Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01061 Vaccinium macrocarpon HOM05D003724 ORTHO05D004367 1.2e-71 273.1 141 100.0
Rhsim12G0026000 Rhododendron simsii HOM05D003724 ORTHO05D004367 3.2e-64 248.4 140 92.9
Actinidia08073 Actinidia chinensis HOM05D003724 ORTHO05D004367 1.3e-52 209.9 141 79.4
Actinidia30650 Actinidia chinensis HOM05D003724 ORTHO05D004367 1.3e-49 199.9 143 77.6
CSS0007637 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 1.9e-45 186.0 143 72.0
CSS0010492 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 1.5e-42 176.4 144 69.4
QL03p052803 Quercus lobata HOM05D003724 ORTHO05D004367 1.7e-41 172.9 144 67.4
GSVIVG01010479001 Vitis vinifera HOM05D003724 ORTHO05D004367 4.9e-41 171.4 144 66.0
Lj3C1068T3 Lonicera japonica HOM05D003724 ORTHO05D004367 7.1e-40 167.5 143 69.2
Dinv10959 Davidia involucrata HOM05D003724 ORTHO05D004367 1.6e-39 166.4 135 71.9
TWI75G0323 Tripterygium wilfordii HOM05D003724 ORTHO05D004367 7.9e-39 164.1 143 69.2
Thecc.02G209200 Theobroma cacao HOM05D003724 ORTHO05D004367 1.0e-38 163.7 144 65.3
Atru.chr11.2319 Acer truncatum HOM05D003724 ORTHO05D004367 2.3e-38 162.5 143 67.1
Cc09_g04930 Coffea canephora HOM05D003724 ORTHO05D004367 6.7e-38 161.0 144 63.2
Potri.003G173200 Populus trichocarpa HOM05D003724 ORTHO05D004367 8.7e-38 160.6 144 65.3
Sabra03G0126700 Salix brachista HOM05D003724 ORTHO05D004367 8.7e-38 160.6 144 66.0
COL.COLO4_20398 Corchorus olitorius HOM05D003724 ORTHO05D004367 1.5e-37 159.8 142 62.7
Prupe.1G226200 Prunus persica HOM05D003724 ORTHO05D004367 6.3e-36 154.5 144 65.3
CiPaw.05G110100 Carya illinoinensis HOM05D003724 ORTHO05D004367 1.4e-35 153.3 145 60.7
Nitab4.5_0003981g0060 Nicotiana tabacum HOM05D003724 ORTHO05D004367 9.0e-35 150.6 143 58.7
Sabra01G0039800 Salix brachista HOM05D003724 ORTHO05D004367 1.2e-34 150.2 141 63.1
CANSAT01G0850 Cannabis sativa HOM05D003724 ORTHO05D004367 3.8e-33 145.2 147 60.5
MD13G1118700 Malus domestica HOM05D003724 ORTHO05D004367 3.8e-33 145.2 144 61.8
MD16G1118900 Malus domestica HOM05D003724 ORTHO05D004367 3.8e-33 145.2 144 60.4
Nitab4.5_0002699g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 3.8e-33 145.2 143 55.2
Oeu036873.1 Olea europaea HOM05D003724 ORTHO05D004367 3.8e-33 145.2 144 61.1
PGR102G1478 Punica granatum HOM05D003724 ORTHO05D004367 1.4e-32 143.3 144 61.8
Potri.001G055201 Populus trichocarpa HOM05D003724 ORTHO05D004367 2.5e-32 142.5 110 72.7
Sopen04g002390 Solanum pennellii HOM05D003724 ORTHO05D004367 2.5e-32 142.5 142 58.5
FAN12G4010 Fragaria x ananassa HOM05D003724 ORTHO05D004367 3.2e-32 142.1 144 57.6
Migut.K00732 Erythranthe guttata HOM05D003724 ORTHO05D004367 4.2e-32 141.7 144 58.3
RcHm_v2.0_Chr4g0430341 Rosa chinensis HOM05D003724 ORTHO05D004367 4.2e-32 141.7 145 57.9
Cpa.g.sc43.54 Carica papaya HOM05D003724 ORTHO05D004367 5.5e-32 141.4 141 57.4
FvH4_4g23791 Fragaria vesca HOM05D003724 ORTHO05D004367 7.2e-32 141.0 144 56.9
Gohir.D02G149500 Gossypium hirsutum HOM05D003724 ORTHO05D004367 7.2e-32 141.0 144 58.3
Gorai.005G167400 Gossypium raimondii HOM05D003724 ORTHO05D004367 7.2e-32 141.0 144 58.3
CAN.G804.3 Capsicum annuum HOM05D003724 ORTHO05D004367 9.3e-32 140.6 142 57.0
Gohir.A03G126400 Gossypium hirsutum HOM05D003724 ORTHO05D004367 9.3e-32 140.6 144 58.3
Nitab4.5_0002441g0080 Nicotiana tabacum HOM05D003724 ORTHO05D004367 9.3e-32 140.6 143 57.3
Solyc04g007330.3 Solanum lycopersicum HOM05D003724 ORTHO05D004367 9.3e-32 140.6 142 57.7
FAN12G4031 Fragaria x ananassa HOM05D003724 ORTHO05D004367 1.3e-30 136.7 145 55.2
FvH4_4g23800 Fragaria vesca HOM05D003724 ORTHO05D004367 1.8e-30 136.3 145 55.2
Aqoxy5G02771 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 3.0e-30 135.6 144 56.2
AUR62008480 Chenopodium quinoa HOM05D003724 ORTHO05D004367 3.0e-30 135.6 146 54.8
RcHm_v2.0_Chr4g0430321 Rosa chinensis HOM05D003724 ORTHO05D004367 3.0e-30 135.6 144 57.6
TAR374G1082 Trochodendron aralioides HOM05D003724 ORTHO05D004367 3.0e-30 135.6 135 59.3
RcHm_v2.0_Chr4g0430291 Rosa chinensis HOM05D003724 ORTHO05D004367 3.9e-30 135.2 145 57.2
FAN22G0779 Fragaria x ananassa HOM05D003724 ORTHO05D004367 5.1e-30 134.8 145 55.2
FAN24G3534 Fragaria x ananassa HOM05D003724 ORTHO05D004367 5.1e-30 134.8 145 54.5
Hund06087 Selenicereus undatus HOM05D003724 ORTHO05D004367 5.1e-30 134.8 145 55.2
Aqoxy7G01914 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 1.9e-29 132.9 144 56.2
AUR62021613 Chenopodium quinoa HOM05D003724 ORTHO05D004367 2.5e-29 132.5 146 54.8
THA.LOC104825509 Tarenaya hassleriana HOM05D003724 ORTHO05D004367 2.5e-29 132.5 144 52.8
FAN17G0970 Fragaria x ananassa HOM05D003724 ORTHO05D004367 3.3e-29 132.1 145 54.5
Peaxi162Scf00128g01233 Petunia axillaris HOM05D003724 ORTHO05D004367 1.6e-28 129.8 143 56.6
SGA_v2.0_scaffold9G04687 Striga asiatica HOM05D003724 ORTHO05D004367 8.2e-28 127.5 148 56.8
ECA233G0767 Erigeron canadensis HOM05D003724 ORTHO05D004367 1.4e-27 126.7 145 55.9
Migut.C00176 Erythranthe guttata HOM05D003724 ORTHO05D004367 1.4e-27 126.7 144 51.4
SalBow2G1610 Salvia bowleyana HOM05D003724 ORTHO05D004367 1.4e-27 126.7 145 54.5
Sc04g0010100 Simmondsia chinensis HOM05D003724 ORTHO05D004367 2.4e-27 125.9 147 55.8
Oeu060814.1 Olea europaea HOM05D003724 ORTHO05D004367 9.1e-27 124.0 146 55.5
arahy.Tifrunner.gnm1.ann1.QLFJ9Y Arachis hypogaea HOM05D003724 ORTHO05D004367 2.0e-26 122.9 148 54.1
Nitab4.5_0003884g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 2.0e-26 122.9 146 50.0
Sopen05g010670 Solanum pennellii HOM05D003724 ORTHO05D004367 3.4e-26 122.1 119 58.0
Ah.01g020690 Amaranthus hybridus HOM05D003724 ORTHO05D004367 3.8e-25 118.6 149 51.7
PGSC0003DMG400029108 Solanum tuberosum HOM05D003724 ORTHO05D004367 5.0e-25 118.2 142 50.0
MBI06_g20299_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 6.5e-25 117.9 148 52.7
arahy.Tifrunner.gnm1.ann1.3XH1N1 Arachis hypogaea HOM05D003724 ORTHO05D004367 1.1e-24 117.1 148 54.1
ClCG08G017130 Citrullus lanatus HOM05D003724 ORTHO05D004367 3.2e-24 115.5 140 51.4
TPR.G28283 Trifolium pratense HOM05D003724 ORTHO05D004367 4.2e-24 115.2 145 50.3
HanXRQChr08g0207781 Helianthus annuus HOM05D003724 ORTHO05D004367 1.6e-23 113.2 145 50.3
Glyma.11G250400 Glycine max HOM05D003724 ORTHO05D004367 4.6e-23 111.7 145 52.4
EL10Ac6g13492 Beta vulgaris HOM05D003724 ORTHO05D004367 6.1e-23 111.3 161 48.4
MELO3C010743.2 Cucumis melo HOM05D003724 ORTHO05D004367 1.0e-22 110.5 140 50.0
Medtr3g085380 Medicago truncatula HOM05D003724 ORTHO05D004367 3.0e-22 109.0 145 50.3
Phvul.001G261701 Phaseolus vulgaris HOM05D003724 ORTHO05D004367 3.9e-22 108.6 135 54.1
SHI17969 Sapria himalayana HOM05D003724 ORTHO05D004367 5.1e-22 108.2 130 53.8
Ca_16461_v3 Cicer arietinum L. HOM05D003724 ORTHO05D004367 1.1e-21 107.1 145 50.3
Lalb_Chr01g0009271 Lupinus albus HOM05D003724 ORTHO05D004367 1.1e-21 107.1 146 51.4
unitig_8.g3138 Utricularia gibba HOM05D003724 ORTHO05D004367 7.4e-21 104.4 142 48.6
Thhalv10018311m.g Eutrema salsugineum HOM05D003724 ORTHO05D004367 9.7e-21 104.0 141 51.1
Carub.0002s1366 Capsella rubella HOM05D003724 ORTHO05D004367 1.3e-20 103.6 142 50.0
Sp5g22320 Schrenkiella parvula HOM05D003724 ORTHO05D004367 1.3e-20 103.6 142 51.4
Lj1g0003468 Lotus japonicus HOM05D003724 ORTHO05D004367 2.8e-20 102.4 144 47.9
AL2G25920 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 4.8e-20 101.7 143 50.3
Sed0021729 Sechium edule HOM05D003724 ORTHO05D004367 1.1e-19 100.5 142 48.6
Psat5g096280 Pisum sativum HOM05D003724 ORTHO05D004367 1.4e-19 100.1 146 48.6
CDE05G2922 Ceratophyllum demersum HOM05D003724 ORTHO05D004367 1.8e-19 99.8 117 51.3
CsaV3_2G025450 Cucumis sativus L. HOM05D003724 ORTHO05D004367 2.4e-19 99.4 130 49.2
Aa31sc377G30 Aethionema arabicum HOM05D003724 ORTHO05D004367 4.1e-19 98.6 150 45.3
AT1G67370 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 9.1e-19 97.4 142 48.6
CSS0008698 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 9.1e-19 97.4 111 58.6
FvH4_2g22740 Fragaria vesca HOM05D003724 ORTHO05D004367 2.0e-18 96.3 144 45.1
FAN07G2055 Fragaria x ananassa HOM05D003724 ORTHO05D004367 3.4e-18 95.5 144 47.9
TAR622G1117 Trochodendron aralioides HOM05D003724 ORTHO05D004367 1.0e-17 94.0 134 47.0
BolC6t39148H Brassica oleracea HOM05D003724 ORTHO05D004367 1.3e-17 93.6 141 45.4
CARHR059910 Cardamine hirsuta HOM05D003724 ORTHO05D004367 1.3e-17 93.6 145 44.8
Lalb_Chr03g0034531 Lupinus albus HOM05D003724 ORTHO05D004367 3.8e-17 92.0 137 50.4
VMungo1383G3407 Vigna mungo HOM05D003724 ORTHO05D004367 5.0e-17 91.7 137 43.8
PSO478G4090 Papaver somniferum HOM05D003724 ORTHO05D004367 8.5e-17 90.9 142 44.4
PSO782G1352 Papaver somniferum HOM05D003724 ORTHO05D004367 1.1e-16 90.5 142 44.4
BcaC08g46167 Brassica carinata HOM05D003724 ORTHO05D004367 1.4e-16 90.1 141 44.0
A07p33960 Brassica napus HOM05D003724 ORTHO05D004367 1.4e-16 90.1 141 44.0
C06p42900 Brassica napus HOM05D003724 ORTHO05D004367 1.4e-16 90.1 141 44.0
BraA07t31023Z Brassica rapa HOM05D003724 ORTHO05D004367 1.4e-16 90.1 141 44.0
Nn3g16465 Nelumbo nucifera HOM05D003724 ORTHO05D004367 3.2e-16 89.0 149 45.6
BcaB03g15203 Brassica carinata HOM05D003724 ORTHO05D004367 5.5e-16 88.2 142 46.5
Lj1g0008936 Lotus japonicus HOM05D003724 ORTHO05D004367 5.5e-16 88.2 154 45.5
PSO478G5007 Papaver somniferum HOM05D003724 ORTHO05D004367 7.2e-16 87.8 142 43.0
Lsat_1_v5_gn_8_147680 Lactuca sativa HOM05D003724 ORTHO05D004367 9.4e-16 87.4 143 45.5
Solyc05g015380.2 Solanum lycopersicum HOM05D003724 ORTHO05D004367 1.2e-15 87.0 101 53.5
Sed0012468 Sechium edule HOM05D003724 ORTHO05D004367 2.7e-15 85.9 142 44.4
PSO339G4917 Papaver somniferum HOM05D003724 ORTHO05D004367 3.6e-15 85.5 144 43.1
HPP92_003196 Vanilla planifolia HOM05D003724 ORTHO05D004367 7.9e-15 84.3 146 45.2
Haze_12416 Corylus avellana HOM05D003724 ORTHO05D004367 1.4e-14 83.6 88 54.5
PSO384G3745 Papaver somniferum HOM05D003724 ORTHO05D004367 1.4e-14 83.6 142 42.3
ATR0561G244 Amborella trichopoda HOM05D003724 ORTHO05D004367 4.4e-13 78.6 149 43.6
PSO782G3500 Papaver somniferum HOM05D003724 ORTHO05D004367 3.7e-12 75.5 142 41.5
Ciclev10033677m.g Citrus clementina HOM05D003724 ORTHO05D004367 1.4e-11 73.6 147 40.8
Os09g0506800 Oryza sativa ssp. japonica HOM05D003724 ORTHO05D004367 2.6e-10 69.3 148 40.5
Zm00001eb102420 Zea mays HOM05D003724 ORTHO05D004367 1.1e-08 63.9 153 38.6
Zm00001eb247260 Zea mays HOM05D000069 ORTHO05D004367 2.5e-08 62.8 111 46.8


User provided reference genes

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