Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 1.1e-237 826.2 409 100.0
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 2.2e-198 695.7 368 92.7
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 2.1e-193 679.1 370 89.2
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 3.4e-191 671.8 365 88.2
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 4.4e-191 671.4 365 88.5
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 2.1e-188 662.5 361 87.8
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.3e-187 659.8 360 88.1
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 4.7e-185 651.4 365 86.3
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 4.7e-185 651.4 366 86.1
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 8.1e-185 650.6 369 84.6
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 1.4e-184 649.8 367 85.3
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 2.3e-184 649.0 362 86.2
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 3.1e-184 648.7 365 84.9
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 5.2e-184 647.9 360 85.3
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 6.8e-184 647.5 361 84.8
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 8.9e-184 647.1 360 85.8
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 1.2e-183 646.7 388 82.2
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 2.0e-183 646.0 378 81.0
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 2.0e-183 646.0 362 84.3
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 2.0e-183 646.0 364 84.6
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 2.6e-183 645.6 362 84.5
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 5.8e-183 644.4 354 87.0
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 1.3e-182 643.3 364 84.9
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 1.7e-182 642.9 357 87.1
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 2.9e-182 642.1 371 83.0
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 6.4e-182 641.0 365 82.2
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 8.3e-182 640.6 365 84.7
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 8.3e-182 640.6 365 84.7
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 8.3e-182 640.6 360 84.4
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 1.1e-181 640.2 373 82.6
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 1.9e-181 639.4 360 85.3
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 1.9e-181 639.4 359 83.8
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 7.1e-181 637.5 377 81.2
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 1.6e-180 636.3 367 83.7
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 2.1e-180 636.0 360 84.4
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 3.5e-180 635.2 357 84.9
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 3.5e-180 635.2 358 84.1
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 3.5e-180 635.2 357 84.6
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 3.5e-180 635.2 377 81.2
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 6.0e-180 634.4 366 84.4
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 1.0e-179 633.6 361 83.1
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 2.3e-179 632.5 365 83.0
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 3.0e-179 632.1 359 85.0
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 3.9e-179 631.7 353 84.4
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 6.6e-179 630.9 371 81.1
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 6.6e-179 630.9 360 83.9
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 8.6e-179 630.6 359 85.0
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 1.1e-178 630.2 359 83.8
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 1.1e-178 630.2 360 82.8
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 1.1e-178 630.2 357 84.0
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 2.5e-178 629.0 358 84.1
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 2.5e-178 629.0 358 84.1
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 4.3e-178 628.2 366 81.7
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 5.6e-178 627.9 371 80.9
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 7.3e-178 627.5 376 81.1
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 7.3e-178 627.5 367 82.3
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 9.5e-178 627.1 366 82.0
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 1.2e-177 626.7 384 79.4
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 1.2e-177 626.7 361 82.8
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 2.1e-177 625.9 374 80.7
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 2.1e-177 625.9 361 82.8
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 3.6e-177 625.2 366 81.1
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 4.7e-177 624.8 354 84.2
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 8.1e-177 624.0 362 82.0
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 8.1e-177 624.0 360 82.5
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 1.4e-176 623.2 357 82.9
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 1.8e-176 622.9 367 83.1
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 4.0e-176 621.7 365 80.8
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 5.2e-176 621.3 380 79.5
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 5.2e-176 621.3 366 82.2
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 1.2e-175 620.2 366 80.6
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 1.2e-175 620.2 373 79.9
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 1.5e-175 619.8 357 82.1
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 2.0e-175 619.4 363 80.2
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 2.6e-175 619.0 351 83.5
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 3.4e-175 618.6 387 77.8
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 7.6e-175 617.5 438 74.2
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 9.9e-175 617.1 361 82.0
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 3.8e-174 615.1 367 80.1
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 3.8e-174 615.1 363 82.6
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 3.8e-174 615.1 363 80.4
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 4.9e-174 614.8 341 85.6
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 6.4e-174 614.4 380 78.4
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 8.4e-174 614.0 377 79.0
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 3.2e-173 612.1 385 77.1
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 2.7e-172 609.0 368 79.1
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 6.0e-172 607.8 353 80.7
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 6.0e-172 607.8 353 80.7
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 5.1e-171 604.7 366 78.7
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 6.6e-171 604.4 365 79.2
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 1.1e-170 603.6 351 81.8
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 9.6e-170 600.5 367 79.3
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 2.1e-169 599.4 365 78.6
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 2.1e-169 599.4 376 76.6
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 3.1e-168 595.5 366 78.7
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 4.0e-168 595.1 363 78.8
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 5.3e-168 594.7 369 78.6
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 5.3e-168 594.7 363 78.8
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 3.4e-167 592.0 378 74.3
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 9.9e-167 590.5 358 79.3
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 2.9e-166 589.0 365 78.1
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 1.1e-165 587.0 401 72.3
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 7.1e-165 584.3 359 78.6
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 4.6e-164 581.6 380 75.0
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 3.9e-163 578.6 368 76.6
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.5e-162 576.6 364 76.6
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 4.3e-162 575.1 354 76.8
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 6.2e-161 571.2 365 75.9
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 8.1e-161 570.9 364 75.5
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 1.1e-160 570.5 355 79.7
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.8e-160 569.7 354 78.8
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.2e-159 567.0 366 73.0
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 1.5e-159 566.6 369 75.3
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.9e-157 559.7 352 73.6
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 3.9e-155 552.0 354 74.9
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 5.1e-155 551.6 361 74.8
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 9.6e-154 547.4 371 70.9
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 6.2e-153 544.7 303 84.2
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 4.0e-152 542.0 347 73.8
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 2.6e-151 539.3 353 74.2
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 9.9e-151 537.3 361 70.9
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 6.4e-150 534.6 354 71.8
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.2e-148 530.4 353 73.1
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 1.5e-146 523.5 279 87.8
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 1.3e-145 520.4 358 68.7
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 9.0e-144 514.2 361 71.5
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 4.5e-143 511.9 361 71.5
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 3.8e-142 508.8 387 64.6
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 5.1e-139 498.4 290 80.7
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 1.1e-133 480.7 351 65.0
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 1.4e-133 480.3 245 93.1
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 1.2e-132 477.2 359 64.3
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 1.5e-130 470.3 724 41.3
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 7.7e-127 458.0 363 64.2
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 4.7e-124 448.7 310 66.1
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 4.7e-124 448.7 334 61.1
Sed0017389 Sechium edule HOM05D004177 ORTHO05D004826 1.2e-116 424.1 265 76.6
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 4.5e-111 405.6 405 51.9
Nn4g24829 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.8e-107 393.7 237 79.3
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 5.7e-106 388.7 334 59.6
SGA_v2.0_scaffold439G51649 Striga asiatica HOM05D004177 ORTHO05D004826 2.3e-99 366.7 226 77.9
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 4.8e-97 359.0 363 53.7
CBR_g31495 Chara braunii HOM05D004177 ORTHO05D004826 5.9e-95 352.1 251 66.1
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 3.3e-85 319.7 202 76.7
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 4.7e-84 315.8 291 58.4
CAN.G744.9 Capsicum annuum HOM05D004177 ORTHO05D004826 6.0e-55 219.2 138 77.5
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 6.0e-47 192.6 100 92.0
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 6.0e-47 192.6 129 77.5
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 7.9e-47 192.2 127 77.2
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 1.7e-46 191.0 129 77.5
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 1.7e-46 191.0 129 77.5
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 7.3e-45 185.7 105 86.7
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 6.2e-44 182.6 128 74.2
AagrBONN_evm.TU.Sc2ySwM_117.1724 Anthoceros agrestis HOM05D004177 ORTHO05D004826 6.9e-43 179.1 179 51.4
Hund18419 Selenicereus undatus HOM05D004177 ORTHO05D004826 1.1e-40 171.8 111 74.8
HPP92_016662 Vanilla planifolia HOM05D004177 ORTHO05D004826 2.7e-39 167.2 98 78.6
C02p02540 Brassica napus HOM05D001260 ORTHO05D002424 1.1e-35 155.2 156 53.8
HPP92_016663 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.7e-33 147.9 111 63.1
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 1.0e-30 138.7 131 55.0
Oeu039826.4 Olea europaea HOM05D002851 ORTHO05D003084 2.9e-25 120.6 69 85.5
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 2.7e-23 114.0 75 73.3
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 1.5e-21 108.2 64 82.8
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 3.3e-21 107.1 64 78.1
AUR62030112 Chenopodium quinoa HOM05D004177 ORTHO05D004826 3.2e-16 90.5 62 77.4
CDE02G3953 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 4.2e-16 90.1 72 62.5
Nn4g24830 Nelumbo nucifera HOM05D004177 ORTHO05D004826 7.2e-16 89.4 127 45.7
Peaxi162Scf00287g00176 Petunia axillaris HOM05D004177 ORTHO05D004826 1.6e-15 88.2 84 54.8
Pp3c1_32420 Physcomitrium patens HOM05D004177 ORTHO05D004826 2.2e-12 77.8 46 71.7
HanXRQChr13g0409471 Helianthus annuus HOM05D004177 ORTHO05D004826 9.1e-11 72.4 81 53.1
Medtr8g079080 Medicago truncatula HOM05D004177 ORTHO05D004826 1.2e-07 62.0 41 70.7
VMungo0647G1164 Vigna mungo HOM05D004177 ORTHO05D004826 3.9e-06 57.0 31 87.1


User provided reference genes

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