Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_92.g28191 Utricularia gibba HOM05D001156 ORTHO05D001006 3.1e-50 201.4 99 100.0
MSTRG.7600 Avicennia marina HOM05D001156 ORTHO05D001006 5.2e-13 77.8 107 44.9
QL11p013638 Quercus lobata HOM05D001156 ORTHO05D001006 5.2e-13 77.8 108 45.4
ClCG03G004220 Citrullus lanatus HOM05D001156 ORTHO05D001006 2.0e-12 75.9 106 41.5
Haze_06140 Corylus avellana HOM05D001156 ORTHO05D001006 1.7e-11 72.8 107 42.1
Oeu058940.1 Olea europaea HOM05D001156 ORTHO05D001006 2.9e-11 72.0 106 44.3
Sed0024267 Sechium edule HOM05D001156 ORTHO05D001006 2.9e-11 72.0 111 40.5
CANSAT80G1509 Cannabis sativa HOM05D001156 ORTHO05D001006 3.7e-11 71.6 115 39.1
Cfa000678 Carpinus fangiana HOM05D001156 ORTHO05D001006 4.9e-11 71.2 107 41.1
Oeu056050.1 Olea europaea HOM05D001156 ORTHO05D001006 4.9e-11 71.2 105 41.0
Actinidia22420 Actinidia chinensis HOM05D001156 ORTHO05D001006 6.4e-11 70.9 78 55.1
Sabra03G0045500 Salix brachista HOM05D001156 ORTHO05D001006 8.3e-11 70.5 105 41.9
MELO3C002405.2 Cucumis melo HOM05D001156 ORTHO05D001006 1.1e-10 70.1 106 39.6
CiPaw.09G074700 Carya illinoinensis HOM05D001156 ORTHO05D001006 1.9e-10 69.3 106 45.3
Potri.003G074800 Populus trichocarpa HOM05D001156 ORTHO05D001006 2.4e-10 68.9 99 41.4
HanXRQChr12g0355891 Helianthus annuus HOM05D001156 ORTHO05D001006 3.2e-10 68.6 109 39.4
Manes.03G074200 Manihot esculenta HOM05D001156 ORTHO05D001006 3.2e-10 68.6 109 42.2
Rhsim06G0063500 Rhododendron simsii HOM05D001156 ORTHO05D001006 4.1e-10 68.2 106 40.6
Lsat_1_v5_gn_5_99221 Lactuca sativa HOM05D001156 ORTHO05D001006 5.4e-10 67.8 114 37.7
Cc09_g05760 Coffea canephora HOM05D001156 ORTHO05D001006 7.1e-10 67.4 108 38.0
RcHm_v2.0_Chr5g0020611 Rosa chinensis HOM05D001156 ORTHO05D001006 7.1e-10 67.4 112 42.0
Cpa.g.sc33.37 Carica papaya HOM05D001156 ORTHO05D001006 1.2e-09 66.6 101 41.6
CsaV3_1G010160 Cucumis sativus L. HOM05D001156 ORTHO05D001006 1.2e-09 66.6 106 37.7
Duzib248G0830 Durio zibethinus HOM05D001156 ORTHO05D001006 1.2e-09 66.6 57 56.1
TAR626G0967 Trochodendron aralioides HOM05D001156 ORTHO05D001006 1.2e-09 66.6 105 40.0
Duzib132G0565 Durio zibethinus HOM05D001156 ORTHO05D001006 1.6e-09 66.2 56 58.9
Gohir.A03G217800 Gossypium hirsutum HOM05D001156 ORTHO05D001006 1.6e-09 66.2 99 42.4
Gohir.D02G239800 Gossypium hirsutum HOM05D001156 ORTHO05D001006 1.6e-09 66.2 99 42.4
Gorai.005G268200 Gossypium raimondii HOM05D001156 ORTHO05D001006 1.6e-09 66.2 99 42.4
Prupe.4G115200 Prunus persica HOM05D001156 ORTHO05D001006 1.6e-09 66.2 112 39.3
Dinv17478 Davidia involucrata HOM05D001156 ORTHO05D001006 2.1e-09 65.9 110 40.9
CAN.G1492.7 Capsicum annuum HOM05D001156 ORTHO05D001006 2.7e-09 65.5 109 37.6
CiPaw.10G062700 Carya illinoinensis HOM05D001156 ORTHO05D001006 2.7e-09 65.5 104 43.3
BcaB03g15533 Brassica carinata HOM05D001156 ORTHO05D001006 3.5e-09 65.1 96 41.7
Sopen02g010230 Solanum pennellii HOM05D001156 ORTHO05D001006 4.6e-09 64.7 109 39.4
Thhalv10019124m.g Eutrema salsugineum HOM05D001156 ORTHO05D001006 6.0e-09 64.3 102 41.2
TWI15G0681 Tripterygium wilfordii HOM05D001156 ORTHO05D001006 6.0e-09 64.3 111 37.8
FAN16G2237 Fragaria x ananassa HOM05D001156 ORTHO05D001006 7.8e-09 63.9 114 40.4
TWI38G0313 Tripterygium wilfordii HOM05D001156 ORTHO05D001006 7.8e-09 63.9 109 38.5
Nitab4.5_0000138g0090 Nicotiana tabacum HOM05D001156 ORTHO05D001006 1.0e-08 63.5 109 38.5
CSS0047861 Camellia sinensis var. sinensis HOM05D001156 ORTHO05D001006 1.3e-08 63.2 106 36.8
Nitab4.5_0008618g0010 Nicotiana tabacum HOM05D001156 ORTHO05D001006 1.3e-08 63.2 109 38.5
PSO339G1229 Papaver somniferum HOM05D001156 ORTHO05D001006 1.3e-08 63.2 112 36.6
FvH4_3g12640 Fragaria vesca HOM05D001156 ORTHO05D001006 1.7e-08 62.8 112 40.2
FAN21G1329 Fragaria x ananassa HOM05D001156 ORTHO05D001006 1.7e-08 62.8 112 40.2
Hma1.2p1_0327F.1_g126500 Hydrangea macrophylla HOM05D001156 ORTHO05D001006 1.7e-08 62.8 105 37.1
Sp6g12180 Schrenkiella parvula HOM05D001156 ORTHO05D001006 1.7e-08 62.8 57 56.1
Solyc02g031970.1 Solanum lycopersicum HOM05D001156 ORTHO05D001006 1.7e-08 62.8 109 38.5
Peaxi162Scf00556g00055 Petunia axillaris HOM05D001156 ORTHO05D001006 2.3e-08 62.4 112 37.5
Sed0005290 Sechium edule HOM05D001156 ORTHO05D001006 2.3e-08 62.4 105 38.1
Aa31LG4G10710 Aethionema arabicum HOM05D001156 ORTHO05D001006 3.0e-08 62.0 54 59.3
BraA07t30752Z Brassica rapa HOM05D001156 ORTHO05D001006 3.0e-08 62.0 98 38.8
ECA234G3166 Erigeron canadensis HOM05D001156 ORTHO05D001006 3.0e-08 62.0 105 40.0
CARHR063310 Cardamine hirsuta HOM05D001156 ORTHO05D001006 3.9e-08 61.6 99 39.4
PSO384G4824 Papaver somniferum HOM05D001156 ORTHO05D001006 3.9e-08 61.6 112 36.6
A07p31190 Brassica napus HOM05D001156 ORTHO05D001006 6.6e-08 60.8 96 39.6
SGA_v2.0_scaffold175G39352 Striga asiatica HOM05D003927 ORTHO05D004905 6.6e-08 60.8 101 36.6
MD10G1229600 Malus domestica HOM05D001156 ORTHO05D001006 8.6e-08 60.5 111 37.8
Peaxi162Scf00198g00103 Petunia axillaris HOM05D001156 ORTHO05D001006 8.6e-08 60.5 82 45.1
PGSC0003DMG400014931 Solanum tuberosum HOM05D001156 ORTHO05D001006 8.6e-08 60.5 105 38.1
BcaC08g45837 Brassica carinata HOM05D001156 ORTHO05D001006 1.1e-07 60.1 96 39.6
DCAR_004338 Daucus carota HOM05D001156 ORTHO05D001006 1.1e-07 60.1 86 40.7
DCAR_024217 Daucus carota HOM05D001156 ORTHO05D001006 1.1e-07 60.1 86 40.7
HanXRQChr16g0522361 Helianthus annuus HOM05D001156 ORTHO05D001006 1.1e-07 60.1 104 36.5
AL2G29480 Arabidopsis lyrata HOM05D001156 ORTHO05D001006 1.5e-07 59.7 54 51.9
Migut.D01470 Erythranthe guttata HOM05D001156 ORTHO05D001006 1.5e-07 59.7 103 39.8
Migut.N00989 Erythranthe guttata HOM05D001156 ORTHO05D001006 1.5e-07 59.7 103 39.8
Migut.N00990 Erythranthe guttata HOM05D001156 ORTHO05D001006 1.5e-07 59.7 103 39.8
Thhalv10026763m.g Eutrema salsugineum HOM05D001156 ORTHO05D001006 1.5e-07 59.7 103 38.8
Aqoxy3G04261 Aquilegia oxysepala HOM05D001156 ORTHO05D001006 1.9e-07 59.3 109 39.4
Thecc.02G006100 Theobroma cacao HOM05D001156 ORTHO05D001006 1.9e-07 59.3 103 36.9
Eucgr.E04306 Eucalyptus grandis HOM05D001156 ORTHO05D001006 2.5e-07 58.9 53 52.8
THA.LOC104811737 Tarenaya hassleriana HOM05D001156 ORTHO05D001006 2.5e-07 58.9 104 40.4
AT1G70190 Arabidopsis thaliana HOM05D001156 ORTHO05D001006 3.3e-07 58.5 54 51.9
HPP92_027134 Vanilla planifolia HOM05D001156 ORTHO05D001006 3.3e-07 58.5 107 35.5
BolC6t38745H Brassica oleracea HOM05D001156 ORTHO05D001006 4.3e-07 58.2 96 38.5
PGR042G0243 Punica granatum HOM05D001156 ORTHO05D001006 4.3e-07 58.2 110 36.4
FAN25G1424 Fragaria x ananassa HOM05D001156 ORTHO05D001006 5.6e-07 57.8 111 38.7
Lj3g0004919 Lotus japonicus HOM05D001156 ORTHO05D001006 5.6e-07 57.8 105 36.2
GSVIVG01012121001 Vitis vinifera HOM05D001156 ORTHO05D001006 5.6e-07 57.8 57 49.1
Atru.chr10.430 Acer truncatum HOM05D001156 ORTHO05D001006 7.3e-07 57.4 105 36.2
COL.COLO4_17636 Corchorus olitorius HOM05D001156 ORTHO05D001006 7.3e-07 57.4 109 36.7
Psat3g150240 Pisum sativum HOM05D001156 ORTHO05D001006 7.3e-07 57.4 52 53.8
TPR.G29154 Trifolium pratense HOM05D001156 ORTHO05D001006 7.3e-07 57.4 104 38.5
Carub.0002s1688 Capsella rubella HOM05D001156 ORTHO05D001006 9.5e-07 57.0 100 40.0
Medtr7g053520 Medicago truncatula HOM05D001156 ORTHO05D001006 9.5e-07 57.0 105 35.2
Sp5g25310 Schrenkiella parvula HOM05D001156 ORTHO05D001006 9.5e-07 57.0 54 53.7
Phvul.007G244500 Phaseolus vulgaris HOM05D001156 ORTHO05D001006 2.1e-06 55.8 105 35.2
C06p36240 Brassica napus HOM05D001156 ORTHO05D001006 2.8e-06 55.5 96 37.5
PGR119G1972 Punica granatum HOM05D001156 ORTHO05D001006 2.8e-06 55.5 119 35.3
AUR62025583 Chenopodium quinoa HOM05D001156 ORTHO05D001006 8.1e-06 53.9 108 37.0


User provided reference genes

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