Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 7.2e-107 390.6 195 100.0
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 1.7e-44 183.3 151 63.6
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 5.2e-41 171.8 113 74.3
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 6.8e-41 171.4 111 73.9
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 4.4e-40 168.7 112 70.5
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 1.3e-39 167.2 110 71.8
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 1.7e-39 166.8 110 73.6
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 2.2e-39 166.4 110 70.9
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 2.9e-39 166.0 110 70.0
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 4.9e-39 165.2 110 70.0
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 6.4e-39 164.9 110 70.0
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 1.4e-38 163.7 109 71.6
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 1.4e-38 163.7 110 70.0
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 1.9e-38 163.3 110 70.0
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 1.9e-38 163.3 110 70.9
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 1.9e-38 163.3 111 71.2
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 1.9e-38 163.3 151 57.0
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 2.4e-38 162.9 176 48.9
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 3.2e-38 162.5 109 70.6
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 3.2e-38 162.5 111 71.2
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 5.4e-38 161.8 110 68.2
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 5.4e-38 161.8 111 71.2
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 5.4e-38 161.8 111 71.2
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 5.4e-38 161.8 111 71.2
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 7.1e-38 161.4 157 51.6
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 9.2e-38 161.0 110 70.9
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 9.2e-38 161.0 110 67.3
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 1.6e-37 160.2 110 70.9
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 1.6e-37 160.2 110 69.1
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 1.6e-37 160.2 161 52.2
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 1.6e-37 160.2 112 69.6
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 2.1e-37 159.8 111 72.1
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 2.1e-37 159.8 109 68.8
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 2.1e-37 159.8 110 69.1
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 2.7e-37 159.5 109 68.8
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 3.5e-37 159.1 158 53.8
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 4.6e-37 158.7 160 52.5
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 4.6e-37 158.7 160 52.5
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 4.6e-37 158.7 110 66.4
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 4.6e-37 158.7 110 66.4
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 4.6e-37 158.7 159 54.1
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 4.6e-37 158.7 109 68.8
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 4.6e-37 158.7 109 68.8
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 6.0e-37 158.3 110 66.4
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 6.0e-37 158.3 110 67.3
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 6.0e-37 158.3 111 69.4
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 7.8e-37 157.9 145 55.9
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 1.0e-36 157.5 145 55.9
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 1.0e-36 157.5 145 55.9
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 1.3e-36 157.1 107 70.1
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 1.3e-36 157.1 109 67.0
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 1.7e-36 156.8 157 51.6
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.7e-36 156.8 109 66.1
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 1.7e-36 156.8 123 63.4
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 2.3e-36 156.4 156 55.1
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 2.3e-36 156.4 109 67.9
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 3.0e-36 156.0 110 65.5
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 3.9e-36 155.6 156 54.5
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 3.9e-36 155.6 157 51.6
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 5.1e-36 155.2 137 58.4
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 6.6e-36 154.8 139 57.6
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 6.6e-36 154.8 139 57.6
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 1.9e-35 153.3 111 66.7
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 5.6e-35 151.8 101 67.3
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 5.6e-35 151.8 111 66.7
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 7.3e-35 151.4 170 48.2
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 1.2e-34 150.6 110 63.6
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 2.1e-34 149.8 110 62.7
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 2.1e-34 149.8 100 67.0
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 2.8e-34 149.4 101 75.2
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 2.8e-34 149.4 98 67.3
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 2.8e-34 149.4 98 67.3
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 4.7e-34 148.7 109 64.2
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 4.7e-34 148.7 139 54.7
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 8.1e-34 147.9 111 60.4
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 2.4e-33 146.4 112 62.5
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 4.0e-33 145.6 110 63.6
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 4.0e-33 145.6 112 62.5
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 4.0e-33 145.6 99 67.7
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 1.1e-30 137.5 110 59.1
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 1.1e-30 137.5 100 69.0
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 1.9e-30 136.7 105 65.7
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 3.2e-30 136.0 115 57.4
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 7.8e-29 131.3 106 64.2
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 3.9e-28 129.0 110 56.4
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 1.1e-27 127.5 110 60.0
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 1.9e-27 126.7 110 53.6
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 2.5e-27 126.3 110 57.3
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 2.5e-27 126.3 101 60.4
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 2.5e-27 126.3 101 61.4
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 3.3e-27 125.9 110 53.6
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 7.3e-27 124.8 87 74.7
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 9.6e-27 124.4 87 69.0
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 1.3e-26 124.0 109 56.0
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 3.6e-26 122.5 101 59.4
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 4.8e-26 122.1 110 55.5
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 6.2e-26 121.7 97 59.8
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 2.3e-12 76.6 70 58.6
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 2.6e-08 63.2 52 61.5
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 2.5e-06 56.6 99 30.3
arahy.Tifrunner.gnm1.ann1.2NJ5KY Arachis hypogaea HOM05D007331 ORTHO05D009273 4.2e-06 55.8 78 41.0


User provided reference genes

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