Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00863 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 7.2e-150 533.9 267 100.0
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 2.0e-112 409.5 267 80.5
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 1.6e-80 303.5 294 59.2
Actinidia29490 Actinidia chinensis HOM05D006616 ORTHO05D008435 1.1e-78 297.4 294 57.5
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 3.2e-65 252.7 325 47.1
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 4.1e-44 182.6 185 57.3
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 3.4e-43 179.5 317 40.7
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 5.5e-41 172.2 266 42.5
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 1.1e-38 164.5 279 41.9
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 4.1e-36 156.0 267 42.7
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 7.7e-35 151.8 267 42.3
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 7.9e-32 141.7 182 50.0
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 3.9e-31 139.4 264 36.7
Actinidia25416 Actinidia chinensis HOM05D006616 ORTHO05D008435 3.3e-30 136.3 107 67.3
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 1.1e-28 131.3 339 33.9
Hma1.2p1_2178F.1_g316200 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 1.8e-28 130.6 97 68.0
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 1.2e-27 127.9 264 36.0
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 4.5e-27 125.9 95 67.4
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 1.9e-25 120.6 150 49.3
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 3.2e-25 119.8 103 58.3
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 4.2e-25 119.4 260 36.9
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 9.4e-25 118.2 265 35.5
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 1.6e-24 117.5 148 49.3
Nitab4.5_0003863g0030 Nicotiana tabacum HOM05D006616 ORTHO05D008435 3.6e-24 116.3 93 64.5
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 8.0e-24 115.2 95 64.2
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 1.0e-23 114.8 265 35.5
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 1.4e-23 114.4 95 64.2
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 1.8e-23 114.0 326 35.0
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 3.0e-23 113.2 123 56.9
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 5.2e-23 112.5 93 60.2
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 8.8e-23 111.7 88 64.8
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 1.1e-22 111.3 92 60.9
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 1.5e-22 110.9 86 64.0
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 2.6e-22 110.2 82 65.9
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 3.3e-22 109.8 276 35.9
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 3.3e-22 109.8 95 63.2
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 3.3e-22 109.8 135 48.1
Sc13g0000840 Simmondsia chinensis HOM05D006616 ORTHO05D008435 9.7e-22 108.2 337 33.2
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 1.7e-21 107.5 170 40.6
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 1.7e-21 107.5 149 45.6
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 4.8e-21 105.9 90 61.1
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 4.8e-21 105.9 148 45.9
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 6.3e-21 105.5 320 36.2
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 6.3e-21 105.5 79 65.8
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 8.2e-21 105.1 266 34.2
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 1.1e-20 104.8 79 63.3
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 1.8e-20 104.0 80 66.2
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 2.4e-20 103.6 80 68.8
Psat1g016240 Pisum sativum HOM05D006616 ORTHO05D008435 4.1e-20 102.8 77 63.6
Cpa.g.sc33.190 Carica papaya HOM05D006616 ORTHO05D008435 7.0e-20 102.1 91 60.4
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 7.0e-20 102.1 264 32.2
Psat7g065560 Pisum sativum HOM05D006616 ORTHO05D008435 7.0e-20 102.1 77 63.6
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 1.6e-19 100.9 86 59.3
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 1.6e-19 100.9 363 30.3
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 2.7e-19 100.1 77 62.3
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 3.5e-19 99.8 101 54.5
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 4.5e-19 99.4 82 62.2
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 4.5e-19 99.4 85 58.8
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 4.5e-19 99.4 90 57.8
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 5.9e-19 99.0 303 33.3
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 7.7e-19 98.6 156 41.7
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 1.3e-18 97.8 77 63.6
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 2.2e-18 97.1 93 55.9
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 2.2e-18 97.1 87 60.9
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 6.5e-18 95.5 95 54.7
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 1.5e-17 94.4 328 31.1
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 3.2e-17 93.2 71 67.6
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 4.2e-17 92.8 79 65.8
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 4.2e-17 92.8 85 54.1
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 5.5e-17 92.4 79 60.8
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 5.5e-17 92.4 95 52.6
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 7.2e-17 92.0 82 59.8
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 9.4e-17 91.7 268 32.5
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 1.6e-16 90.9 322 34.2
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 2.1e-16 90.5 83 60.2
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 8.0e-16 88.6 71 63.4
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 8.0e-16 88.6 71 63.4
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 1.0e-15 88.2 66 65.2
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 1.4e-15 87.8 295 30.8
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 4.0e-15 86.3 84 58.3
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 5.2e-15 85.9 109 50.5
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 6.8e-15 85.5 78 56.4
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 8.8e-15 85.1 84 56.0
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.2e-14 84.7 73 61.6
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 2.6e-14 83.6 79 60.8
COL.COLO4_33517 Corchorus olitorius HOM05D006616 ORTHO05D008435 2.6e-14 83.6 71 60.6
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 2.6e-14 83.6 74 59.5
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 2.6e-14 83.6 74 59.5
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 4.4e-14 82.8 100 52.0
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 5.7e-14 82.4 79 59.5
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 5.7e-14 82.4 79 59.5
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 9.8e-14 81.6 107 48.6
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 2.2e-13 80.5 83 55.4
SEGI_28853 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 2.8e-13 80.1 83 54.2
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 3.7e-13 79.7 90 48.9
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 4.8e-13 79.3 79 55.7
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 4.8e-13 79.3 88 52.3
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 6.3e-13 79.0 73 58.9
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 8.3e-13 78.6 73 61.6
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 8.3e-13 78.6 73 61.6
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 7.7e-11 72.0 239 33.5
CBR_g8767 Chara braunii HOM05D006616 ORTHO05D008435 3.2e-09 66.6 90 41.1
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 2.0e-06 57.4 155 31.0
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 2.0e-06 57.4 305 28.5
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 5.7e-06 55.8 291 28.2
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 5.7e-06 55.8 291 28.2


User provided reference genes

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