM05D004759 ORTHO05D005722 3.6e-78 295.8 313 52.4
arahy.Tifrunner.gnm1.ann1.R4GM9V Arachis hypogaea HOM05D004759 ORTHO05D005722 8.0e-78 294.7 290 55.9
unitig_899.g15603 Utricularia gibba HOM05D004759 ORTHO05D005722 2.6e-76 289.7 285 52.3
Zm00001eb224230 Zea mays HOM05D004759 ORTHO05D005722 4.4e-76 288.9 303 51.2
arahy.Tifrunner.gnm1.ann1.ZR7FTB Arachis hypogaea HOM05D004759 ORTHO05D005722 9.8e-76 287.7 258 60.5
Aqoxy5G01775 Aquilegia oxysepala HOM05D004759 ORTHO05D005722 1.7e-75 287.0 286 52.1
CDE02G2774 Ceratophyllum demersum HOM05D004759 ORTHO05D005722 1.7e-75 287.0 287 52.3
Nn1g05877 Nelumbo nucifera HOM05D004759 ORTHO05D005722 2.7e-73 279.6 290 55.5
Oeu055645.1 Olea europaea HOM05D004759 ORTHO05D005722 1.7e-72 276.9 255 54.5
Os03g0250000 Oryza sativa ssp. japonica HOM05D004759 ORTHO05D005722 1.2e-70 270.8 279 49.8
Dinv41981 Davidia involucrata HOM05D004759 ORTHO05D005722 2.1e-70 270.0 181 75.7
Oeu002958.2 Olea europaea HOM05D004759 ORTHO05D005722 2.6e-68 263.1 255 53.7
Glyma.12G023500 Glycine max HOM05D004759 ORTHO05D005722 1.2e-62 244.2 185 68.6
Zm00001eb010730 Zea mays HOM05D004759 ORTHO05D005722 6.8e-61 238.4 285 46.0
HPP92_003533 Vanilla planifolia HOM05D004759 ORTHO05D005722 4.4e-60 235.7 286 47.6
SEGI_06358 Sequoiadendron giganteum HOM05D004759 ORTHO05D005722 5.4e-58 228.8 279 43.0
SEGI_27774 Sequoiadendron giganteum HOM05D004759 ORTHO05D005722 1.6e-57 227.3 278 43.2
arahy.Tifrunner.gnm1.ann1.T5CB16 Arachis hypogaea HOM05D004759 ORTHO05D005722 2.0e-57 226.9 188 63.8
HPP92_007135 Vanilla planifolia HOM05D004759 ORTHO05D005722 2.2e-51 206.8 253 45.5
Mapoly0103s0051 Marchantia polymorpha HOM05D004759 ORTHO05D005722 1.2e-46 191.0 274 35.0
SMO169G0202 Selaginella moellendorffii HOM05D004759 ORTHO05D005722 1.3e-43 181.0 282 34.4
Cc02_g16650 Coffea canephora HOM05D004759 ORTHO05D005722 1.7e-40 170.6 145 63.4
unitig_21.g20808 Utricularia gibba HOM05D004759 ORTHO05D005722 5.2e-37 159.1 183 50.8
Pp3c5_21520 Physcomitrium patens HOM05D004759 ORTHO05D005722 3.4e-36 156.4 219 40.6
SEGI_21972 Sequoiadendron giganteum HOM05D004759 ORTHO05D005722 7.6e-36 155.2 254 32.3
PSO675G1610 Papaver somniferum HOM05D004759 ORTHO05D005722 1.7e-35 154.1 269 37.2
PSO541G2336 Papaver somniferum HOM05D004759 ORTHO05D005722 3.8e-35 152.9 274 37.6
Ciclev10030375m.g Citrus clementina HOM05D004759 ORTHO05D005722 3.2e-26 123.2 141 48.2
DCAR_026360 Daucus carota HOM05D004759 ORTHO05D005722 5.1e-24 115.9 88 64.8
SEGI_16256 Sequoiadendron giganteum HOM05D004759 ORTHO05D005722 3.1e-21 106.7 134 41.0
HPP92_003524 Vanilla planifolia HOM05D004759 ORTHO05D005722 3.8e-19 99.8 71 66.2
unitig_21.g20809 Utricularia gibba HOM05D004759 ORTHO05D005722 2.1e-17 94.0 75 60.0
Cpa.g.sc37.205 Carica papaya HOM05D004759 ORTHO05D005722 3.5e-17 93.2 178 35.4
Thecc.05G283900 Theobroma cacao HOM05D006821 ORTHO05D008740 1.3e-16 91.3 256 24.2
CBR_g10979 Chara braunii HOM05D006821 ORTHO05D008740 2.5e-15 87.0 274 25.5
Duzib177G0830 Durio zibethinus HOM05D006821 ORTHO05D008740 1.6e-14 84.3 256 23.8
CDE07G0065 Ceratophyllum demersum HOM05D006821 ORTHO05D008740 2.1e-14 84.0 265 26.0
Gohir.A13G104500 Gossypium hirsutum HOM05D006821 ORTHO05D008740 6.2e-14 82.4 256 23.0
Potri.013G040500 Populus trichocarpa HOM05D006821 ORTHO05D008740 8.1e-14 82.0 254 24.8
Oeu046121.1 Olea europaea HOM05D004759 ORTHO05D005722 1.1e-13 81.6 65 63.1
Peaxi162Scf00282g00328 Petunia axillaris HOM05D006821 ORTHO05D008740 1.4e-13 81.3 269 24.9
Gohir.D13G107900 Gossypium hirsutum HOM05D006821 ORTHO05D008740 1.8e-13 80.9 256 22.7
Gorai.013G120900 Gossypium raimondii HOM05D006821 ORTHO05D008740 2.4e-13 80.5 256 22.7
Lj1g0025723 Lotus japonicus HOM05D006821 ORTHO05D008740 4.0e-13 79.7 250 26.4
Duzib128G0425 Durio zibethinus HOM05D006821 ORTHO05D008740 6.9e-13 79.0 262 24.0
Cpa.g.sc117.86 Carica papaya HOM05D006821 ORTHO05D008740 9.0e-13 78.6 252 26.6
Sopen01g041020 Solanum pennellii HOM05D006821 ORTHO05D008740 1.2e-12 78.2 255 25.9
Manes.08G134300 Manihot esculenta HOM05D006821 ORTHO05D008740 2.0e-12 77.4 254 24.0
Solyc01g097350.4 Solanum lycopersicum HOM05D006821 ORTHO05D008740 2.0e-12 77.4 256 25.8
Aqoxy2G03492 Aquilegia oxysepala HOM05D006821 ORTHO05D008740 5.8e-12 75.9 253 24.5
THA.LOC104821676 Tarenaya hassleriana HOM05D006821 ORTHO05D008740 7.6e-12 75.5 246 23.2
Potri.005G052900 Populus trichocarpa HOM05D006821 ORTHO05D008740 1.7e-11 74.3 261 22.6
Manes.09G153500 Manihot esculenta HOM05D006821 ORTHO05D008740 2.9e-11 73.6 241 24.5
Eucgr.H04340 Eucalyptus grandis HOM05D006821 ORTHO05D008740 6.5e-11 72.4 247 24.7
BcaC04g23721 Brassica carinata HOM05D006821 ORTHO05D008740 1.1e-10 71.6 256 24.6
C09p05380 Brassica napus HOM05D006821 ORTHO05D008740 1.1e-10 71.6 256 24.6
ClCG02G016590 Citrullus lanatus HOM05D006821 ORTHO05D008740 5.5e-10 69.3 267 22.5
Glyma.03G246900 Glycine max HOM05D006821 ORTHO05D008740 1.6e-09 67.8 247 25.9
AagrBONN_evm.TU.Sc2ySwM_228.4858 Anthoceros agrestis HOM05D006821 ORTHO05D007268 2.1e-09 67.4 247 21.1
Mapoly0083s0056 Marchantia polymorpha HOM05D006821 ORTHO05D008740 6.0e-09 65.9 194 23.7
Sed0012709 Sechium edule HOM05D006821 ORTHO05D008740 7.9e-09 65.5 257 23.7
SMO259G0008 Selaginella moellendorffii HOM05D006821 ORTHO05D008740 2.5e-07 60.5 227 22.0


User provided reference genes

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