Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02239 Vaccinium macrocarpon HOM05D004759 ORTHO05D005722 1.2e-46 189.5 96 100.0
vmacro22691 Vaccinium macrocarpon HOM05D004759 ORTHO05D005722 1.7e-40 169.1 86 100.0
Rhsim11G0187000 Rhododendron simsii HOM05D004759 ORTHO05D005722 5.2e-34 147.5 86 90.7
Cfa005166 Carpinus fangiana HOM05D004759 ORTHO05D005722 1.9e-28 129.0 83 77.1
Lj5A186G40 Lonicera japonica HOM05D004759 ORTHO05D005722 1.9e-28 129.0 83 77.1
Potri.004G166900 Populus trichocarpa HOM05D004759 ORTHO05D005722 1.9e-28 129.0 71 85.9
QL11p047309 Quercus lobata HOM05D004759 ORTHO05D005722 1.9e-28 129.0 80 82.5
TWI79G0483 Tripterygium wilfordii HOM05D004759 ORTHO05D005722 1.9e-28 129.0 81 80.2
CiPaw.06G125800 Carya illinoinensis HOM05D004759 ORTHO05D005722 2.5e-28 128.6 86 74.4
VMungo1309G1106 Vigna mungo HOM05D004759 ORTHO05D005722 5.6e-28 127.5 86 73.3
CANSAT25G1906 Cannabis sativa HOM05D004759 ORTHO05D005722 7.3e-28 127.1 78 78.2
Ciclev10030375m.g Citrus clementina HOM05D004759 ORTHO05D005722 9.5e-28 126.7 80 75.0
Prupe.8G158800 Prunus persica HOM05D004759 ORTHO05D005722 9.5e-28 126.7 76 80.3
Haze_02210 Corylus avellana HOM05D004759 ORTHO05D005722 1.2e-27 126.3 82 79.3
Potri.009G127800 Populus trichocarpa HOM05D004759 ORTHO05D005722 1.2e-27 126.3 89 71.9
arahy.Tifrunner.gnm1.ann1.8G8R7R Arachis hypogaea HOM05D004759 ORTHO05D005722 1.6e-27 125.9 71 84.5
Nn1g05877 Nelumbo nucifera HOM05D004759 ORTHO05D005722 1.6e-27 125.9 74 82.4
CiPaw.05G076100 Carya illinoinensis HOM05D004759 ORTHO05D005722 2.8e-27 125.2 80 78.8
Phvul.009G000900 Phaseolus vulgaris HOM05D004759 ORTHO05D005722 2.8e-27 125.2 86 72.1
TAR376G0227 Trochodendron aralioides HOM05D004759 ORTHO05D005722 2.8e-27 125.2 84 75.0
Dinv41981 Davidia involucrata HOM05D004759 ORTHO05D005722 3.6e-27 124.8 77 81.8
Lj1g0004015 Lotus japonicus HOM05D004759 ORTHO05D005722 6.2e-27 124.0 83 74.7
arahy.Tifrunner.gnm1.ann1.B05S7J Arachis hypogaea HOM05D004759 ORTHO05D005722 8.0e-27 123.6 71 83.1
Ciclev10028685m.g Citrus clementina HOM05D004759 ORTHO05D005722 8.0e-27 123.6 83 73.5
SGA_v2.0_scaffold32G13244 Striga asiatica HOM05D004759 ORTHO05D005722 8.0e-27 123.6 86 72.1
Duzib132G0429 Durio zibethinus HOM05D004759 ORTHO05D005722 1.1e-26 123.2 78 76.9
FAN20G1238 Fragaria x ananassa HOM05D004759 ORTHO05D005722 1.4e-26 122.9 73 80.8
RcHm_v2.0_Chr6g0245891 Rosa chinensis HOM05D004759 ORTHO05D005722 1.4e-26 122.9 73 83.6
Actinidia00584 Actinidia chinensis HOM05D004759 ORTHO05D005722 1.8e-26 122.5 68 86.8
COL.COLO4_17240 Corchorus olitorius HOM05D004759 ORTHO05D005722 1.8e-26 122.5 82 73.2
FvH4_2g02210 Fragaria vesca HOM05D004759 ORTHO05D005722 1.8e-26 122.5 73 82.2
FAN15G1889 Fragaria x ananassa HOM05D004759 ORTHO05D005722 1.8e-26 122.5 73 82.2
FAN27G2697 Fragaria x ananassa HOM05D004759 ORTHO05D005722 1.8e-26 122.5 73 82.2
Manes.04G079000 Manihot esculenta HOM05D004759 ORTHO05D005722 1.8e-26 122.5 87 72.4
Hma1.2p1_0032F.1_g019720 Hydrangea macrophylla HOM05D004759 ORTHO05D005722 2.3e-26 122.1 81 75.3
Peaxi162Scf00362g01041 Petunia axillaris HOM05D004759 ORTHO05D005722 2.3e-26 122.1 72 81.9
Sabra09G0098000 Salix brachista HOM05D004759 ORTHO05D005722 2.3e-26 122.1 71 80.3
CAN.G588.16 Capsicum annuum HOM05D004759 ORTHO05D005722 3.1e-26 121.7 75 77.3
Glyma.04G006200 Glycine max HOM05D004759 ORTHO05D005722 3.1e-26 121.7 76 76.3
Sabra04G0112000 Salix brachista HOM05D004759 ORTHO05D005722 3.1e-26 121.7 84 71.4
Lalb_Chr19g0139561 Lupinus albus HOM05D004759 ORTHO05D005722 4.0e-26 121.3 71 80.3
PGSC0003DMG400001638 Solanum tuberosum HOM05D004759 ORTHO05D005722 4.0e-26 121.3 83 72.3
Thecc.02G068600 Theobroma cacao HOM05D004759 ORTHO05D005722 4.0e-26 121.3 78 75.6
FAN24G2027 Fragaria x ananassa HOM05D004759 ORTHO05D005722 5.2e-26 120.9 73 80.8
Gohir.A03G202700 Gossypium hirsutum HOM05D004759 ORTHO05D005722 5.2e-26 120.9 78 76.9
Gohir.D02G224000 Gossypium hirsutum HOM05D004759 ORTHO05D005722 5.2e-26 120.9 78 76.9
Gorai.005G251800 Gossypium raimondii HOM05D004759 ORTHO05D005722 5.2e-26 120.9 78 76.9
Sc18g0006740 Simmondsia chinensis HOM05D004759 ORTHO05D005722 6.8e-26 120.6 72 80.6
Glyma.06G005900 Glycine max HOM05D004759 ORTHO05D005722 8.9e-26 120.2 76 75.0
Glyma.11G097500 Glycine max HOM05D004759 ORTHO05D005722 8.9e-26 120.2 84 71.4
Nitab4.5_0000283g0200 Nicotiana tabacum HOM05D004759 ORTHO05D005722 8.9e-26 120.2 72 80.6
Nitab4.5_0000980g0350 Nicotiana tabacum HOM05D004759 ORTHO05D005722 8.9e-26 120.2 72 80.6
Solyc01g111040.4 Solanum lycopersicum HOM05D004759 ORTHO05D005722 8.9e-26 120.2 75 77.3
Sopen01g053100 Solanum pennellii HOM05D004759 ORTHO05D005722 8.9e-26 120.2 75 77.3
Medtr3g117680 Medicago truncatula HOM05D004759 ORTHO05D005722 1.5e-25 119.4 74 75.7
VMungo1127G1183 Vigna mungo HOM05D004759 ORTHO05D005722 2.6e-25 118.6 87 70.1
PSO700G0005 Papaver somniferum HOM05D004759 ORTHO05D005722 4.4e-25 117.9 76 75.0
Phvul.011G025600 Phaseolus vulgaris HOM05D004759 ORTHO05D005722 4.4e-25 117.9 82 72.0
Ca_15318_v3 Cicer arietinum L. HOM05D004759 ORTHO05D005722 5.8e-25 117.5 74 75.7
HanXRQChr17g0555191 Helianthus annuus HOM05D004759 ORTHO05D005722 5.8e-25 117.5 75 77.3
Ca_18993_v3 Cicer arietinum L. HOM05D004759 ORTHO05D005722 7.5e-25 117.1 89 69.7
EL10Ac9g21461 Beta vulgaris HOM05D004759 ORTHO05D005722 9.8e-25 116.7 71 80.3
TPR.G38567 Trifolium pratense HOM05D004759 ORTHO05D005722 9.8e-25 116.7 73 75.3
Eucgr.I01368 Eucalyptus grandis HOM05D004759 ORTHO05D005722 1.3e-24 116.3 77 72.7
Lsat_1_v5_gn_8_126780 Lactuca sativa HOM05D004759 ORTHO05D005722 1.3e-24 116.3 83 74.7
PSO170G3415 Papaver somniferum HOM05D004759 ORTHO05D005722 1.3e-24 116.3 76 73.7
TPR.G17153 Trifolium pratense HOM05D004759 ORTHO05D005722 1.3e-24 116.3 83 71.1
AUR62010113 Chenopodium quinoa HOM05D004759 ORTHO05D005722 1.7e-24 115.9 71 80.3
PGR042G1303 Punica granatum HOM05D004759 ORTHO05D005722 1.7e-24 115.9 80 68.8
AUR62013108 Chenopodium quinoa HOM05D004759 ORTHO05D005722 2.9e-24 115.2 71 80.3
Duzib248G0603 Durio zibethinus HOM05D004759 ORTHO05D005722 2.9e-24 115.2 77 72.7
Medtr4g075610 Medicago truncatula HOM05D004759 ORTHO05D005722 2.9e-24 115.2 87 67.8
Sed0015502 Sechium edule HOM05D004759 ORTHO05D005722 4.9e-24 114.4 73 76.7
ECA233G0594 Erigeron canadensis HOM05D004759 ORTHO05D005722 6.4e-24 114.0 71 78.9
Atru.chr5.3204 Acer truncatum HOM05D004759 ORTHO05D005722 8.3e-24 113.6 79 74.7
Psat7g178120 Pisum sativum HOM05D004759 ORTHO05D005722 8.3e-24 113.6 70 77.1
BraA06t27758Z Brassica rapa HOM05D004759 ORTHO05D005722 1.1e-23 113.2 75 72.0
MD05G1114400 Malus domestica HOM05D004759 ORTHO05D005722 1.1e-23 113.2 82 69.5
A06p48900 Brassica napus HOM05D004759 ORTHO05D005722 1.4e-23 112.8 69 78.3
CARHR247920 Cardamine hirsuta HOM05D004759 ORTHO05D005722 1.4e-23 112.8 76 71.1
ClCG02G004370 Citrullus lanatus HOM05D004759 ORTHO05D005722 1.4e-23 112.8 82 69.5
Cpa.g.sc37.205 Carica papaya HOM05D004759 ORTHO05D005722 2.4e-23 112.1 78 73.1
SalBow6G6339 Salvia bowleyana HOM05D004759 ORTHO05D005722 2.4e-23 112.1 70 80.0
AL7G10680 Arabidopsis lyrata HOM05D004759 ORTHO05D005722 4.1e-23 111.3 70 75.7
AT4G38810 Arabidopsis thaliana HOM05D004759 ORTHO05D005722 4.1e-23 111.3 70 75.7
C07p63570 Brassica napus HOM05D004759 ORTHO05D005722 4.1e-23 111.3 75 70.7
BolC7t46770H Brassica oleracea HOM05D004759 ORTHO05D005722 4.1e-23 111.3 75 70.7
MBI05_g15352_MAGBIO Magnolia biondii HOM05D004759 ORTHO05D005722 4.1e-23 111.3 71 74.6
Cc02_g16670 Coffea canephora HOM05D004759 ORTHO05D005722 7.1e-23 110.5 62 85.5
Sp7g37010 Schrenkiella parvula HOM05D004759 ORTHO05D005722 9.2e-23 110.2 70 74.3
Aa31LG6G16400 Aethionema arabicum HOM05D004759 ORTHO05D005722 1.2e-22 109.8 75 70.7
MSTRG.27666 Avicennia marina HOM05D004759 ORTHO05D005722 1.2e-22 109.8 81 67.9
Psat5g003440 Pisum sativum HOM05D004759 ORTHO05D005722 2.7e-22 108.6 72 70.8
TWI31G1308 Tripterygium wilfordii HOM05D004759 ORTHO05D005722 3.5e-22 108.2 73 75.3
Thhalv10025463m.g Eutrema salsugineum HOM05D004759 ORTHO05D005722 4.6e-22 107.8 75 69.3
MELO3C013383.2 Cucumis melo HOM05D004759 ORTHO05D005722 1.7e-21 105.9 80 65.0
THA.LOC104824783 Tarenaya hassleriana HOM05D004759 ORTHO05D005722 2.3e-21 105.5 70 71.4
Ah.01g009490 Amaranthus hybridus HOM05D004759 ORTHO05D005722 3.0e-21 105.1 78 70.5
SHI05655 Sapria himalayana HOM05D004759 ORTHO05D005722 3.0e-21 105.1 70 71.4
GSVIVG01024116001 Vitis vinifera HOM05D004759 ORTHO05D005722 5.1e-21 104.4 62 82.3
MSTRG.16864 Avicennia marina HOM05D004759 ORTHO05D005722 6.6e-21 104.0 86 64.0
CsaV3_7G000740 Cucumis sativus L. HOM05D004759 ORTHO05D005722 6.6e-21 104.0 73 68.5
CDE02G2774 Ceratophyllum demersum HOM05D004759 ORTHO05D005722 3.3e-20 101.7 75 66.7
MD10G1116400 Malus domestica HOM05D004759 ORTHO05D005722 3.3e-20 101.7 62 75.8
Nn5g30165 Nelumbo nucifera HOM05D004759 ORTHO05D005722 7.3e-20 100.5 62 80.6
MSTRG.5434 Avicennia marina HOM05D004759 ORTHO05D005722 9.5e-20 100.1 70 71.4
ATR0481G015 Amborella trichopoda HOM05D004759 ORTHO05D005722 2.1e-19 99.0 75 62.7
TAR628G0309 Trochodendron aralioides HOM05D004759 ORTHO05D005722 2.8e-19 98.6 63 71.4
unitig_899.g15603 Utricularia gibba HOM05D004759 ORTHO05D005722 2.3e-18 95.5 80 60.0
HPP92_003524 Vanilla planifolia HOM05D004759 ORTHO05D005722 4.0e-18 94.7 79 59.5
HPP92_003533 Vanilla planifolia HOM05D004759 ORTHO05D005722 4.0e-18 94.7 77 62.3
Zm00001eb224230 Zea mays HOM05D004759 ORTHO05D005722 8.9e-18 93.6 79 58.2
Os10g0177200 Oryza sativa ssp. japonica HOM05D004759 ORTHO05D005722 1.2e-17 93.2 69 63.8
SEGI_06358 Sequoiadendron giganteum HOM05D004759 ORTHO05D005722 9.9e-17 90.1 69 62.3
SEGI_27774 Sequoiadendron giganteum HOM05D004759 ORTHO05D005722 3.7e-16 88.2 69 59.4
Hund06394 Selenicereus undatus HOM05D004759 ORTHO05D005722 8.3e-16 87.0 79 62.0
Pp3c5_21520 Physcomitrium patens HOM05D004759 ORTHO05D005722 1.5e-12 76.3 69 47.8
Zm00001eb010730 Zea mays HOM05D004759 ORTHO05D005722 4.3e-12 74.7 52 69.2
SMO169G0202 Selaginella moellendorffii HOM05D004759 ORTHO05D005722 2.8e-11 72.0 69 52.2
Mapoly0103s0051 Marchantia polymorpha HOM05D004759 ORTHO05D005722 3.6e-11 71.6 68 51.5
Ah.13g066420 Amaranthus hybridus HOM05D004759 ORTHO05D005722 5.2e-10 67.8 46 71.7
BcaNung01966 Brassica carinata HOM05D004759 ORTHO05D005722 9.3e-07 57.0 75 41.3


User provided reference genes

Program Settings