Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02120 Vaccinium macrocarpon HOM05D003825 ORTHO05D004491 3.2e-130 468.4 227 100.0
vmacro02122 Vaccinium macrocarpon HOM05D003825 ORTHO05D004491 1.6e-70 270.0 224 66.1
vmacro02113 Vaccinium macrocarpon HOM05D003825 ORTHO05D004491 5.5e-58 228.4 119 89.9
CSS0004129 Camellia sinensis var. sinensis HOM05D003825 ORTHO05D004491 1.6e-57 226.9 230 57.4
Rhsim11G0176400 Rhododendron simsii HOM05D003825 ORTHO05D004491 2.7e-57 226.1 119 89.1
Glyma.04G013100 Glycine max HOM05D003825 ORTHO05D004491 7.9e-57 224.6 229 57.2
CSS0007779 Camellia sinensis var. sinensis HOM05D003825 ORTHO05D004491 1.0e-56 224.2 230 56.5
Hund06228 Selenicereus undatus HOM05D003825 ORTHO05D004491 1.0e-56 224.2 230 55.7
Lalb_Chr08g0246621 Lupinus albus HOM05D003825 ORTHO05D004491 1.4e-56 223.8 229 57.6
ATR0733G256 Amborella trichopoda HOM05D003825 ORTHO05D004491 2.3e-56 223.0 226 55.3
Psat5g006200 Pisum sativum HOM05D003825 ORTHO05D004491 2.3e-56 223.0 226 56.6
TPR.G38203 Trifolium pratense HOM05D003825 ORTHO05D004491 3.9e-56 222.2 226 56.6
Lsat_1_v5_gn_5_118640 Lactuca sativa HOM05D003825 ORTHO05D004491 5.1e-56 221.9 226 57.1
Glyma.06G013000 Glycine max HOM05D003825 ORTHO05D004491 6.7e-56 221.5 230 56.5
DCAR_001583 Daucus carota HOM05D003825 ORTHO05D004491 1.1e-55 220.7 230 54.8
Sc18g0004560 Simmondsia chinensis HOM05D003825 ORTHO05D004491 1.1e-55 220.7 138 76.1
Ciclev10028655m.g Citrus clementina HOM05D003825 ORTHO05D004491 1.5e-55 220.3 119 87.4
TAR381G1531 Trochodendron aralioides HOM05D003825 ORTHO05D004491 2.0e-55 219.9 226 55.8
Aa31LG2G16080 Aethionema arabicum HOM05D003825 ORTHO05D004491 2.5e-55 219.5 226 55.8
Rhsim05G0074800 Rhododendron simsii HOM05D003825 ORTHO05D004491 4.3e-55 218.8 119 85.7
Atru.chr5.3006 Acer truncatum HOM05D003825 ORTHO05D004491 5.7e-55 218.4 119 86.6
A03p62930 Brassica napus HOM05D003825 ORTHO05D004491 5.7e-55 218.4 226 54.0
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 5.7e-55 218.4 226 54.0
BraA03t15368Z Brassica rapa HOM05D003825 ORTHO05D004491 7.4e-55 218.0 226 54.0
Lsat_1_v5_gn_7_89161 Lactuca sativa HOM05D003825 ORTHO05D004491 7.4e-55 218.0 226 56.2
MD05G1067400 Malus domestica HOM05D003825 ORTHO05D004491 7.4e-55 218.0 230 55.2
C01p04290 Brassica napus HOM05D003825 ORTHO05D004491 1.3e-54 217.2 226 54.0
C07p60600 Brassica napus HOM05D003825 ORTHO05D004491 1.3e-54 217.2 226 53.5
Gohir.A03G194000 Gossypium hirsutum HOM05D003825 ORTHO05D004491 1.3e-54 217.2 119 84.9
Gohir.D02G215100 Gossypium hirsutum HOM05D003825 ORTHO05D004491 1.3e-54 217.2 119 84.9
Gorai.005G243000 Gossypium raimondii HOM05D003825 ORTHO05D004491 1.3e-54 217.2 119 84.9
Nitab4.5_0000557g0030 Nicotiana tabacum HOM05D003825 ORTHO05D004491 1.3e-54 217.2 239 51.9
Thecc.02G086200 Theobroma cacao HOM05D003825 ORTHO05D004491 1.3e-54 217.2 119 84.9
TAR376G0761 Trochodendron aralioides HOM05D003825 ORTHO05D004491 1.3e-54 217.2 226 54.9
Aqoxy6G01089 Aquilegia oxysepala HOM05D003825 ORTHO05D004491 1.7e-54 216.9 226 54.9
Duzib052G0149 Durio zibethinus HOM05D003825 ORTHO05D004491 1.7e-54 216.9 119 84.0
Potri.009G115300 Populus trichocarpa HOM05D003825 ORTHO05D004491 1.7e-54 216.9 119 86.6
CANSAT01G0308 Cannabis sativa HOM05D003825 ORTHO05D004491 2.2e-54 216.5 229 55.5
ECA234G4263 Erigeron canadensis HOM05D003825 ORTHO05D004491 2.2e-54 216.5 226 54.9
EL10Ac9g21730 Beta vulgaris HOM05D003825 ORTHO05D004491 2.8e-54 216.1 138 75.4
Duzib248G1446 Durio zibethinus HOM05D003825 ORTHO05D004491 2.8e-54 216.1 119 84.0
Potri.004G153700 Populus trichocarpa HOM05D003825 ORTHO05D004491 2.8e-54 216.1 119 86.6
A01p03980 Brassica napus HOM05D003825 ORTHO05D004491 3.7e-54 215.7 226 53.5
BolC1t00419H Brassica oleracea HOM05D003825 ORTHO05D004491 3.7e-54 215.7 226 53.5
BraA01t00386Z Brassica rapa HOM05D003825 ORTHO05D004491 3.7e-54 215.7 226 53.5
AUR62011330 Chenopodium quinoa HOM05D003825 ORTHO05D004491 3.7e-54 215.7 119 84.0
AUR62016731 Chenopodium quinoa HOM05D003825 ORTHO05D004491 3.7e-54 215.7 119 84.0
Lj9A369G66 Lonicera japonica HOM05D003825 ORTHO05D004491 4.8e-54 215.3 119 85.7
Nitab4.5_0000308g0050 Nicotiana tabacum HOM05D003825 ORTHO05D004491 4.8e-54 215.3 233 54.9
Sabra09G0088400 Salix brachista HOM05D003825 ORTHO05D004491 4.8e-54 215.3 119 85.7
Migut.B00242 Erythranthe guttata HOM05D003825 ORTHO05D004491 6.3e-54 214.9 119 84.9
COL.COLO4_25921 Corchorus olitorius HOM05D003825 ORTHO05D004491 8.2e-54 214.5 119 83.2
Sabra04G0102100 Salix brachista HOM05D003825 ORTHO05D004491 1.1e-53 214.2 119 85.7
Haze_02378 Corylus avellana HOM05D003825 ORTHO05D004491 1.4e-53 213.8 118 86.4
Thhalv10025475m.g Eutrema salsugineum HOM05D003825 ORTHO05D004491 1.4e-53 213.8 226 53.1
MBI16_g36555_MAGBIO Magnolia biondii HOM05D003825 ORTHO05D004491 1.4e-53 213.8 119 84.0
Manes.17G100500 Manihot esculenta HOM05D003825 ORTHO05D004491 1.4e-53 213.8 119 84.0
THA.LOC104804353 Tarenaya hassleriana HOM05D003825 ORTHO05D004491 1.4e-53 213.8 125 80.8
Cpa.g.sc62.142 Carica papaya HOM05D003825 ORTHO05D004491 1.8e-53 213.4 119 83.2
QL11p043433 Quercus lobata HOM05D003825 ORTHO05D004491 1.8e-53 213.4 119 85.7
SGA_v2.0_scaffold58G20541 Striga asiatica HOM05D003825 ORTHO05D004491 1.8e-53 213.4 230 54.3
AT4G34460 Arabidopsis thaliana HOM05D003825 ORTHO05D004491 2.4e-53 213.0 226 52.7
CARHR242280 Cardamine hirsuta HOM05D003825 ORTHO05D004491 2.4e-53 213.0 226 53.1
Glyma.11G118500 Glycine max HOM05D003825 ORTHO05D004491 2.4e-53 213.0 138 76.1
Sp7g32260 Schrenkiella parvula HOM05D003825 ORTHO05D004491 2.4e-53 213.0 226 52.7
GSVIVG01031958001 Vitis vinifera HOM05D003825 ORTHO05D004491 2.4e-53 213.0 119 84.0
Actinidia00520 Actinidia chinensis HOM05D003825 ORTHO05D004491 3.1e-53 212.6 119 84.0
Actinidia17819 Actinidia chinensis HOM05D003825 ORTHO05D004491 3.1e-53 212.6 119 83.2
Ah.01g006230 Amaranthus hybridus HOM05D003825 ORTHO05D004491 3.1e-53 212.6 119 82.4
Ca_15370_v3 Cicer arietinum L. HOM05D003825 ORTHO05D004491 3.1e-53 212.6 119 84.9
Glyma.12G043900 Glycine max HOM05D003825 ORTHO05D004491 3.1e-53 212.6 138 75.4
Hma1.2p1_0066F.1_g036470 Hydrangea macrophylla HOM05D003825 ORTHO05D004491 3.1e-53 212.6 119 84.0
Medtr3g116500 Medicago truncatula HOM05D003825 ORTHO05D004491 3.1e-53 212.6 119 84.9
Nn5g29575 Nelumbo nucifera HOM05D003825 ORTHO05D004491 3.1e-53 212.6 119 84.0
Actinidia27900 Actinidia chinensis HOM05D003825 ORTHO05D004491 4.1e-53 212.2 119 83.2
FvH4_2g08680 Fragaria vesca HOM05D003825 ORTHO05D004491 4.1e-53 212.2 119 84.0
FAN15G2119 Fragaria x ananassa HOM05D000080 ORTHO05D004491 4.1e-53 212.2 119 84.0
FAN27G3168 Fragaria x ananassa HOM05D000080 ORTHO05D004491 4.1e-53 212.2 119 84.0
Lj1g0010946 Lotus japonicus HOM05D003825 ORTHO05D004491 4.1e-53 212.2 119 84.9
Manes.15G164000 Manihot esculenta HOM05D003825 ORTHO05D004491 4.1e-53 212.2 119 83.2
Nn1g05027 Nelumbo nucifera HOM05D003825 ORTHO05D004491 4.1e-53 212.2 119 82.4
Phvul.011G045900 Phaseolus vulgaris HOM05D003825 ORTHO05D004491 4.1e-53 212.2 138 76.1
RcHm_v2.0_Chr6g0264111 Rosa chinensis HOM05D003825 ORTHO05D004491 4.1e-53 212.2 119 84.0
VMungo1127G1308 Vigna mungo HOM05D003825 ORTHO05D004491 4.1e-53 212.2 138 76.1
MSTRG.16803 Avicennia marina HOM05D003825 ORTHO05D004491 6.9e-53 211.5 119 83.2
Hma1.2p1_1375F.1_g279040 Hydrangea macrophylla HOM05D003825 ORTHO05D004491 6.9e-53 211.5 119 82.4
Duzib132G1223 Durio zibethinus HOM05D003825 ORTHO05D004491 9.1e-53 211.1 119 82.4
Prupe.8G098100 Prunus persica HOM05D003825 ORTHO05D004491 9.1e-53 211.1 119 84.9
Cc02_g17630 Coffea canephora HOM05D003825 ORTHO05D004491 1.2e-52 210.7 119 84.0
Nitab4.5_0004172g0080 Nicotiana tabacum HOM05D003825 ORTHO05D004491 1.2e-52 210.7 119 84.9
Carub.0007s0584 Capsella rubella HOM05D003825 ORTHO05D004491 1.5e-52 210.3 226 52.2
SalBow6G4765 Salvia bowleyana HOM05D003825 ORTHO05D004491 2.6e-52 209.5 119 83.2
SalBow6G5747 Salvia bowleyana HOM05D003825 ORTHO05D004491 2.6e-52 209.5 119 83.2
THA.LOC104807323 Tarenaya hassleriana HOM05D003825 ORTHO05D004491 2.6e-52 209.5 119 82.4
arahy.Tifrunner.gnm1.ann1.53VILX Arachis hypogaea HOM05D003825 ORTHO05D004491 3.4e-52 209.1 119 83.2
arahy.Tifrunner.gnm1.ann1.SA4SRM Arachis hypogaea HOM05D003825 ORTHO05D004491 3.4e-52 209.1 119 83.2
CiPaw.06G135900 Carya illinoinensis HOM05D003825 ORTHO05D004491 3.4e-52 209.1 119 83.2
ECA236G2533 Erigeron canadensis HOM05D003825 ORTHO05D004491 4.5e-52 208.8 119 83.2
Ah.01g019430 Amaranthus hybridus HOM05D003825 ORTHO05D004491 5.9e-52 208.4 119 80.7
Aqoxy5G01652 Aquilegia oxysepala HOM05D003825 ORTHO05D004491 7.7e-52 208.0 230 53.0
Os03g0669200 Oryza sativa ssp. japonica HOM05D003825 ORTHO05D004491 7.7e-52 208.0 125 78.4
SGA_v2.0_scaffold32G13163 Striga asiatica HOM05D003825 ORTHO05D004491 7.7e-52 208.0 226 52.7
TWI31G0251 Tripterygium wilfordii HOM05D003825 ORTHO05D004491 7.7e-52 208.0 119 83.2
MELO3C012527.2 Cucumis melo HOM05D003825 ORTHO05D004491 1.0e-51 207.6 119 82.4
Gohir.A13G034700 Gossypium hirsutum HOM05D003825 ORTHO05D004491 1.0e-51 207.6 119 81.5
Peaxi162Scf00684g00320 Petunia axillaris HOM05D003825 ORTHO05D004491 1.7e-51 206.8 119 82.4
Gohir.D13G033100 Gossypium hirsutum HOM05D003825 ORTHO05D004491 2.2e-51 206.5 119 80.7
Aa31LG8G13600 Aethionema arabicum HOM05D003825 ORTHO05D004491 2.9e-51 206.1 227 52.9
Gorai.013G037500 Gossypium raimondii HOM05D003825 ORTHO05D004491 2.9e-51 206.1 119 80.7
CsaV3_7G023510 Cucumis sativus L. HOM05D003825 ORTHO05D004491 3.8e-51 205.7 119 81.5
MD10G1077300 Malus domestica HOM05D003825 ORTHO05D004491 3.8e-51 205.7 119 82.4
Solyc01g109560.3 Solanum lycopersicum HOM05D003825 ORTHO05D004491 3.8e-51 205.7 119 83.2
Sopen01g051750 Solanum pennellii HOM05D003825 ORTHO05D004491 3.8e-51 205.7 119 83.2
PGSC0003DMG401000722 Solanum tuberosum HOM05D003825 ORTHO05D004491 3.8e-51 205.7 119 83.2
Sed0013649 Sechium edule HOM05D003825 ORTHO05D004491 5.0e-51 205.3 226 53.1
TWI75G0614 Tripterygium wilfordii HOM05D003825 ORTHO05D004491 5.0e-51 205.3 119 82.4
TAR628G0260 Trochodendron aralioides HOM05D003825 ORTHO05D004491 5.0e-51 205.3 119 81.5
CiPaw.05G063800 Carya illinoinensis HOM05D003825 ORTHO05D004491 6.5e-51 204.9 119 82.4
CDE04G3403 Ceratophyllum demersum HOM05D003825 ORTHO05D004491 6.5e-51 204.9 228 51.8
ClCG02G005070 Citrullus lanatus HOM05D003825 ORTHO05D004491 6.5e-51 204.9 119 81.5
Nitab4.5_0000215g0100 Nicotiana tabacum HOM05D003825 ORTHO05D004491 6.5e-51 204.9 119 79.8
Zm00001eb052290 Zea mays HOM05D003825 ORTHO05D004491 6.5e-51 204.9 125 76.8
MSTRG.20087 Avicennia marina HOM05D003825 ORTHO05D004491 1.1e-50 204.1 118 80.5
Lalb_Chr03g0025731 Lupinus albus HOM05D003825 ORTHO05D004491 1.9e-50 203.4 119 79.8
Lj3g0027765 Lotus japonicus HOM05D003825 ORTHO05D004491 2.5e-50 203.0 122 77.9
PGR142G3944 Punica granatum HOM05D003825 ORTHO05D004491 3.2e-50 202.6 119 79.8
arahy.Tifrunner.gnm1.ann1.NCS46Q Arachis hypogaea HOM05D003825 ORTHO05D004491 4.2e-50 202.2 119 80.7
arahy.Tifrunner.gnm1.ann1.NG5KDE Arachis hypogaea HOM05D003825 ORTHO05D004491 4.2e-50 202.2 119 80.7
Eucgr.I01264 Eucalyptus grandis HOM05D003825 ORTHO05D004491 9.4e-50 201.1 119 79.0
HanXRQChr10g0307211 Helianthus annuus HOM05D003825 ORTHO05D004491 1.6e-49 200.3 119 79.0
PSO210G2500 Papaver somniferum HOM05D003825 ORTHO05D004491 1.6e-49 200.3 119 77.3
PSO731G0103 Papaver somniferum HOM05D003825 ORTHO05D004491 1.6e-49 200.3 119 77.3
PSO675G6008 Papaver somniferum HOM05D003825 ORTHO05D004491 2.1e-49 199.9 119 79.0
arahy.Tifrunner.gnm1.ann1.BV32DL Arachis hypogaea HOM05D003825 ORTHO05D004491 4.7e-49 198.7 119 78.2
arahy.Tifrunner.gnm1.ann1.VS3LYX Arachis hypogaea HOM05D003825 ORTHO05D004491 4.7e-49 198.7 119 78.2
PSO541G0822 Papaver somniferum HOM05D003825 ORTHO05D004491 7.9e-49 198.0 119 78.2
SHI05399 Sapria himalayana HOM05D003825 ORTHO05D004491 7.9e-49 198.0 118 75.4
HPP92_013924 Vanilla planifolia HOM05D003825 ORTHO05D004491 2.3e-48 196.4 119 77.3
HPP92_014010 Vanilla planifolia HOM05D003825 ORTHO05D004491 2.3e-48 196.4 119 77.3
A08p16790 Brassica napus HOM05D003825 ORTHO05D004491 6.7e-48 194.9 120 76.7
HanXRQChr13g0410191 Helianthus annuus HOM05D003825 ORTHO05D004491 8.8e-48 194.5 119 76.5
BcaB03g11831 Brassica carinata HOM05D003825 ORTHO05D004491 1.5e-47 193.7 121 77.7
HanXRQChr04g0127981 Helianthus annuus HOM05D003825 ORTHO05D004491 1.5e-47 193.7 112 82.1
BraA08t33644Z Brassica rapa HOM05D003825 ORTHO05D004491 2.0e-47 193.4 120 75.8
C03p85750 Brassica napus HOM05D003825 ORTHO05D004491 2.6e-47 193.0 120 75.8
BolC3t20866H Brassica oleracea HOM05D003825 ORTHO05D004491 2.6e-47 193.0 120 75.8
BcaNung07194 Brassica carinata HOM05D003825 ORTHO05D004491 9.7e-47 191.0 226 49.6
Mapoly0056s0121 Marchantia polymorpha HOM05D003825 ORTHO05D004491 5.3e-45 185.3 137 61.3
unitig_60.g25447 Utricularia gibba HOM05D003825 ORTHO05D004491 1.3e-43 180.6 118 71.2
AagrBONN_evm.TU.Sc2ySwM_344.4483__4484 Anthoceros agrestis HOM05D003825 ORTHO05D004491 1.7e-43 180.3 137 59.9
AagrBONN_evm.TU.Sc2ySwM_228.1530 Anthoceros agrestis HOM05D003825 ORTHO05D004491 5.5e-42 175.3 137 58.4
Cfa005010 Carpinus fangiana HOM05D003825 ORTHO05D004491 2.4e-37 159.8 89 84.3
Dinv23529 Davidia involucrata HOM05D003825 ORTHO05D004491 2.4e-37 159.8 89 84.3
Pp3c2_6210 Physcomitrium patens HOM05D003825 ORTHO05D004491 7.7e-36 154.8 137 51.8
Aqoxy2G01755 Aquilegia oxysepala HOM05D003825 ORTHO05D004491 2.9e-35 152.9 138 58.7
DCAR_022117 Daucus carota HOM05D003825 ORTHO05D004491 5.0e-35 152.1 89 78.7
Pp3c1_35990 Physcomitrium patens HOM05D003825 ORTHO05D004491 1.5e-34 150.6 127 53.5
AL7G16770 Arabidopsis lyrata HOM05D003825 ORTHO05D004491 3.6e-33 146.0 89 73.0
SMO356G0126 Selaginella moellendorffii HOM05D003825 ORTHO05D004491 3.6e-33 146.0 118 59.3
SEGI_34878 Sequoiadendron giganteum HOM05D003825 ORTHO05D004491 1.4e-32 144.1 89 74.2
Haze_27314 Corylus avellana HOM05D003825 ORTHO05D004491 6.3e-30 135.2 117 53.0
CBR_g12176 Chara braunii HOM05D003825 ORTHO05D004491 2.5e-26 123.2 142 41.5
CBR_g55033 Chara braunii HOM05D007815 ORTHO05D004491 8.0e-25 118.2 119 47.1
vmacro02174 Vaccinium macrocarpon HOM05D003825 ORTHO05D004491 1.4e-21 107.5 162 47.5
Lalb_Chr00c44g0412641 Lupinus albus HOM05D003825 ORTHO05D004491 2.9e-19 99.8 170 44.7
Haze_26968 Corylus avellana HOM05D003825 ORTHO05D004491 8.9e-16 88.2 125 35.2
FAN24G2385 Fragaria x ananassa HOM05D003825 ORTHO05D004491 3.7e-14 82.8 71 57.7


User provided reference genes

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