Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01831 Vaccinium macrocarpon HOM05D002925 ORTHO05D003247 1.4e-104 382.9 186 100.0
Rhsim11G0137200 Rhododendron simsii HOM05D002925 ORTHO05D003247 9.7e-53 210.7 189 60.8
CSS0049612 Camellia sinensis var. sinensis HOM05D002925 ORTHO05D003247 2.3e-38 162.9 151 59.6
Actinidia24000 Actinidia chinensis HOM05D002925 ORTHO05D003247 1.2e-37 160.6 139 57.6
Hma1.2p1_0522F.1_g171730 Hydrangea macrophylla HOM05D002925 ORTHO05D003247 5.9e-34 148.3 134 58.2
Dinv09022 Davidia involucrata HOM05D002925 ORTHO05D003247 6.5e-33 144.8 133 57.1
Eucgr.I02657 Eucalyptus grandis HOM05D002925 ORTHO05D003247 2.7e-31 139.4 151 53.6
Cc02_g21380 Coffea canephora HOM05D002925 ORTHO05D003247 1.0e-30 137.5 135 57.0
Peaxi162Scf00001g00002 Petunia axillaris HOM05D002925 ORTHO05D003247 1.0e-30 137.5 143 51.0
Dinv24181 Davidia involucrata HOM05D002925 ORTHO05D003247 3.0e-30 136.0 94 68.1
Nitab4.5_0001619g0030 Nicotiana tabacum HOM05D002925 ORTHO05D003247 3.0e-30 136.0 97 66.0
PGSC0003DMG400012552 Solanum tuberosum HOM05D002925 ORTHO05D003247 8.8e-30 134.4 140 50.7
Nitab4.5_0000863g0180 Nicotiana tabacum HOM05D002925 ORTHO05D003247 1.2e-29 134.0 97 64.9
CAN.G523.55 Capsicum annuum HOM05D002925 ORTHO05D003247 2.0e-29 133.3 139 49.6
Sopen01g047830 Solanum pennellii HOM05D002925 ORTHO05D003247 2.0e-29 133.3 140 50.7
QL11p021491 Quercus lobata HOM05D002925 ORTHO05D003247 3.4e-29 132.5 98 63.3
Ca_00141_v3 Cicer arietinum L. HOM05D002925 ORTHO05D003247 5.7e-29 131.7 129 56.6
arahy.Tifrunner.gnm1.ann1.M5A3LZ Arachis hypogaea HOM05D002925 ORTHO05D003247 2.2e-28 129.8 101 62.4
arahy.Tifrunner.gnm1.ann1.VGLF4N Arachis hypogaea HOM05D002925 ORTHO05D003247 2.2e-28 129.8 101 62.4
Manes.07G032600 Manihot esculenta HOM05D002925 ORTHO05D003247 4.8e-28 128.6 144 52.8
CiPaw.06G154400 Carya illinoinensis HOM05D002925 ORTHO05D003247 6.3e-28 128.3 124 55.6
Solyc01g105330.3 Solanum lycopersicum HOM05D002925 ORTHO05D003247 6.3e-28 128.3 140 49.3
MBI02_g36599_MAGBIO Magnolia biondii HOM05D002925 ORTHO05D003247 8.3e-28 127.9 155 43.2
Aqoxy6G00762 Aquilegia oxysepala HOM05D002925 ORTHO05D003247 1.8e-27 126.7 102 58.8
Medtr2g009040 Medicago truncatula HOM05D002925 ORTHO05D003247 2.4e-27 126.3 140 52.1
GSVIVG01015726001 Vitis vinifera HOM05D002925 ORTHO05D003247 3.1e-27 125.9 97 63.9
Nn1g05384 Nelumbo nucifera HOM05D002925 ORTHO05D003247 4.1e-27 125.6 102 59.8
Lalb_Chr15g0090391 Lupinus albus HOM05D002925 ORTHO05D003247 5.4e-27 125.2 124 54.0
Nn5g30080 Nelumbo nucifera HOM05D002925 ORTHO05D003247 5.4e-27 125.2 96 64.6
SalBow5G0297 Salvia bowleyana HOM05D002925 ORTHO05D003247 7.0e-27 124.8 122 54.1
SalBow5G2582 Salvia bowleyana HOM05D002925 ORTHO05D003247 7.0e-27 124.8 122 54.1
Sc18g0006800 Simmondsia chinensis HOM05D002925 ORTHO05D003247 9.1e-27 124.4 100 57.0
RcHm_v2.0_Chr6g0271751 Rosa chinensis HOM05D002925 ORTHO05D003247 1.2e-26 124.0 127 54.3
Lalb_Chr18g0060531 Lupinus albus HOM05D002925 ORTHO05D003247 2.0e-26 123.2 127 55.9
MBI02_g35745_MAGBIO Magnolia biondii HOM05D002925 ORTHO05D003247 2.0e-26 123.2 135 48.9
MD05G1043400 Malus domestica HOM05D002925 ORTHO05D003247 2.7e-26 122.9 127 50.4
SGA_v2.0_scaffold14G07129 Striga asiatica HOM05D002925 ORTHO05D003247 2.7e-26 122.9 97 63.9
Lj6g0016748 Lotus japonicus HOM05D002925 ORTHO05D003247 3.5e-26 122.5 97 61.9
Potri.001G312900 Populus trichocarpa HOM05D002925 ORTHO05D003247 3.5e-26 122.5 139 51.8
MSTRG.20293 Avicennia marina HOM05D002925 ORTHO05D003247 4.5e-26 122.1 97 59.8
Prupe.8G062800 Prunus persica HOM05D002925 ORTHO05D003247 4.5e-26 122.1 124 53.2
Cfa005642 Carpinus fangiana HOM05D002925 ORTHO05D003247 5.9e-26 121.7 97 58.8
Glyma.15G054200 Glycine max HOM05D002925 ORTHO05D003247 5.9e-26 121.7 97 58.8
Migut.B00599 Erythranthe guttata HOM05D002925 ORTHO05D003247 7.7e-26 121.3 99 60.6
Phvul.006G205800 Phaseolus vulgaris HOM05D002925 ORTHO05D003247 7.7e-26 121.3 97 57.7
Psat1g216280 Pisum sativum HOM05D002925 ORTHO05D003247 7.7e-26 121.3 122 54.1
VMungo0540G1175 Vigna mungo HOM05D002925 ORTHO05D003247 7.7e-26 121.3 96 59.4
TAR625G1540 Trochodendron aralioides HOM05D002925 ORTHO05D003247 1.0e-25 120.9 148 48.0
Os09g0473350 Oryza sativa ssp. japonica HOM05D002925 ORTHO05D003247 1.7e-25 120.2 102 56.9
TPR.G25224 Trifolium pratense HOM05D002925 ORTHO05D003247 1.7e-25 120.2 143 51.7
GSVIVG01009040001 Vitis vinifera HOM05D002925 ORTHO05D003247 1.7e-25 120.2 95 61.1
SGA_v2.0_scaffold83G26306 Striga asiatica HOM05D002925 ORTHO05D003247 2.3e-25 119.8 97 60.8
FAN15G3696 Fragaria x ananassa HOM05D002925 ORTHO05D003247 3.8e-25 119.0 97 58.8
FAN20G1033 Fragaria x ananassa HOM05D002925 ORTHO05D003247 3.8e-25 119.0 97 58.8
Gohir.A03G174900 Gossypium hirsutum HOM05D002925 ORTHO05D003247 3.8e-25 119.0 125 56.8
MD10G1050700 Malus domestica HOM05D002925 ORTHO05D003247 3.8e-25 119.0 127 48.8
TPR.G36116 Trifolium pratense HOM05D002925 ORTHO05D003247 5.0e-25 118.6 127 55.1
DCAR_021864 Daucus carota HOM05D002925 ORTHO05D003247 6.6e-25 118.2 97 54.6
FvH4_2g11920 Fragaria vesca HOM05D002925 ORTHO05D003247 6.6e-25 118.2 95 60.0
Sabra16G0197500 Salix brachista HOM05D002925 ORTHO05D003247 6.6e-25 118.2 136 48.5
FAN24G2963 Fragaria x ananassa HOM05D002925 ORTHO05D003247 8.6e-25 117.9 95 60.0
TAR076G0002 Trochodendron aralioides HOM05D002925 ORTHO05D003247 1.1e-24 117.5 149 46.3
Sc23g0000240 Simmondsia chinensis HOM05D002925 ORTHO05D003247 1.5e-24 117.1 96 58.3
Gohir.D02G198200 Gossypium hirsutum HOM05D002925 ORTHO05D003247 1.9e-24 116.7 125 56.0
Gorai.005G221500 Gossypium raimondii HOM05D002925 ORTHO05D003247 1.9e-24 116.7 125 56.0
COL.COLO4_29615 Corchorus olitorius HOM05D002925 ORTHO05D003247 2.5e-24 116.3 122 52.5
Glyma.08G178400 Glycine max HOM05D002925 ORTHO05D003247 3.3e-24 115.9 96 60.4
Dinv14338 Davidia involucrata HOM05D002925 ORTHO05D003247 4.2e-24 115.5 96 58.3
Atru.chr6.1160 Acer truncatum HOM05D002925 ORTHO05D003247 5.5e-24 115.2 123 54.5
Oeu036916.1 Olea europaea HOM05D002925 ORTHO05D003247 7.2e-24 114.8 97 57.7
PSO447G0391 Papaver somniferum HOM05D002925 ORTHO05D003247 7.2e-24 114.8 141 46.8
PSO541G2635 Papaver somniferum HOM05D002925 ORTHO05D003247 1.2e-23 114.0 116 50.0
Cpa.g.sc42.36 Carica papaya HOM05D002925 ORTHO05D003247 1.6e-23 113.6 96 58.3
PSO531G0001 Papaver somniferum HOM05D002925 ORTHO05D003247 1.6e-23 113.6 142 45.8
SalBow7G1697 Salvia bowleyana HOM05D002925 ORTHO05D003247 1.6e-23 113.6 96 57.3
HPP92_011216 Vanilla planifolia HOM05D002925 ORTHO05D003247 1.6e-23 113.6 96 59.4
Thecc.02G136300 Theobroma cacao HOM05D002925 ORTHO05D003247 2.1e-23 113.2 123 54.5
Hund26967 Selenicereus undatus HOM05D002925 ORTHO05D003247 3.6e-23 112.5 170 41.2
TWI59G1115 Tripterygium wilfordii HOM05D002925 ORTHO05D003247 3.6e-23 112.5 122 51.6
TWI56G0820 Tripterygium wilfordii HOM05D002925 ORTHO05D003247 8.0e-23 111.3 95 54.7
HanXRQChr02g0043481 Helianthus annuus HOM05D002925 ORTHO05D003247 1.0e-22 110.9 181 38.7
SGA_v2.0_scaffold74G24580 Striga asiatica HOM05D002925 ORTHO05D003247 1.0e-22 110.9 96 55.2
Ciclev10027826m.g Citrus clementina HOM05D002925 ORTHO05D003247 1.4e-22 110.5 98 59.2
Hund06376 Selenicereus undatus HOM05D002925 ORTHO05D003247 1.4e-22 110.5 139 44.6
AUR62027772 Chenopodium quinoa HOM05D002925 ORTHO05D003247 2.3e-22 109.8 119 47.9
THA.LOC104807164 Tarenaya hassleriana HOM05D002925 ORTHO05D003247 2.3e-22 109.8 118 51.7
Zm00001eb101320 Zea mays HOM05D002925 ORTHO05D003247 4.0e-22 109.0 95 54.7
Migut.C00133 Erythranthe guttata HOM05D002925 ORTHO05D003247 5.2e-22 108.6 156 40.4
EL10Ac1g01207 Beta vulgaris HOM05D002925 ORTHO05D003247 1.2e-21 107.5 95 54.7
CSS0032438 Camellia sinensis var. sinensis HOM05D002925 ORTHO05D003247 1.2e-21 107.5 96 58.3
MD00G1009700 Malus domestica HOM05D002925 ORTHO05D003247 1.2e-21 107.5 102 49.0
MSTRG.24975 Avicennia marina HOM05D002925 ORTHO05D003247 1.5e-21 107.1 95 55.8
Solyc04g074250.3 Solanum lycopersicum HOM05D002925 ORTHO05D003247 1.5e-21 107.1 102 52.9
Sopen04g029390 Solanum pennellii HOM05D002925 ORTHO05D003247 1.5e-21 107.1 102 52.9
Ah.05g169890 Amaranthus hybridus HOM05D002925 ORTHO05D003247 2.0e-21 106.7 119 47.1
AUR62010148 Chenopodium quinoa HOM05D002925 ORTHO05D003247 2.0e-21 106.7 115 46.1
Cc10_g07100 Coffea canephora HOM05D002925 ORTHO05D003247 2.0e-21 106.7 96 55.2
Potri.005G164100 Populus trichocarpa HOM05D002925 ORTHO05D003247 2.0e-21 106.7 97 55.7
PGSC0003DMG400006417 Solanum tuberosum HOM05D002925 ORTHO05D003247 2.0e-21 106.7 102 53.9
Lsat_1_v5_gn_1_3860 Lactuca sativa HOM05D002925 ORTHO05D003247 2.6e-21 106.3 137 44.5
MD08G1184300 Malus domestica HOM05D002925 ORTHO05D003247 2.6e-21 106.3 91 54.9
Nitab4.5_0000232g0050 Nicotiana tabacum HOM05D002925 ORTHO05D003247 2.6e-21 106.3 96 57.3
Nitab4.5_0006616g0010 Nicotiana tabacum HOM05D002925 ORTHO05D003247 2.6e-21 106.3 96 57.3
Peaxi162Scf00392g00416 Petunia axillaris HOM05D002925 ORTHO05D003247 7.5e-21 104.8 177 40.7
AUR62013144 Chenopodium quinoa HOM05D002925 ORTHO05D003247 1.7e-20 103.6 118 44.1
ECA247G0600 Erigeron canadensis HOM05D002925 ORTHO05D003247 2.2e-20 103.2 139 42.4
Prupe.1G518500 Prunus persica HOM05D002925 ORTHO05D003247 2.2e-20 103.2 122 45.9
Ah.01g022240 Amaranthus hybridus HOM05D002925 ORTHO05D003247 2.8e-20 102.8 104 48.1
DCAR_008741 Daucus carota HOM05D002925 ORTHO05D003247 8.3e-20 101.3 96 50.0
ECA232G4158 Erigeron canadensis HOM05D002925 ORTHO05D003247 1.1e-19 100.9 96 52.1
HanXRQChr05g0145421 Helianthus annuus HOM05D002925 ORTHO05D003247 1.8e-19 100.1 168 36.9
CDE10G0684 Ceratophyllum demersum HOM05D002925 ORTHO05D003247 2.4e-19 99.8 140 40.0
Actinidia33129 Actinidia chinensis HOM05D002925 ORTHO05D003247 3.1e-19 99.4 144 41.7
CDE10G0644 Ceratophyllum demersum HOM05D002925 ORTHO05D003247 3.1e-19 99.4 122 42.6
RcHm_v2.0_Chr6g0271611 Rosa chinensis HOM05D002925 ORTHO05D003247 3.1e-19 99.4 117 53.8
FAN04G0469 Fragaria x ananassa HOM05D002925 ORTHO05D003247 5.4e-19 98.6 95 50.5
Lalb_Chr11g0065401 Lupinus albus HOM05D002925 ORTHO05D003247 9.2e-19 97.8 95 51.6
Oeu029761.1 Olea europaea HOM05D002925 ORTHO05D003247 9.2e-19 97.8 102 48.0
RcHm_v2.0_Chr7g0238671 Rosa chinensis HOM05D002925 ORTHO05D003247 9.2e-19 97.8 95 50.5
Sabra02G0076700 Salix brachista HOM05D002925 ORTHO05D003247 1.2e-18 97.4 97 53.6
ECA232G0543 Erigeron canadensis HOM05D002925 ORTHO05D003247 2.0e-18 96.7 150 38.0
FvH4_5g37120 Fragaria vesca HOM05D002925 ORTHO05D003247 2.0e-18 96.7 95 50.5
FAN08G0410 Fragaria x ananassa HOM05D002925 ORTHO05D003247 2.0e-18 96.7 95 49.5
FAN18G3145 Fragaria x ananassa HOM05D002925 ORTHO05D003247 2.0e-18 96.7 95 50.5
RcHm_v2.0_Chr7g0243951 Rosa chinensis HOM05D002925 ORTHO05D003247 3.5e-18 95.9 138 39.9
FAN13G2209 Fragaria x ananassa HOM05D002925 ORTHO05D003247 5.9e-18 95.1 95 49.5
Ciclev10000205m.g Citrus clementina HOM05D002925 ORTHO05D003247 1.0e-17 94.4 134 40.3
Lsat_1_v5_gn_5_108081 Lactuca sativa HOM05D002925 ORTHO05D003247 1.0e-17 94.4 122 41.0
QL12p036977 Quercus lobata HOM05D002925 ORTHO05D003247 1.3e-17 94.0 94 48.9
Thhalv10007200m.g Eutrema salsugineum HOM05D002925 ORTHO05D003247 2.3e-17 93.2 128 39.8
VMungo1309G2842 Vigna mungo HOM05D002925 ORTHO05D003247 2.9e-17 92.8 149 36.2
HanXRQChr16g0514751 Helianthus annuus HOM05D002925 ORTHO05D003247 3.9e-17 92.4 125 38.4
THA.LOC104800147 Tarenaya hassleriana HOM05D002925 ORTHO05D003247 3.9e-17 92.4 126 40.5
A07p14550 Brassica napus HOM05D002925 ORTHO05D003247 6.6e-17 91.7 143 34.3
BraA07t29201Z Brassica rapa HOM05D002925 ORTHO05D003247 6.6e-17 91.7 143 34.3
unitig_22.g6065 Utricularia gibba HOM05D002925 ORTHO05D003247 6.6e-17 91.7 104 43.3
Os08g0485700 Oryza sativa ssp. japonica HOM05D002925 ORTHO05D003247 8.6e-17 91.3 93 48.4
Cfa013644 Carpinus fangiana HOM05D002925 ORTHO05D003247 1.1e-16 90.9 144 36.8
C07p21440 Brassica napus HOM05D002925 ORTHO05D003247 1.5e-16 90.5 153 32.7
EL10Ac9g21492 Beta vulgaris HOM05D002925 ORTHO05D003247 1.9e-16 90.1 132 38.6
unitig_8.g5045 Utricularia gibba HOM05D002925 ORTHO05D003247 1.9e-16 90.1 96 44.8
Aa31LG7G6230 Aethionema arabicum HOM05D002925 ORTHO05D003247 2.5e-16 89.7 145 37.9
BcaC06g34950 Brassica carinata HOM05D002925 ORTHO05D003247 2.5e-16 89.7 153 34.0
BolC7t42671H Brassica oleracea HOM05D000298 ORTHO05D003247 2.5e-16 89.7 153 34.0
Sp1g19810 Schrenkiella parvula HOM05D002925 ORTHO05D003247 4.3e-16 89.0 133 37.6
vmacro21264 Vaccinium macrocarpon HOM05D002925 ORTHO05D003247 7.3e-16 88.2 93 46.2
Os08g0485600 Oryza sativa ssp. japonica HOM05D002925 ORTHO05D003247 4.7e-15 85.5 93 45.2
Phvul.009G031600 Phaseolus vulgaris HOM05D002925 ORTHO05D003247 4.7e-15 85.5 148 35.1
CiPaw.07G178900 Carya illinoinensis HOM05D002925 ORTHO05D003247 6.1e-15 85.1 95 42.1
BcaB03g14218 Brassica carinata HOM05D002925 ORTHO05D003247 8.0e-15 84.7 159 33.3
PGR031G1025 Punica granatum HOM05D002925 ORTHO05D003247 1.0e-14 84.3 81 50.6
ATR0782G164 Amborella trichopoda HOM05D002925 ORTHO05D003247 1.8e-14 83.6 87 41.4
ECA234G1059 Erigeron canadensis HOM05D002925 ORTHO05D003247 3.1e-14 82.8 97 39.2
Rhsim06G0081200 Rhododendron simsii HOM05D002925 ORTHO05D003247 5.2e-14 82.0 155 34.8
CANSAT25G0699 Cannabis sativa HOM05D002925 ORTHO05D003247 1.2e-13 80.9 156 32.7
Glyma.06G102900 Glycine max HOM05D002925 ORTHO05D003247 1.5e-13 80.5 77 42.9
AT1G22310 Arabidopsis thaliana HOM05D002925 ORTHO05D003247 2.0e-13 80.1 83 41.0
Haze_22282 Corylus avellana HOM05D002925 ORTHO05D003247 2.0e-13 80.1 107 40.2
arahy.Tifrunner.gnm1.ann1.8R41I4 Arachis hypogaea HOM05D002925 ORTHO05D003247 2.6e-13 79.7 73 43.8
arahy.Tifrunner.gnm1.ann1.66CWE3 Arachis hypogaea HOM05D002925 ORTHO05D003247 4.4e-13 79.0 71 43.7
Thecc.02G136800 Theobroma cacao HOM05D002925 ORTHO05D003247 4.4e-13 79.0 83 49.4
Carub.0001s2186 Capsella rubella HOM05D002925 ORTHO05D003247 9.8e-13 77.8 142 31.0
Glyma.04G101200 Glycine max HOM05D002925 ORTHO05D003247 1.3e-12 77.4 164 31.7
Lsat_1_v5_gn_7_82001 Lactuca sativa HOM05D002925 ORTHO05D003247 2.9e-12 76.3 97 38.1
Psat5g138880 Pisum sativum HOM05D002925 ORTHO05D003247 2.9e-12 76.3 82 47.6
CARHR022690 Cardamine hirsuta HOM05D002925 ORTHO05D003247 8.3e-12 74.7 74 41.9
Duzib093G1387 Durio zibethinus HOM05D002925 ORTHO05D003247 8.3e-12 74.7 71 46.5
TPR.G26131 Trifolium pratense HOM05D002925 ORTHO05D003247 8.3e-12 74.7 136 37.5
AL1G35760 Arabidopsis lyrata HOM05D002925 ORTHO05D003247 1.1e-11 74.3 82 39.0
HanXRQChr11g0338071 Helianthus annuus HOM05D002925 ORTHO05D003247 1.1e-11 74.3 95 35.8
Gohir.A01G127000 Gossypium hirsutum HOM05D002925 ORTHO05D003247 2.4e-11 73.2 71 45.1
Duzib116G0838 Durio zibethinus HOM05D002925 ORTHO05D003247 3.2e-11 72.8 71 43.7
Gohir.D01G114901 Gossypium hirsutum HOM05D002925 ORTHO05D003247 7.0e-11 71.6 138 29.7
Ca_15252_v3 Cicer arietinum L. HOM05D002925 ORTHO05D003247 9.2e-11 71.2 141 35.5
Gorai.002G140700 Gossypium raimondii HOM05D002925 ORTHO05D003247 9.2e-11 71.2 138 29.7
COL.COLO4_16382 Corchorus olitorius HOM05D002925 ORTHO05D003247 1.6e-10 70.5 82 43.9
Medtr3g074640 Medicago truncatula HOM05D002925 ORTHO05D003247 2.0e-10 70.1 163 33.7
SEGI_07396 Sequoiadendron giganteum HOM05D002925 ORTHO05D003247 2.7e-10 69.7 71 42.3
Lj1g0024313 Lotus japonicus HOM05D002925 ORTHO05D003247 6.0e-10 68.6 140 36.4
SGA_v2.0_scaffold74G24575 Striga asiatica HOM05D002925 ORTHO05D003247 5.0e-09 65.5 123 35.8
AUR62018927 Chenopodium quinoa HOM05D002925 ORTHO05D003247 1.1e-08 64.3 63 50.8


User provided reference genes

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