Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01251 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 0.0e+00 1199.5 604 100.0
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 1.0e-175 620.9 689 53.6
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 2.9e-175 619.4 634 54.1
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 1.5e-174 617.1 662 53.2
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 5.5e-174 615.1 633 54.0
Cc04_g09090 Coffea canephora HOM05D006175 ORTHO05D008081 1.6e-173 613.6 634 54.6
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 2.1e-173 613.2 631 53.6
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 3.0e-172 609.4 644 53.7
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 2.6e-171 606.3 630 53.7
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 3.4e-171 605.9 632 53.5
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 1.3e-170 604.0 632 53.3
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 6.3e-170 601.7 638 53.0
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 8.3e-170 601.3 627 53.1
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 1.4e-169 600.5 628 53.2
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 1.8e-169 600.1 619 52.8
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 2.4e-169 599.7 630 53.2
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 4.1e-169 599.0 618 55.2
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 5.4e-169 598.6 628 53.0
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 2.0e-168 596.7 635 52.9
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 3.5e-168 595.9 632 52.8
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 4.5e-168 595.5 637 54.6
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 5.9e-168 595.1 634 51.9
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 5.9e-168 595.1 627 52.5
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 1.0e-167 594.3 639 52.7
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 2.9e-167 592.8 644 52.3
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 6.6e-167 591.7 632 52.1
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 1.1e-166 590.9 656 50.6
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 1.1e-166 590.9 633 52.3
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 1.5e-166 590.5 630 51.9
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 8.0e-165 584.7 631 51.7
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 1.0e-164 584.3 633 52.8
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 1.0e-164 584.3 628 52.5
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 2.3e-164 583.2 634 51.4
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 1.2e-163 580.9 622 52.7
ClCG04G012690 Citrullus lanatus HOM05D006175 ORTHO05D008081 3.4e-163 579.3 628 51.9
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 9.8e-163 577.8 627 51.0
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 1.1e-161 574.3 623 51.4
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 2.0e-160 570.1 623 51.0
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 2.7e-160 569.7 627 50.9
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 7.8e-160 568.2 633 50.9
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 6.6e-159 565.1 637 51.6
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 1.1e-158 564.3 620 51.5
Sed0010232 Sechium edule HOM05D006175 ORTHO05D008081 2.8e-157 559.7 627 50.1
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 2.3e-156 556.6 637 51.2
Zm00001eb037700 Zea mays HOM05D006175 ORTHO05D008081 3.1e-156 556.2 626 49.2
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 4.0e-156 555.8 588 53.2
SGA_v2.0_scaffold90G27775 Striga asiatica HOM05D006175 ORTHO05D008081 1.5e-155 553.9 629 49.1
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 3.4e-155 552.7 627 51.0
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 4.4e-155 552.4 619 49.8
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 5.8e-155 552.0 646 48.9
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 7.5e-155 551.6 629 48.8
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 2.2e-154 550.1 637 49.3
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 3.7e-154 549.3 622 50.8
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 1.4e-153 547.4 622 51.1
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 9.2e-153 544.7 606 50.3
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 7.8e-152 541.6 631 50.1
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 7.8e-152 541.6 652 48.5
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 2.3e-151 540.0 625 49.6
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 5.1e-151 538.9 632 49.4
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 1.9e-150 537.0 634 49.2
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 9.5e-150 534.6 624 49.0
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 9.5e-150 534.6 628 48.2
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 1.2e-149 534.3 622 49.7
BcaB01g03058 Brassica carinata HOM05D006175 ORTHO05D008081 8.1e-149 531.6 624 48.7
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 1.2e-147 527.7 622 48.6
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 7.5e-147 525.0 623 48.2
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 1.3e-146 524.2 623 48.2
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 1.3e-146 524.2 597 51.1
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 3.7e-146 522.7 623 48.0
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 4.9e-146 522.3 629 47.9
Lj5A165T85 Lonicera japonica HOM05D006175 ORTHO05D008081 8.3e-146 521.5 579 52.0
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 1.4e-145 520.8 623 48.0
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 3.2e-145 519.6 622 48.1
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 2.1e-144 516.9 634 45.1
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 7.8e-144 515.0 624 47.8
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 1.0e-143 514.6 648 47.5
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 4.9e-138 495.7 633 45.7
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 4.6e-128 462.6 624 44.1
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.7e-127 460.7 667 42.4
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 3.9e-127 459.5 618 43.2
Nitab4.5_0001180g0190 Nicotiana tabacum HOM05D006175 ORTHO05D008081 3.9e-127 459.5 618 46.0
COL.COLO4_27108 Corchorus olitorius HOM05D006175 ORTHO05D008081 1.8e-124 450.7 610 43.4
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 6.9e-124 448.7 569 46.9
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 9.6e-118 428.3 616 39.9
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 9.6e-118 428.3 617 40.7
Rhsim06G0000100 Rhododendron simsii HOM05D006175 ORTHO05D008081 1.2e-115 421.4 335 64.8
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 2.9e-114 416.8 618 41.4
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 4.9e-114 416.0 633 40.8
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 2.3e-111 407.1 611 37.8
Prupe.5G240100 Prunus persica HOM05D006175 ORTHO05D008081 2.5e-110 403.7 623 41.6
HPP92_019162 Vanilla planifolia HOM05D006175 ORTHO05D008081 2.2e-101 374.0 627 38.4
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 1.4e-100 371.3 627 36.5
HanXRQChr05g0129731 Helianthus annuus HOM05D006175 ORTHO05D008081 9.0e-100 368.6 360 56.1
Lalb_Chr22g0353691 Lupinus albus HOM05D006175 ORTHO05D008081 1.7e-98 364.4 335 56.4
HanXRQChr11g0338981 Helianthus annuus HOM05D006175 ORTHO05D008081 2.5e-89 334.0 336 54.5
unitig_0.g1094 Utricularia gibba HOM05D006175 ORTHO05D008081 3.7e-85 320.1 643 34.7
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 4.8e-85 319.7 614 32.1
Psat6g072600 Pisum sativum HOM05D006175 ORTHO05D008081 6.3e-85 319.3 652 35.9
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 1.2e-80 305.1 541 38.1
FAN18G1603 Fragaria x ananassa HOM05D006175 ORTHO05D008081 3.5e-75 287.0 267 57.3
Glyma.09G169100 Glycine max HOM05D006175 ORTHO05D008081 6.3e-69 266.2 334 47.0
AL4G26880 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 3.2e-65 253.8 406 40.4
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 7.7e-59 232.6 711 26.6
Lalb_Chr22g0353701 Lupinus albus HOM05D006175 ORTHO05D008081 4.5e-51 206.8 261 46.0
HanXRQChr05g0129721 Helianthus annuus HOM05D006175 ORTHO05D008081 1.9e-49 201.4 259 47.1
HanXRQChr11g0338971 Helianthus annuus HOM05D006175 ORTHO05D008081 1.6e-48 198.4 259 46.7
VMungo1215G0683 Vigna mungo HOM05D006175 ORTHO05D008081 1.0e-47 195.7 237 45.6
Cre10.g424200 Chlamydomonas reinhardtii HOM05D006175 ORTHO05D008081 7.0e-44 183.0 657 26.0
FAN04G2119 Fragaria x ananassa HOM05D006175 ORTHO05D008081 2.7e-43 181.0 249 45.0
FAN08G2730 Fragaria x ananassa HOM05D006175 ORTHO05D008081 4.6e-43 180.3 249 44.6
FAN13G0892 Fragaria x ananassa HOM05D006175 ORTHO05D008081 7.8e-43 179.5 249 44.2
CDE04G1443 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 2.4e-36 157.9 120 63.3
PRCOL_00003367 Prasinoderma coloniale HOM05D006175 ORTHO05D008081 3.9e-34 150.6 557 25.7
AUR62043421 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.6e-32 145.2 188 44.7
Thecc.10G092900 Theobroma cacao HOM05D006175 ORTHO05D008952 5.8e-22 110.2 134 47.0
Ca_23674_v3 Cicer arietinum L. HOM05D006175 ORTHO05D008081 4.2e-20 104.0 113 45.1
CDE04G2185 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 4.3e-17 94.0 84 57.1
CSS0024377 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D043346 1.2e-14 85.9 49 85.7
CDE04G3312 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 4.9e-13 80.5 108 41.7
Thecc.04G242900 Theobroma cacao HOM05D006175 ORTHO05D008081 1.1e-09 69.3 42 71.4
BcaC05g28616 Brassica carinata HOM05D002760 ORTHO05D001361 7.3e-09 66.6 31 83.9
A07p06810 Brassica napus HOM05D002760 ORTHO05D003169 7.3e-09 66.6 31 83.9
BNapus_Darmor_BZH_scaffold_38p01460 Brassica napus HOM05D002760 ORTHO05D003169 7.3e-09 66.6 31 83.9
BraA03t12607Z Brassica rapa HOM05D002760 ORTHO05D003169 7.3e-09 66.6 31 83.9
C05p47240 Brassica napus HOM05D002760 ORTHO05D003169 2.1e-08 65.1 31 80.6
CDE04G3394 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 3.6e-08 64.3 90 46.7


User provided reference genes

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